BLASTX nr result

ID: Coptis21_contig00028420 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00028420
         (376 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001234492.1| nuclear matrix protein 1 [Solanum lycopersic...   180   1e-43
ref|XP_004133936.1| PREDICTED: uncharacterized protein LOC101219...   179   2e-43
ref|XP_003520414.1| PREDICTED: uncharacterized protein LOC100778...   179   2e-43
ref|XP_003520413.1| PREDICTED: uncharacterized protein LOC100778...   179   2e-43
gb|AFK35804.1| unknown [Medicago truncatula]                          179   3e-43

>ref|NP_001234492.1| nuclear matrix protein 1 [Solanum lycopersicum]
           gi|15077144|gb|AAK83083.1|AF289255_1 nuclear matrix
           protein 1 [Solanum lycopersicum]
          Length = 331

 Score =  180 bits (456), Expect = 1e-43
 Identities = 84/124 (67%), Positives = 101/124 (81%)
 Frame = -2

Query: 372 FADNPEWSIDEQVAKDIQLVDAIAEKQAQIFSEECKLFPADVQIQAIYPLPEIXXXXXXX 193
           +ADNPEWS+DEQVAKDIQL+DAIAEKQ+QIFSEECKLFPADVQIQ+IYPLP+I       
Sbjct: 118 YADNPEWSVDEQVAKDIQLIDAIAEKQSQIFSEECKLFPADVQIQSIYPLPDISDLEKQL 177

Query: 192 XXXXXXXXXXXQVVEDLASKYPYKPDEDYAEVEAELRAHLDSFLETAKSFNLIYNKEIRP 13
                      ++V+DLASK+PY PDE+Y +VEA+LR HL+SFL+TA++FN IY KEIRP
Sbjct: 178 SDQSNRLLSLQEMVDDLASKHPYNPDEEYVDVEAKLRGHLESFLDTARTFNTIYTKEIRP 237

Query: 12  WTHM 1
           WTHM
Sbjct: 238 WTHM 241


>ref|XP_004133936.1| PREDICTED: uncharacterized protein LOC101219290 [Cucumis sativus]
           gi|449480017|ref|XP_004155776.1| PREDICTED:
           uncharacterized protein LOC101227549 [Cucumis sativus]
          Length = 334

 Score =  179 bits (455), Expect = 2e-43
 Identities = 85/124 (68%), Positives = 101/124 (81%)
 Frame = -2

Query: 372 FADNPEWSIDEQVAKDIQLVDAIAEKQAQIFSEECKLFPADVQIQAIYPLPEIXXXXXXX 193
           +ADNP+WS+DEQVAKDIQL+D+IAEKQAQIFSEECKLFPADVQIQ+IYPLP++       
Sbjct: 118 YADNPDWSVDEQVAKDIQLIDSIAEKQAQIFSEECKLFPADVQIQSIYPLPDVSELETKL 177

Query: 192 XXXXXXXXXXXQVVEDLASKYPYKPDEDYAEVEAELRAHLDSFLETAKSFNLIYNKEIRP 13
                      Q V+DLASK+ Y PDE+Y EVE++LRAHL+SFLETA+SFN+IY KEIRP
Sbjct: 178 AEQSKILLNLQQKVDDLASKHAYNPDEEYTEVESQLRAHLESFLETARSFNIIYTKEIRP 237

Query: 12  WTHM 1
           WTHM
Sbjct: 238 WTHM 241


>ref|XP_003520414.1| PREDICTED: uncharacterized protein LOC100778458 isoform 2 [Glycine
           max]
          Length = 300

 Score =  179 bits (454), Expect = 2e-43
 Identities = 86/123 (69%), Positives = 100/123 (81%)
 Frame = -2

Query: 369 ADNPEWSIDEQVAKDIQLVDAIAEKQAQIFSEECKLFPADVQIQAIYPLPEIXXXXXXXX 190
           ADNPEWS+DEQVAKDIQL+D+IAEKQAQIFSEECKLFPADVQIQ+IYPLP++        
Sbjct: 89  ADNPEWSVDEQVAKDIQLIDSIAEKQAQIFSEECKLFPADVQIQSIYPLPDVSELELKFS 148

Query: 189 XXXXXXXXXXQVVEDLASKYPYKPDEDYAEVEAELRAHLDSFLETAKSFNLIYNKEIRPW 10
                     Q V+DLASK+ Y PDE+Y EVE++LRAHL+SFLETA++FNLIY KEIRPW
Sbjct: 149 EQSKILLNLQQKVDDLASKHAYNPDEEYTEVESQLRAHLESFLETARTFNLIYTKEIRPW 208

Query: 9   THM 1
           THM
Sbjct: 209 THM 211


>ref|XP_003520413.1| PREDICTED: uncharacterized protein LOC100778458 isoform 1 [Glycine
           max]
          Length = 330

 Score =  179 bits (454), Expect = 2e-43
 Identities = 86/123 (69%), Positives = 100/123 (81%)
 Frame = -2

Query: 369 ADNPEWSIDEQVAKDIQLVDAIAEKQAQIFSEECKLFPADVQIQAIYPLPEIXXXXXXXX 190
           ADNPEWS+DEQVAKDIQL+D+IAEKQAQIFSEECKLFPADVQIQ+IYPLP++        
Sbjct: 119 ADNPEWSVDEQVAKDIQLIDSIAEKQAQIFSEECKLFPADVQIQSIYPLPDVSELELKFS 178

Query: 189 XXXXXXXXXXQVVEDLASKYPYKPDEDYAEVEAELRAHLDSFLETAKSFNLIYNKEIRPW 10
                     Q V+DLASK+ Y PDE+Y EVE++LRAHL+SFLETA++FNLIY KEIRPW
Sbjct: 179 EQSKILLNLQQKVDDLASKHAYNPDEEYTEVESQLRAHLESFLETARTFNLIYTKEIRPW 238

Query: 9   THM 1
           THM
Sbjct: 239 THM 241


>gb|AFK35804.1| unknown [Medicago truncatula]
          Length = 330

 Score =  179 bits (453), Expect = 3e-43
 Identities = 85/124 (68%), Positives = 100/124 (80%)
 Frame = -2

Query: 372 FADNPEWSIDEQVAKDIQLVDAIAEKQAQIFSEECKLFPADVQIQAIYPLPEIXXXXXXX 193
           +ADNPEWS+DEQVAKDI L+D+IAEKQAQIFSEECKLFPADVQIQ+IYPLPE+       
Sbjct: 118 YADNPEWSVDEQVAKDIHLIDSIAEKQAQIFSEECKLFPADVQIQSIYPLPEVAELESKL 177

Query: 192 XXXXXXXXXXXQVVEDLASKYPYKPDEDYAEVEAELRAHLDSFLETAKSFNLIYNKEIRP 13
                      Q V+DLASK+ Y PDE+Y EVE++LRAHL+SFLETA++FN+IY KEIRP
Sbjct: 178 TEQSKILLNLQQKVDDLASKHAYNPDEEYTEVESQLRAHLESFLETARTFNMIYTKEIRP 237

Query: 12  WTHM 1
           WTHM
Sbjct: 238 WTHM 241


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