BLASTX nr result

ID: Coptis21_contig00028389 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00028389
         (478 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273607.1| PREDICTED: receptor-like protein kinase-like...    77   1e-17
emb|CBI25282.3| unnamed protein product [Vitis vinifera]               77   1e-17
ref|XP_003555482.1| PREDICTED: receptor-like protein kinase-like...    69   2e-14
ref|XP_003535477.1| PREDICTED: receptor-like protein kinase-like...    67   9e-14
tpg|DAA48862.1| TPA: putative leucine-rich repeat receptor-like ...    53   3e-11

>ref|XP_002273607.1| PREDICTED: receptor-like protein kinase-like [Vitis vinifera]
          Length = 1105

 Score = 76.6 bits (187), Expect(2) = 1e-17
 Identities = 41/87 (47%), Positives = 47/87 (54%)
 Frame = +3

Query: 75  NVDGEIVLGLGDCKKLSSLVLSYNRFDGEIPTGLGNCTSLIDFAAVNNXXXXXXXXXXXX 254
           N++G+I LG G CKKL +LVLS N F GEIP GLGNCTSL  FAA+NN            
Sbjct: 247 NLEGKIPLGSGYCKKLDTLVLSMNGFGGEIPPGLGNCTSLSQFAALNNRLSGSIPSSFGL 306

Query: 255 XXXXXXXXXXXXXXXXRIPPEIGNCSS 335
                           +IPPEIG C S
Sbjct: 307 LHKLLLLYLSENHLSGKIPPEIGQCKS 333



 Score = 37.7 bits (86), Expect(2) = 1e-17
 Identities = 16/31 (51%), Positives = 21/31 (67%)
 Frame = +2

Query: 380 PREFGMLQSLRILLLYSNRLSGEFPAVIWTV 472
           P E GML  L+ L L++NRL+GE P  IW +
Sbjct: 349 PSELGMLNELQDLRLFNNRLTGEIPISIWKI 379


>emb|CBI25282.3| unnamed protein product [Vitis vinifera]
          Length = 1036

 Score = 76.6 bits (187), Expect(2) = 1e-17
 Identities = 41/87 (47%), Positives = 47/87 (54%)
 Frame = +3

Query: 75  NVDGEIVLGLGDCKKLSSLVLSYNRFDGEIPTGLGNCTSLIDFAAVNNXXXXXXXXXXXX 254
           N++G+I LG G CKKL +LVLS N F GEIP GLGNCTSL  FAA+NN            
Sbjct: 151 NLEGKIPLGSGYCKKLDTLVLSMNGFGGEIPPGLGNCTSLSQFAALNNRLSGSIPSSFGL 210

Query: 255 XXXXXXXXXXXXXXXXRIPPEIGNCSS 335
                           +IPPEIG C S
Sbjct: 211 LHKLLLLYLSENHLSGKIPPEIGQCKS 237



 Score = 37.7 bits (86), Expect(2) = 1e-17
 Identities = 16/31 (51%), Positives = 21/31 (67%)
 Frame = +2

Query: 380 PREFGMLQSLRILLLYSNRLSGEFPAVIWTV 472
           P E GML  L+ L L++NRL+GE P  IW +
Sbjct: 253 PSELGMLNELQDLRLFNNRLTGEIPISIWKI 283


>ref|XP_003555482.1| PREDICTED: receptor-like protein kinase-like [Glycine max]
          Length = 1082

 Score = 68.6 bits (166), Expect(2) = 2e-14
 Identities = 34/87 (39%), Positives = 45/87 (51%)
 Frame = +3

Query: 75  NVDGEIVLGLGDCKKLSSLVLSYNRFDGEIPTGLGNCTSLIDFAAVNNXXXXXXXXXXXX 254
           N+ G + LG G+CKKLSSL LSYN F G IP+ LGNC+ L++F A  +            
Sbjct: 246 NLGGTVQLGTGNCKKLSSLSLSYNNFSGGIPSSLGNCSGLMEFYAARSNLVGSIPSTLGL 305

Query: 255 XXXXXXXXXXXXXXXXRIPPEIGNCSS 335
                           +IPP+IGNC +
Sbjct: 306 MPNLSLLIIPENLLSGKIPPQIGNCKA 332



 Score = 35.0 bits (79), Expect(2) = 2e-14
 Identities = 16/33 (48%), Positives = 19/33 (57%)
 Frame = +2

Query: 380 PREFGMLQSLRILLLYSNRLSGEFPAVIWTVST 478
           P E G L  LR L LY N L+GE P  IW + +
Sbjct: 348 PSELGNLSKLRDLRLYENLLTGEIPLGIWKIQS 380


>ref|XP_003535477.1| PREDICTED: receptor-like protein kinase-like [Glycine max]
          Length = 1083

 Score = 67.0 bits (162), Expect(2) = 9e-14
 Identities = 35/87 (40%), Positives = 43/87 (49%)
 Frame = +3

Query: 75  NVDGEIVLGLGDCKKLSSLVLSYNRFDGEIPTGLGNCTSLIDFAAVNNXXXXXXXXXXXX 254
           N+ G + LG G CKKLS L +SYN F G IP+ LGNC+ LI+F A  N            
Sbjct: 246 NLGGTVQLGSGYCKKLSILSISYNNFSGGIPSSLGNCSGLIEFYASGNNLVGTIPSTFGL 305

Query: 255 XXXXXXXXXXXXXXXXRIPPEIGNCSS 335
                           +IPP+IGNC S
Sbjct: 306 LPNLSMLFIPENLLSGKIPPQIGNCKS 332



 Score = 34.3 bits (77), Expect(2) = 9e-14
 Identities = 15/33 (45%), Positives = 19/33 (57%)
 Frame = +2

Query: 380 PREFGMLQSLRILLLYSNRLSGEFPAVIWTVST 478
           P E G L  LR L L+ N L+GE P  IW + +
Sbjct: 348 PSELGNLSKLRDLRLFENHLTGEIPLGIWKIQS 380


>tpg|DAA48862.1| TPA: putative leucine-rich repeat receptor-like protein kinase
           family protein [Zea mays]
          Length = 1123

 Score = 53.1 bits (126), Expect(2) = 3e-11
 Identities = 32/84 (38%), Positives = 35/84 (41%)
 Frame = +3

Query: 84  GEIVLGLGDCKKLSSLVLSYNRFDGEIPTGLGNCTSLIDFAAVNNXXXXXXXXXXXXXXX 263
           GEI     DCK L   +LS+N   GEIP+ LGNC SL     VNN               
Sbjct: 247 GEISFSFEDCK-LEIFILSFNNIKGEIPSWLGNCMSLQQLGFVNNSLYGKIPNSLGLLSN 305

Query: 264 XXXXXXXXXXXXXRIPPEIGNCSS 335
                         IPPEIGNC S
Sbjct: 306 LTYLLLSQNSLSGPIPPEIGNCQS 329



 Score = 39.7 bits (91), Expect(2) = 3e-11
 Identities = 17/33 (51%), Positives = 22/33 (66%)
 Frame = +2

Query: 380 PREFGMLQSLRILLLYSNRLSGEFPAVIWTVST 478
           P EF  L+SL  L L+ NRL G+FP  IW++ T
Sbjct: 345 PEEFANLRSLSKLFLFENRLMGDFPENIWSIQT 377


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