BLASTX nr result

ID: Coptis21_contig00028331 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00028331
         (411 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275696.2| PREDICTED: Werner syndrome ATP-dependent hel...   176   2e-42
ref|XP_003537375.1| PREDICTED: LOW QUALITY PROTEIN: Werner syndr...   174   7e-42
ref|XP_003553162.1| PREDICTED: Werner syndrome ATP-dependent hel...   171   4e-41
emb|CBI15784.3| unnamed protein product [Vitis vinifera]              169   2e-40
ref|XP_004165735.1| PREDICTED: Werner syndrome ATP-dependent hel...   168   4e-40

>ref|XP_002275696.2| PREDICTED: Werner syndrome ATP-dependent helicase-like [Vitis
           vinifera]
          Length = 913

 Score =  176 bits (445), Expect = 2e-42
 Identities = 85/136 (62%), Positives = 104/136 (76%)
 Frame = -3

Query: 409 CGESQGIQREAIIESLMAAQKYCLLASCRRKFLLEYFGEKSASSXXXXXXXXXNIKKERD 230
           CGE+ G QR AI++SL+AAQ YCL  +CRRKFLLEYFGEK  S            K+E D
Sbjct: 344 CGEATGNQRRAIMDSLVAAQNYCLQTTCRRKFLLEYFGEKFESDKCGNCDNCTISKRECD 403

Query: 229 MSREVYLLMSCIGSCGGRWGLNMPIDVLRGSRSKKVIENQYDKLPLHGLGKYFSSDCWKA 50
           MSRE +LL++CI SC G WGLNMPID+LRGSRSK++++ ++DKLPLHGLGK  SS+ WKA
Sbjct: 404 MSREAFLLIACINSCRGHWGLNMPIDILRGSRSKRILDAKFDKLPLHGLGKDHSSNWWKA 463

Query: 49  LADQLISKGYLKETMK 2
           LA QLIS GYL E++K
Sbjct: 464 LAYQLISYGYLMESVK 479


>ref|XP_003537375.1| PREDICTED: LOW QUALITY PROTEIN: Werner syndrome ATP-dependent
           helicase homolog [Glycine max]
          Length = 920

 Score =  174 bits (441), Expect = 7e-42
 Identities = 85/136 (62%), Positives = 106/136 (77%), Gaps = 1/136 (0%)
 Frame = -3

Query: 409 CGESQGI-QREAIIESLMAAQKYCLLASCRRKFLLEYFGEKSASSXXXXXXXXXNIKKER 233
           CGE +   QR+AI+ESL+AA++YC+L +CRRKFLLEYFGEK  +            +KER
Sbjct: 349 CGEVKSEKQRKAIMESLLAAERYCVLTTCRRKFLLEYFGEKFPADRCGNCDNCKISRKER 408

Query: 232 DMSREVYLLMSCIGSCGGRWGLNMPIDVLRGSRSKKVIENQYDKLPLHGLGKYFSSDCWK 53
           DMSRE +LLM+CI SC G WGLNMPIDVLRGSRSKK+++ Q+DKLPLHGLGK + ++ WK
Sbjct: 409 DMSREAFLLMACIHSCRGGWGLNMPIDVLRGSRSKKILDVQFDKLPLHGLGKNYPANWWK 468

Query: 52  ALADQLISKGYLKETM 5
           AL  QLIS+GYLKE +
Sbjct: 469 ALGYQLISQGYLKEIL 484


>ref|XP_003553162.1| PREDICTED: Werner syndrome ATP-dependent helicase homolog [Glycine
           max]
          Length = 920

 Score =  171 bits (434), Expect = 4e-41
 Identities = 83/134 (61%), Positives = 105/134 (78%), Gaps = 1/134 (0%)
 Frame = -3

Query: 409 CGESQGI-QREAIIESLMAAQKYCLLASCRRKFLLEYFGEKSASSXXXXXXXXXNIKKER 233
           CG+ +   QR+AI+ESL+AA++YC+L +CRRKFLLEYFGEK  +            +KER
Sbjct: 349 CGDVKSEKQRKAIMESLLAAERYCVLTTCRRKFLLEYFGEKFPADRCGNCDNCKISRKER 408

Query: 232 DMSREVYLLMSCIGSCGGRWGLNMPIDVLRGSRSKKVIENQYDKLPLHGLGKYFSSDCWK 53
           DMSRE +LLM+CI SC G WGLNMPIDVLRGSR+KK+++ Q+DKLPLHGLGK + ++ WK
Sbjct: 409 DMSREAFLLMACIHSCRGIWGLNMPIDVLRGSRAKKILDVQFDKLPLHGLGKNYPANWWK 468

Query: 52  ALADQLISKGYLKE 11
           AL  QLIS+GYLKE
Sbjct: 469 ALRHQLISQGYLKE 482


>emb|CBI15784.3| unnamed protein product [Vitis vinifera]
          Length = 969

 Score =  169 bits (429), Expect = 2e-40
 Identities = 82/135 (60%), Positives = 101/135 (74%)
 Frame = -3

Query: 409 CGESQGIQREAIIESLMAAQKYCLLASCRRKFLLEYFGEKSASSXXXXXXXXXNIKKERD 230
           CGE+ G QR AI++SL+AAQ YCL  +CRRKFLLEYFGEK  S            K+E D
Sbjct: 344 CGEATGNQRRAIMDSLVAAQNYCLQTTCRRKFLLEYFGEKFESDKCGNCDNCTISKRECD 403

Query: 229 MSREVYLLMSCIGSCGGRWGLNMPIDVLRGSRSKKVIENQYDKLPLHGLGKYFSSDCWKA 50
           MSRE +LL++CI SC G WGLNMPID+LRGSRSK++++ ++DKLPLHGLGK  SS+ WKA
Sbjct: 404 MSREAFLLIACINSCRGHWGLNMPIDILRGSRSKRILDAKFDKLPLHGLGKDHSSNWWKA 463

Query: 49  LADQLISKGYLKETM 5
           LA QLIS G + E +
Sbjct: 464 LAYQLISYGTISERL 478


>ref|XP_004165735.1| PREDICTED: Werner syndrome ATP-dependent helicase homolog [Cucumis
           sativus]
          Length = 919

 Score =  168 bits (426), Expect = 4e-40
 Identities = 82/130 (63%), Positives = 100/130 (76%), Gaps = 1/130 (0%)
 Frame = -3

Query: 409 CGESQGI-QREAIIESLMAAQKYCLLASCRRKFLLEYFGEKSASSXXXXXXXXXNIKKER 233
           CGESQ   QR AI ESLMAAQ+YC +A+CRR FLL YFGE+  S            KKER
Sbjct: 344 CGESQTENQRRAIRESLMAAQQYCSIATCRRNFLLGYFGERFHSDKCGNCDNCIVSKKER 403

Query: 232 DMSREVYLLMSCIGSCGGRWGLNMPIDVLRGSRSKKVIENQYDKLPLHGLGKYFSSDCWK 53
           DMS+E +LL++CI SC G+WGLNMP+D+LRGSR+KK+++ Q+DKLPLHGLGK +SS+ WK
Sbjct: 404 DMSKEAFLLLACIQSCRGKWGLNMPVDILRGSRAKKILDTQFDKLPLHGLGKEYSSNWWK 463

Query: 52  ALADQLISKG 23
           ALA QLIS G
Sbjct: 464 ALASQLISNG 473


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