BLASTX nr result

ID: Coptis21_contig00028324 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00028324
         (1118 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282103.1| PREDICTED: uncharacterized protein LOC100252...   415   e-114
emb|CAN71659.1| hypothetical protein VITISV_016184 [Vitis vinifera]   411   e-112
ref|XP_002525436.1| conserved hypothetical protein [Ricinus comm...   404   e-110
ref|XP_002325834.1| predicted protein [Populus trichocarpa] gi|2...   389   e-106
ref|XP_003548753.1| PREDICTED: uncharacterized protein LOC100805...   383   e-104

>ref|XP_002282103.1| PREDICTED: uncharacterized protein LOC100252010 [Vitis vinifera]
            gi|297739753|emb|CBI29935.3| unnamed protein product
            [Vitis vinifera]
          Length = 355

 Score =  415 bits (1067), Expect = e-114
 Identities = 221/357 (61%), Positives = 257/357 (71%), Gaps = 6/357 (1%)
 Frame = +3

Query: 33   ASLLSFPLPNPKLNSIKXXXXXXXXXXXXXXXXXXLDEKFGRKGIKFTDSGNV---EMTV 203
            +SLLSF LP  K N IK                  LD+KFGRKGIKF +SGNV   E+TV
Sbjct: 3    SSLLSFSLP--KSNLIKACSSPPTATSTLSIPDT-LDQKFGRKGIKFLESGNVPLVELTV 59

Query: 204  RNGSSLSLQISNGHVTSYKPKVYWQDDEFEEVLYTVPGELDSM---KGGIGLVLNEVSET 374
            RNGSSL L+I +G VTSYKPKV W+DD FEEVLYT+P         KGGIGLV+N+VS+ 
Sbjct: 60   RNGSSLRLRIPDGLVTSYKPKVNWKDDGFEEVLYTLPAAASDSTKPKGGIGLVINDVSDP 119

Query: 375  NSKGTPVCTXXXXXXXXXXXXXXALQVELNCTCGTLDVTYIVSLYPLSMATAVVVQNNGN 554
             SK +P+ T              ALQVEL+CT GTLD+TY+VSLYP SMATAV+V NNG 
Sbjct: 120  ASKLSPLSTEWAVKDVDSDAID-ALQVELSCTSGTLDITYVVSLYPESMATAVLVNNNGR 178

Query: 555  KAVNLTSAMLSYLKFKGRGGSAIRGFKDCSYCIHPPLSSRFELLSPVEAMEPEPLGWFSF 734
            K V+LTSAMLS+ KFK RGG+A++G K CSYC HPPLSS FE+LSP EAM+ E  GWFSF
Sbjct: 179  KPVSLTSAMLSHFKFKRRGGAAVQGLKGCSYCSHPPLSSPFEILSPAEAMKTESPGWFSF 238

Query: 735  SEPENVIPGSWTTEKQLYSVLKNKMSRVYAAPPMERLKRSYRTPPSKYETIDQGKGLEYR 914
                    GSWT +   Y +LKNK+SRVY  PP ERLK  Y TPPSKYETIDQG+ L +R
Sbjct: 239  DSESEKKRGSWTVQDDPYIILKNKLSRVYTTPPTERLKEFYDTPPSKYETIDQGRELFFR 298

Query: 915  LIRMGYEDIYVSSPGSSSQKFGDGYFICTGPASMLVPVIVNPGEEWRGAQVIEHDNL 1085
            +IR+GYEDIY+SSPGS S+K+G  YFICTGPAS+LVPV+VNPGE WR AQVIEHDNL
Sbjct: 299  VIRIGYEDIYLSSPGSLSEKYGKDYFICTGPASILVPVVVNPGEGWRAAQVIEHDNL 355


>emb|CAN71659.1| hypothetical protein VITISV_016184 [Vitis vinifera]
          Length = 754

 Score =  411 bits (1056), Expect = e-112
 Identities = 210/321 (65%), Positives = 244/321 (76%), Gaps = 6/321 (1%)
 Frame = +3

Query: 138  LDEKFGRKGIKFTDSGNV---EMTVRNGSSLSLQISNGHVTSYKPKVYWQDDEFEEVLYT 308
            LD+KFGRKGIKF +SGNV   E+TVRNGSSL L+I +G VTSYKPKV W+DD FEEVLYT
Sbjct: 84   LDQKFGRKGIKFLESGNVPLVELTVRNGSSLRLRIPDGLVTSYKPKVNWKDDGFEEVLYT 143

Query: 309  VPGELDSM---KGGIGLVLNEVSETNSKGTPVCTXXXXXXXXXXXXXXALQVELNCTCGT 479
            +P         KGGIGLV+N+VS+  SK +P+ T              ALQVEL+CT GT
Sbjct: 144  LPAAASDSTKPKGGIGLVINDVSDPASKLSPLSTEWAVKDVDSDAID-ALQVELSCTSGT 202

Query: 480  LDVTYIVSLYPLSMATAVVVQNNGNKAVNLTSAMLSYLKFKGRGGSAIRGFKDCSYCIHP 659
            LD+TY+VSLYP SMATAV+V NNG K V+LTSAMLS+ KFK RGG+AI+G K CSYC HP
Sbjct: 203  LDITYVVSLYPESMATAVLVNNNGRKPVSLTSAMLSHFKFKRRGGAAIQGLKGCSYCSHP 262

Query: 660  PLSSRFELLSPVEAMEPEPLGWFSFSEPENVIPGSWTTEKQLYSVLKNKMSRVYAAPPME 839
            PLSS FE+LSP EAM+ E  GWFSF        GSWT +   Y +LKNK+SRVY  PP E
Sbjct: 263  PLSSPFEILSPAEAMKTESPGWFSFDSESEKKRGSWTIQDDPYIILKNKLSRVYTTPPTE 322

Query: 840  RLKRSYRTPPSKYETIDQGKGLEYRLIRMGYEDIYVSSPGSSSQKFGDGYFICTGPASML 1019
            RLK  Y TPPSKYETIDQG+ L +R+IR+GYEDIY+SSPGS S+K+G  YFICTGPAS+L
Sbjct: 323  RLKEFYDTPPSKYETIDQGRELFFRVIRIGYEDIYLSSPGSFSEKYGKDYFICTGPASIL 382

Query: 1020 VPVIVNPGEEWRGAQVIEHDN 1082
            VPV+VNPGE WR AQVIEHDN
Sbjct: 383  VPVVVNPGEGWRAAQVIEHDN 403



 Score = 96.7 bits (239), Expect = 9e-18
 Identities = 85/334 (25%), Positives = 153/334 (45%), Gaps = 18/334 (5%)
 Frame = +3

Query: 138  LDEKFGRKGIKFTDSGN---VEMTVRNGSSLSLQISNGHVTSYKPKVYWQDDEFEEVLYT 308
            L+ +F   G+ F   G+   V+M + NGS  SL + +G +TSYK  + W      EVL+T
Sbjct: 427  LETQFSGHGVTFEGIGDSYVVKMGLENGSLASLMLPSGLITSYKAPM-WHGGTL-EVLHT 484

Query: 309  VPGELDS---MKGGIGLVLNEVSETNSKGTPVCTXXXXXXXXXXXXXXALQVEL--NCTC 473
               E DS   ++GG+ L L   S+     +P                  +QVE+  + + 
Sbjct: 485  TVTEEDSGAVIQGGVSLALECESDGGISWSP---SSWILQDVRGNAEELIQVEMVSSDSE 541

Query: 474  GTLDVTYIVSLYPLSMATAVVVQNNGNKAVNLTSAMLSYLKFKGRGGSAIRGFKDCSYCI 653
               +  YIV+L    +++ +V+ N  +  + LT +++S+L       +   G +  ++  
Sbjct: 542  NMAEAKYIVTLQQDIISSEIVISNLKSLPLQLTGSVISHLTVSNLDATYAIGLEGSNFFS 601

Query: 654  HPPLSSRFELLSPVEAMEPEPLGWFSFSEP--ENVIPGS----WTTEKQLYSVLKNKMSR 815
              P  S F L+ P    + E      + +P     + GS         Q+  + K +M  
Sbjct: 602  RTPFLSNFGLIPPDFGQKNEVGSSQLWGQPGIRRFLSGSNAKNQNNADQVERIKKEEMEG 661

Query: 816  V----YAAPPMERLKRSYRTPPSKYETIDQGKGLEYRLIRMGYEDIYVSSPGSSSQKFGD 983
                 Y     E + R Y + P  +  ID+G+     + R G++++Y+ SPGS+ + +  
Sbjct: 662  EEEDNYKQLSSE-MSRIYTSAPRNFTVIDRGRRNSVVVGRDGFKELYMFSPGSTHECYSK 720

Query: 984  GYFICTGPASMLVPVIVNPGEEWRGAQVIEHDNL 1085
              +IC G +++L P+I+ P + WRG Q + + NL
Sbjct: 721  YTYICVGQSAVLKPIILGPEDVWRGGQHLHNPNL 754


>ref|XP_002525436.1| conserved hypothetical protein [Ricinus communis]
            gi|223535249|gb|EEF36926.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 353

 Score =  404 bits (1037), Expect = e-110
 Identities = 212/358 (59%), Positives = 257/358 (71%), Gaps = 6/358 (1%)
 Frame = +3

Query: 30   MASLLSFPLPNPKLNSIKXXXXXXXXXXXXXXXXXXLDEKFGRKGIKFTDSGNV---EMT 200
            MASLLS  LP P +                      L+EKFGRKGIKF +S N+   E+T
Sbjct: 1    MASLLSLSLPKPTI----IKATSSTTTTTTLPSPDVLEEKFGRKGIKFLESNNIPIAELT 56

Query: 201  VRNGSSLSLQISNGHVTSYKPKVYWQDDEFEEVLYTVPGELDSMK--GGIGLVLNEVSET 374
            VRNGSSL LQI + HVTSYKPKVYW+DD F E+LYTVPG+  S K  GGIGLV+N+ S++
Sbjct: 57   VRNGSSLRLQIPDAHVTSYKPKVYWKDDGFHEILYTVPGKDSSSKARGGIGLVINDASDS 116

Query: 375  NSKGTPVCTXXXXXXXXXXXXXXALQVELNCTCGTLDVTYIVSLYPLSMATAVVVQNNGN 554
             SKG+ +                ALQVEL CT GTLD++YIVSLYP SMATAV+V+NNG 
Sbjct: 117  GSKGSLITNSEWTVKDVDSDAIDALQVELGCTSGTLDISYIVSLYPESMATAVIVKNNGR 176

Query: 555  KAVNLTSAMLSYLKFKGRGGSAIRGFKDCSYCIHPPLSSRFELLSPVEAMEPEPLGWFSF 734
            K V LTSA+LS+LKFK R  +A++GF+ CSY  HPPLSS FE+LSP EAM+ E  G F F
Sbjct: 177  KPVTLTSAILSHLKFKRRQKAAVQGFRGCSYLPHPPLSSPFEILSPGEAMKSESPGLFDF 236

Query: 735  S-EPENVIPGSWTTEKQLYSVLKNKMSRVYAAPPMERLKRSYRTPPSKYETIDQGKGLEY 911
            S EPE+ + G W  +   +++LKNK SR+YAAPP ERLK  Y TPPSKYET+DQG  L +
Sbjct: 237  SSEPEDKL-GIWGVQDVPFTILKNKFSRIYAAPPQERLKAFYNTPPSKYETLDQGLELFF 295

Query: 912  RLIRMGYEDIYVSSPGSSSQKFGDGYFICTGPASMLVPVIVNPGEEWRGAQVIEHDNL 1085
            R+IRMG+ED Y+ SPGS S+K+G+ YFICTGPA+M+VPVIV PGE+WRGAQVIEHDNL
Sbjct: 296  RVIRMGFEDTYMGSPGSLSEKYGEEYFICTGPAAMIVPVIVKPGEDWRGAQVIEHDNL 353


>ref|XP_002325834.1| predicted protein [Populus trichocarpa] gi|222862709|gb|EEF00216.1|
            predicted protein [Populus trichocarpa]
          Length = 355

 Score =  389 bits (998), Expect = e-106
 Identities = 203/360 (56%), Positives = 257/360 (71%), Gaps = 8/360 (2%)
 Frame = +3

Query: 30   MASLLSFPLPNPKLNSIKXXXXXXXXXXXXXXXXXXLDEKFGRKGIKFTDSGNV---EMT 200
            MASLLSF L  P +                      L+EKFGRKGIKF +S NV   E+ 
Sbjct: 1    MASLLSFSLRKPSI----IKATSLSPTTTSPSTPEVLEEKFGRKGIKFLESNNVPTVELK 56

Query: 201  VRNGSSLSLQISNGHVTSYKPKVYWQDDEFEEVLYTVPG-ELDSM---KGGIGLVLNEVS 368
            VRNGSS+ +QI N +V+SYKPKVYW+DD FEEVLYT+PG E DS    KGGIGLV+N+ S
Sbjct: 57   VRNGSSVRVQIPNAYVSSYKPKVYWKDDGFEEVLYTLPGKEKDSSGIAKGGIGLVINDAS 116

Query: 369  ETNSKGTPVCTXXXXXXXXXXXXXXALQVELNCTCGTLDVTYIVSLYPLSMATAVVVQNN 548
            E  SKG+ + +              A+QVEL+C+ G L+++Y+VSLYPLSMA+AV+V+NN
Sbjct: 117  EGGSKGSLISSSEWTVKDVDSDSIDAVQVELSCSSGPLEISYVVSLYPLSMASAVIVKNN 176

Query: 549  GNKAVNLTSAMLSYLKFKGRGGSAIRGFKDCSYCIHPPLSSRFELLSPVEAMEPEPLGWF 728
            G K V LTSA+LS+LKFK R  + I+G + C YC  PPLSS FE+LSP EA++PE  G  
Sbjct: 177  GRKDVTLTSAILSHLKFKKRAKAGIQGLRKCYYCTQPPLSSPFEVLSPSEALKPESPGLL 236

Query: 729  SFS-EPENVIPGSWTTEKQLYSVLKNKMSRVYAAPPMERLKRSYRTPPSKYETIDQGKGL 905
             F  EPE   PGSW  +++ Y +LK+++SRVYAAPP ERLK  Y T P+KYET+DQGK L
Sbjct: 237  DFDFEPEEK-PGSWKVQEEPYIILKDRLSRVYAAPPQERLKAFYNTSPTKYETLDQGKEL 295

Query: 906  EYRLIRMGYEDIYVSSPGSSSQKFGDGYFICTGPASMLVPVIVNPGEEWRGAQVIEHDNL 1085
             +R+IR+G+EDIY+ SPGS ++K+G  YFICTGPA+MLVPV+V PGEEW+GAQ+IEHDNL
Sbjct: 296  FFRVIRIGFEDIYIGSPGSFAEKYGKDYFICTGPAAMLVPVVVKPGEEWKGAQMIEHDNL 355


>ref|XP_003548753.1| PREDICTED: uncharacterized protein LOC100805680 [Glycine max]
          Length = 359

 Score =  383 bits (983), Expect = e-104
 Identities = 201/358 (56%), Positives = 242/358 (67%), Gaps = 6/358 (1%)
 Frame = +3

Query: 30   MASLLSFPLPNPKLNSIKXXXXXXXXXXXXXXXXXXLDEKFGRKGIKFTDSGN---VEMT 200
            MAS LS  LP   L                      L+EKFGRKGIKF +S N   V++T
Sbjct: 1    MASFLSLSLPKLNLIKASSAANTTTTTTTTLPTAETLNEKFGRKGIKFLESDNTPIVDLT 60

Query: 201  VRNGSSLSLQISNGHVTSYKPKVYWQDDEFEEVLYTVPGELDS---MKGGIGLVLNEVSE 371
            VRNGSSL L+I + HVTSYKPKV W+DD F+EVLYT+P         KGG+GLV+NEV +
Sbjct: 61   VRNGSSLRLRIPDAHVTSYKPKVNWKDDGFQEVLYTIPATETGPYKAKGGVGLVMNEVLQ 120

Query: 372  TNSKGTPVCTXXXXXXXXXXXXXXALQVELNCTCGTLDVTYIVSLYPLSMATAVVVQNNG 551
              +KG    T              ALQVEL+CT    D+TYIV+LYP+SMATAVV +N G
Sbjct: 121  PGAKGLLPSTLEWTVNDVDSDSIDALQVELSCTSRFFDITYIVTLYPVSMATAVVAKNIG 180

Query: 552  NKAVNLTSAMLSYLKFKGRGGSAIRGFKDCSYCIHPPLSSRFELLSPVEAMEPEPLGWFS 731
             K   LT+A+LS+ +FK R G+AI+G + CSY  H PLSS F++L+P EA   EP  W S
Sbjct: 181  PKPATLTNAILSHFRFKNRRGTAIKGLRSCSYIPHAPLSSPFQILTPSEATISEPPRWLS 240

Query: 732  FSEPENVIPGSWTTEKQLYSVLKNKMSRVYAAPPMERLKRSYRTPPSKYETIDQGKGLEY 911
            F       PG+W  +    ++L+NKMSRVYAAPP ERLK  Y TPPSKYETIDQG+GL +
Sbjct: 241  FGNETEAKPGTWGQQALSITLLENKMSRVYAAPPKERLKAFYNTPPSKYETIDQGRGLCF 300

Query: 912  RLIRMGYEDIYVSSPGSSSQKFGDGYFICTGPASMLVPVIVNPGEEWRGAQVIEHDNL 1085
            R+IRMG+EDIY+SSPGS S+K+G  YFICTGPAS+LVPV VNPGEEWRGAQVIEHDNL
Sbjct: 301  RVIRMGFEDIYLSSPGSLSEKYGKDYFICTGPASILVPVTVNPGEEWRGAQVIEHDNL 358


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