BLASTX nr result

ID: Coptis21_contig00028312 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00028312
         (687 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004142070.1| PREDICTED: actin-like [Cucumis sativus] gi|4...   276   3e-72
ref|XP_004136568.1| PREDICTED: actin-like [Cucumis sativus] gi|4...   276   3e-72
gb|ADK20401.1| actin [Citrus maxima]                                  276   3e-72
gb|AFP43696.1| actin4, partial [Eriobotrya japonica]                  276   3e-72
gb|AFP43694.1| actin 2, partial [Eriobotrya japonica]                 276   3e-72

>ref|XP_004142070.1| PREDICTED: actin-like [Cucumis sativus]
           gi|449516439|ref|XP_004165254.1| PREDICTED: actin-like
           [Cucumis sativus]
          Length = 377

 Score =  276 bits (706), Expect = 3e-72
 Identities = 136/138 (98%), Positives = 136/138 (98%)
 Frame = +3

Query: 3   KSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYSNT 182
           KSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLY N 
Sbjct: 240 KSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNI 299

Query: 183 VLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWI 362
           VLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWI
Sbjct: 300 VLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWI 359

Query: 363 AKAEYDESGPSIVHRKCF 416
           AKAEYDESGPSIVHRKCF
Sbjct: 360 AKAEYDESGPSIVHRKCF 377


>ref|XP_004136568.1| PREDICTED: actin-like [Cucumis sativus]
           gi|449511328|ref|XP_004163927.1| PREDICTED: actin-like
           [Cucumis sativus]
          Length = 377

 Score =  276 bits (706), Expect = 3e-72
 Identities = 136/138 (98%), Positives = 136/138 (98%)
 Frame = +3

Query: 3   KSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYSNT 182
           KSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLY N 
Sbjct: 240 KSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNI 299

Query: 183 VLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWI 362
           VLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWI
Sbjct: 300 VLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWI 359

Query: 363 AKAEYDESGPSIVHRKCF 416
           AKAEYDESGPSIVHRKCF
Sbjct: 360 AKAEYDESGPSIVHRKCF 377


>gb|ADK20401.1| actin [Citrus maxima]
          Length = 377

 Score =  276 bits (706), Expect = 3e-72
 Identities = 136/138 (98%), Positives = 136/138 (98%)
 Frame = +3

Query: 3   KSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYSNT 182
           KSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLY N 
Sbjct: 240 KSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNI 299

Query: 183 VLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWI 362
           VLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWI
Sbjct: 300 VLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWI 359

Query: 363 AKAEYDESGPSIVHRKCF 416
           AKAEYDESGPSIVHRKCF
Sbjct: 360 AKAEYDESGPSIVHRKCF 377


>gb|AFP43696.1| actin4, partial [Eriobotrya japonica]
          Length = 174

 Score =  276 bits (706), Expect = 3e-72
 Identities = 136/138 (98%), Positives = 136/138 (98%)
 Frame = +3

Query: 3   KSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYSNT 182
           KSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLY N 
Sbjct: 37  KSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNI 96

Query: 183 VLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWI 362
           VLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWI
Sbjct: 97  VLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWI 156

Query: 363 AKAEYDESGPSIVHRKCF 416
           AKAEYDESGPSIVHRKCF
Sbjct: 157 AKAEYDESGPSIVHRKCF 174


>gb|AFP43694.1| actin 2, partial [Eriobotrya japonica]
          Length = 174

 Score =  276 bits (706), Expect = 3e-72
 Identities = 136/138 (98%), Positives = 136/138 (98%)
 Frame = +3

Query: 3   KSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYSNT 182
           KSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLY N 
Sbjct: 37  KSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNI 96

Query: 183 VLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWI 362
           VLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWI
Sbjct: 97  VLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWI 156

Query: 363 AKAEYDESGPSIVHRKCF 416
           AKAEYDESGPSIVHRKCF
Sbjct: 157 AKAEYDESGPSIVHRKCF 174


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