BLASTX nr result

ID: Coptis21_contig00028310 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00028310
         (376 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAY84145.1| late embryogenesis abundant protein [Catharanthus...    93   2e-17
ref|NP_001238798.1| late embryogenesis abundant protein [Solanum...    88   6e-16
gb|ADY17817.1| LEA5 [Vitis amurensis]                                  87   1e-15
emb|CAN61339.1| hypothetical protein VITISV_025029 [Vitis vinifera]    87   2e-15
ref|XP_002285360.1| PREDICTED: late embryogenesis abundant prote...    85   5e-15

>gb|AAY84145.1| late embryogenesis abundant protein [Catharanthus roseus]
          Length = 163

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 55/131 (41%), Positives = 70/131 (53%), Gaps = 22/131 (16%)
 Frame = +2

Query: 41  GDHDEKAGQMMGGVRDXXXXXXXXXXXTAQTA----------------------KDKVSG 154
           G   EK GQMMG V++           TAQ+A                      KDK+S 
Sbjct: 15  GQAQEKTGQMMGDVKEKTQQAKDKASETAQSAQGRAQEKKDQTGSYVSDKAGAAKDKLSE 74

Query: 155 TTQATKDKTSDGTRAAGDRARESAQSARDTAEAGKEKTGGIVQGTVENVKNMAAGAAEAV 334
           TTQ+ K++ S    A   +A E AQS ++TAEAGKEKTGG +Q T E VK MA GAA+AV
Sbjct: 75  TTQSAKERASGAAEATKQKASEMAQSGKETAEAGKEKTGGFLQKTGEQVKGMAQGAADAV 134

Query: 335 KQTLGMGGNQD 367
           K T GM  +++
Sbjct: 135 KHTFGMAESEE 145


>ref|NP_001238798.1| late embryogenesis abundant protein [Solanum lycopersicum]
           gi|302777019|gb|ADL70200.1| late embryogenesis abundant
           protein [Solanum lycopersicum]
          Length = 171

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 42/83 (50%), Positives = 58/83 (69%)
 Frame = +2

Query: 125 AQTAKDKVSGTTQATKDKTSDGTRAAGDRARESAQSARDTAEAGKEKTGGIVQGTVENVK 304
           AQ  KDK SG  QATK+K S   +A  ++A E  +SA++TA+AG+EK GGI+Q T + V+
Sbjct: 79  AQATKDKTSGAAQATKEKASGAAQATKEKASEMMESAKETAQAGEEKAGGILQQTGQQVR 138

Query: 305 NMAAGAAEAVKQTLGMGGNQDDP 373
           ++A GAA+AVK T GM    +DP
Sbjct: 139 SIAQGAADAVKHTFGMADTDEDP 161


>gb|ADY17817.1| LEA5 [Vitis amurensis]
          Length = 156

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 50/106 (47%), Positives = 61/106 (57%), Gaps = 22/106 (20%)
 Frame = +2

Query: 122 TAQTAKDKVSGTTQ----------------------ATKDKTSDGTRAAGDRARESAQSA 235
           TAQ AKDK + T Q                      A K+K    T A  ++A E  +S 
Sbjct: 49  TAQHAKDKTADTAQQAKGRTQESKDQSGGYLSEKAGAAKEKALGATEATKEKASEMVESG 108

Query: 236 RDTAEAGKEKTGGIVQGTVENVKNMAAGAAEAVKQTLGMGGNQDDP 373
           R+TAEAGK+KTGGI+Q T E VK+MA GAA+AVKQT GM GN+D P
Sbjct: 109 RETAEAGKDKTGGILQTTGERVKDMAQGAADAVKQTFGMAGNEDRP 154


>emb|CAN61339.1| hypothetical protein VITISV_025029 [Vitis vinifera]
          Length = 380

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 49/106 (46%), Positives = 61/106 (57%), Gaps = 22/106 (20%)
 Frame = +2

Query: 122 TAQTAKDKVSGTTQATKDKTSDG----------------------TRAAGDRARESAQSA 235
           TAQ AKDK + T Q TK +T +                       T A  ++A E  +S 
Sbjct: 273 TAQHAKDKTADTAQQTKGRTQESKDQSGGYLSEKAGAAKEKALGATEATKEKASEMVESG 332

Query: 236 RDTAEAGKEKTGGIVQGTVENVKNMAAGAAEAVKQTLGMGGNQDDP 373
           R+TAEAGK+K+GGI+Q T E VK MA GAA+AVKQT GM GN+D P
Sbjct: 333 RETAEAGKDKSGGILQTTGERVKGMAQGAADAVKQTFGMAGNEDRP 378


>ref|XP_002285360.1| PREDICTED: late embryogenesis abundant protein Dc3 isoform 1 [Vitis
           vinifera] gi|297743398|emb|CBI36265.3| unnamed protein
           product [Vitis vinifera]
          Length = 156

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 48/106 (45%), Positives = 60/106 (56%), Gaps = 22/106 (20%)
 Frame = +2

Query: 122 TAQTAKDKVSGTTQATKDKTSDG----------------------TRAAGDRARESAQSA 235
           TAQ AKDK + T Q  K +T +                       T A  ++A E  +S 
Sbjct: 49  TAQHAKDKTADTAQQAKGRTQESKDQSGGYLSEKAGAAKEKALGVTEATKEKASEMVESG 108

Query: 236 RDTAEAGKEKTGGIVQGTVENVKNMAAGAAEAVKQTLGMGGNQDDP 373
           R+TAEAGK+KTGGI+Q T E VK MA GAA+A+KQT GM GN+D P
Sbjct: 109 RETAEAGKDKTGGILQTTGERVKGMAQGAADAMKQTFGMAGNEDRP 154


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