BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00028300
         (535 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003526270.1| PREDICTED: putative E3 ubiquitin-protein lig...   126   2e-27
ref|XP_002863599.1| predicted protein [Arabidopsis lyrata subsp....   124   9e-27
ref|NP_199241.2| putative E3 ubiquitin-protein ligase RING1a [Ar...   124   9e-27
dbj|BAB10113.1| unnamed protein product [Arabidopsis thaliana]        124   9e-27
ref|XP_003539538.1| PREDICTED: putative E3 ubiquitin-protein lig...   123   1e-26

>ref|XP_003526270.1| PREDICTED: putative E3 ubiquitin-protein ligase RING1a-like
           [Glycine max]
          Length = 455

 Score =  126 bits (317), Expect = 2e-27
 Identities = 56/125 (44%), Positives = 89/125 (71%)
 Frame = +3

Query: 42  QHRS*YMDIDLATIKPHLTCPICLGIFQQAQVVTLCFHRFCKECINKSMRVGNRQCPTCR 221
           + +S Y+ ++L  I+  + CPICLGI ++ + V  C HRFC+ECI+KSMR+GN +CP CR
Sbjct: 64  EDKSEYVFVELLEIRKEVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACR 123

Query: 222 KVLPSRRFLREDHLCNRLVAALYPNMNSSWQEDVELTDEEKAQTEQIQAAFAEMIRKQAK 401
               SRR LR+D   + L+AALYPN+    QE++E  +E+K + +QIQA+ A+++++Q++
Sbjct: 124 THCASRRSLRDDPNYDALIAALYPNIEKYEQEELEFREEDKNRNKQIQASIAKVVQRQSE 183

Query: 402 AIPNR 416
           A+  R
Sbjct: 184 ALVKR 188


>ref|XP_002863599.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297309434|gb|EFH39858.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 516

 Score =  124 bits (311), Expect = 9e-27
 Identities = 56/123 (45%), Positives = 89/123 (72%)
 Frame = +3

Query: 48  RS*YMDIDLATIKPHLTCPICLGIFQQAQVVTLCFHRFCKECINKSMRVGNRQCPTCRKV 227
           +S +M+IDL  I+  + CPICLGI ++ + V  C HRFC+ECI+KSMR+GN +CP CRK 
Sbjct: 114 QSEFMEIDLGEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRKH 173

Query: 228 LPSRRFLREDHLCNRLVAALYPNMNSSWQEDVELTDEEKAQTEQIQAAFAEMIRKQAKAI 407
             SRR LR+D   + L+AAL+ N++S  +E++   ++E A+ +QIQA+ A++ ++Q++A+
Sbjct: 174 CASRRSLRDDPKFDALIAALFTNIDSYEEEELAFHEDEMARNKQIQASIAQISQRQSEAL 233

Query: 408 PNR 416
             R
Sbjct: 234 VKR 236


>ref|NP_199241.2| putative E3 ubiquitin-protein ligase RING1a [Arabidopsis thaliana]
           gi|302425246|sp|Q9FKW0.2|RNG1A_ARATH RecName:
           Full=Putative E3 ubiquitin-protein ligase RING1a;
           AltName: Full=Polycomb complex protein RING1a; AltName:
           Full=Protein RING1a; Short=AtRING1a; AltName: Full=Ring
           finger protein 434 gi|332007702|gb|AED95085.1| putative
           E3 ubiquitin-protein ligase RING1a [Arabidopsis
           thaliana]
          Length = 522

 Score =  124 bits (311), Expect = 9e-27
 Identities = 56/123 (45%), Positives = 89/123 (72%)
 Frame = +3

Query: 48  RS*YMDIDLATIKPHLTCPICLGIFQQAQVVTLCFHRFCKECINKSMRVGNRQCPTCRKV 227
           +S +M+IDL  I+  + CPICLGI ++ + V  C HRFC+ECI+KSMR+GN +CP CRK 
Sbjct: 119 QSEFMEIDLGEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRKH 178

Query: 228 LPSRRFLREDHLCNRLVAALYPNMNSSWQEDVELTDEEKAQTEQIQAAFAEMIRKQAKAI 407
             SRR LR+D   + L+AAL+ N++S  +E++   ++E A+ +QIQA+ A++ ++Q++A+
Sbjct: 179 CASRRSLRDDPKFDALIAALFTNIDSYEEEELAFHEDEMARNKQIQASIAQISQRQSEAL 238

Query: 408 PNR 416
             R
Sbjct: 239 VKR 241


>dbj|BAB10113.1| unnamed protein product [Arabidopsis thaliana]
          Length = 486

 Score =  124 bits (311), Expect = 9e-27
 Identities = 56/123 (45%), Positives = 89/123 (72%)
 Frame = +3

Query: 48  RS*YMDIDLATIKPHLTCPICLGIFQQAQVVTLCFHRFCKECINKSMRVGNRQCPTCRKV 227
           +S +M+IDL  I+  + CPICLGI ++ + V  C HRFC+ECI+KSMR+GN +CP CRK 
Sbjct: 119 QSEFMEIDLGEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRKH 178

Query: 228 LPSRRFLREDHLCNRLVAALYPNMNSSWQEDVELTDEEKAQTEQIQAAFAEMIRKQAKAI 407
             SRR LR+D   + L+AAL+ N++S  +E++   ++E A+ +QIQA+ A++ ++Q++A+
Sbjct: 179 CASRRSLRDDPKFDALIAALFTNIDSYEEEELAFHEDEMARNKQIQASIAQISQRQSEAL 238

Query: 408 PNR 416
             R
Sbjct: 239 VKR 241


>ref|XP_003539538.1| PREDICTED: putative E3 ubiquitin-protein ligase RING1a-like
           [Glycine max]
          Length = 500

 Score =  123 bits (309), Expect = 1e-26
 Identities = 55/122 (45%), Positives = 87/122 (71%)
 Frame = +3

Query: 57  YMDIDLATIKPHLTCPICLGIFQQAQVVTLCFHRFCKECINKSMRVGNRQCPTCRKVLPS 236
           ++ ++L  I+  + CPICLGI ++ + V  C HRFC+ECI+KSMR+GN +CP CR    S
Sbjct: 108 FVYVELLEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCAS 167

Query: 237 RRFLREDHLCNRLVAALYPNMNSSWQEDVELTDEEKAQTEQIQAAFAEMIRKQAKAIPNR 416
           RR LR+D   + L+AALYP++    QE++E  +EEK + +QIQA+ A+++++Q++A+  R
Sbjct: 168 RRSLRDDPNYDALIAALYPDIEKYEQEELEFREEEKNRNKQIQASIAKVVQRQSEALVKR 227

Query: 417 VK 422
            K
Sbjct: 228 RK 229