BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00028264
         (329 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002451896.1| hypothetical protein SORBIDRAFT_04g009491 [S...    70   4e-12
emb|CAN71467.1| hypothetical protein VITISV_038988 [Vitis vinifera]    70   2e-10
ref|XP_003588268.1| NADH-ubiquinone oxidoreductase chain [Medica...    52   1e-07

>ref|XP_002451896.1| hypothetical protein SORBIDRAFT_04g009491 [Sorghum bicolor]
           gi|241931727|gb|EES04872.1| hypothetical protein
           SORBIDRAFT_04g009491 [Sorghum bicolor]
          Length = 289

 Score = 69.7 bits (169), Expect(2) = 4e-12
 Identities = 28/30 (93%), Positives = 29/30 (96%)
 Frame = +3

Query: 150 YACIFRLDSRIFCFSGGGEQCCLRCGRCPP 239
           YAC+FRLDSRIFCFSGGGEQC LRCGRCPP
Sbjct: 239 YACLFRLDSRIFCFSGGGEQCSLRCGRCPP 268



 Score = 26.2 bits (56), Expect(2) = 4e-12
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = +2

Query: 122 RRPLSLDHYLCMY 160
           R PLSLDHY C++
Sbjct: 231 RGPLSLDHYACLF 243


>emb|CAN71467.1| hypothetical protein VITISV_038988 [Vitis vinifera]
          Length = 280

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 44/104 (42%), Positives = 44/104 (42%), Gaps = 7/104 (6%)
 Frame = +3

Query: 3   GPKAELTGGGWSKLQ*VATPFSENRT*DWSIIRLRPELPSVGPCH*TTIYACIFRLDSRI 182
           GPKAELTGGGWSKL                                         LDSRI
Sbjct: 37  GPKAELTGGGWSKLH----------------------------------------LDSRI 56

Query: 183 FCFSGGGEQCCLRCGRCP-------PERTAH*LGGLVGGGPNRR 293
           FCFSGGGEQC LRCGRCP       P R    L     GGP RR
Sbjct: 57  FCFSGGGEQCSLRCGRCPPVGPGLLPARKNRSLASRTSGGPIRR 100


>ref|XP_003588268.1| NADH-ubiquinone oxidoreductase chain [Medicago truncatula]
           gi|355477316|gb|AES58519.1| NADH-ubiquinone
           oxidoreductase chain [Medicago truncatula]
          Length = 556

 Score = 51.6 bits (122), Expect(2) = 1e-07
 Identities = 21/24 (87%), Positives = 23/24 (95%)
 Frame = -2

Query: 241 SGGHLPQRKQHCSPPPEKQKIRES 170
           +GGHLPQRK HCSPPP+KQKIRES
Sbjct: 294 TGGHLPQRKLHCSPPPDKQKIRES 317



 Score = 29.3 bits (64), Expect(2) = 1e-07
 Identities = 19/33 (57%), Positives = 21/33 (63%), Gaps = 7/33 (21%)
 Frame = -3

Query: 312 GSKGMVFYGWAPL-------PLVRLASERFFRA 235
           GS+   F+G  PL       PLVRLASERFFRA
Sbjct: 257 GSRWRHFFG--PLKKKGNGPPLVRLASERFFRA 287