BLASTX nr result

ID: Coptis21_contig00028254 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00028254
         (326 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002262859.2| PREDICTED: uncharacterized protein LOC100244...   186   1e-45
emb|CBI14870.3| unnamed protein product [Vitis vinifera]              186   1e-45
ref|XP_002321672.1| predicted protein [Populus trichocarpa] gi|2...   186   2e-45
ref|XP_002511255.1| nucleic acid binding protein, putative [Rici...   185   3e-45
ref|XP_002271064.2| PREDICTED: uncharacterized protein LOC100257...   185   4e-45

>ref|XP_002262859.2| PREDICTED: uncharacterized protein LOC100244377 [Vitis vinifera]
          Length = 254

 Score =  186 bits (473), Expect = 1e-45
 Identities = 78/108 (72%), Positives = 94/108 (87%)
 Frame = -1

Query: 326 RTLKQEQERVHEVHCSRERSRAAWKAVDEYLMPFVEQDKYQFPINCRLHADNDMFRDQEQ 147
           R LKQ+++  HEVHCSRERSRAAWK ++EY+MPFVE+++YQ   +C+LH DN +F DQEQ
Sbjct: 19  RNLKQQKDHAHEVHCSRERSRAAWKIIEEYMMPFVEREQYQISSSCKLHPDNHLFSDQEQ 78

Query: 146 HKVHMDVNEWQCGYCKKSFRAEKFLDQHFDNRHYNLLNASQSNCLADL 3
           HK+H+D+NEW+CGYCKKSFRAEKFLDQHFDNRHY LLN S S CLADL
Sbjct: 79  HKIHVDINEWRCGYCKKSFRAEKFLDQHFDNRHYGLLNVSHSKCLADL 126


>emb|CBI14870.3| unnamed protein product [Vitis vinifera]
          Length = 276

 Score =  186 bits (473), Expect = 1e-45
 Identities = 78/108 (72%), Positives = 94/108 (87%)
 Frame = -1

Query: 326 RTLKQEQERVHEVHCSRERSRAAWKAVDEYLMPFVEQDKYQFPINCRLHADNDMFRDQEQ 147
           R LKQ+++  HEVHCSRERSRAAWK ++EY+MPFVE+++YQ   +C+LH DN +F DQEQ
Sbjct: 41  RNLKQQKDHAHEVHCSRERSRAAWKIIEEYMMPFVEREQYQISSSCKLHPDNHLFSDQEQ 100

Query: 146 HKVHMDVNEWQCGYCKKSFRAEKFLDQHFDNRHYNLLNASQSNCLADL 3
           HK+H+D+NEW+CGYCKKSFRAEKFLDQHFDNRHY LLN S S CLADL
Sbjct: 101 HKIHVDINEWRCGYCKKSFRAEKFLDQHFDNRHYGLLNVSHSKCLADL 148


>ref|XP_002321672.1| predicted protein [Populus trichocarpa] gi|222868668|gb|EEF05799.1|
           predicted protein [Populus trichocarpa]
          Length = 266

 Score =  186 bits (471), Expect = 2e-45
 Identities = 77/108 (71%), Positives = 94/108 (87%)
 Frame = -1

Query: 326 RTLKQEQERVHEVHCSRERSRAAWKAVDEYLMPFVEQDKYQFPINCRLHADNDMFRDQEQ 147
           RT+KQE+   H+VHCSRERSRAAW+A++EYLMPFVE+++YQ    CRLH  ND+FRDQE+
Sbjct: 33  RTVKQEEGHAHKVHCSRERSRAAWQAIEEYLMPFVEREQYQISSKCRLHPSNDLFRDQEE 92

Query: 146 HKVHMDVNEWQCGYCKKSFRAEKFLDQHFDNRHYNLLNASQSNCLADL 3
           HK+H+D+NEW+CGYCKK FRAEK+LDQHFDNRHYNLLN S   C+ADL
Sbjct: 93  HKIHVDINEWKCGYCKKHFRAEKYLDQHFDNRHYNLLNISDGKCMADL 140


>ref|XP_002511255.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223550370|gb|EEF51857.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 217

 Score =  185 bits (470), Expect = 3e-45
 Identities = 77/108 (71%), Positives = 95/108 (87%)
 Frame = -1

Query: 326 RTLKQEQERVHEVHCSRERSRAAWKAVDEYLMPFVEQDKYQFPINCRLHADNDMFRDQEQ 147
           RT K+++E  HEVHCSRERSRAAW+ ++EYLMPFVE+++YQ    CRLH +ND+FRDQE+
Sbjct: 9   RTGKKDKEHAHEVHCSRERSRAAWQIIEEYLMPFVERERYQISSKCRLHPENDLFRDQEE 68

Query: 146 HKVHMDVNEWQCGYCKKSFRAEKFLDQHFDNRHYNLLNASQSNCLADL 3
           HK+H+D+NEW+CGYCKKSFRAE+FLDQHF+NRHYNLLN S   CLADL
Sbjct: 69  HKIHVDINEWKCGYCKKSFRAERFLDQHFENRHYNLLNISDGKCLADL 116


>ref|XP_002271064.2| PREDICTED: uncharacterized protein LOC100257742 [Vitis vinifera]
          Length = 279

 Score =  185 bits (469), Expect = 4e-45
 Identities = 77/108 (71%), Positives = 96/108 (88%)
 Frame = -1

Query: 326 RTLKQEQERVHEVHCSRERSRAAWKAVDEYLMPFVEQDKYQFPINCRLHADNDMFRDQEQ 147
           R +KQ+Q+ VHEVHCSRERSRAAWK ++EYLMPFVE++ YQ   +CRLH +ND++RDQEQ
Sbjct: 44  RNVKQDQDGVHEVHCSRERSRAAWKIIEEYLMPFVEKEGYQISSSCRLHHENDLYRDQEQ 103

Query: 146 HKVHMDVNEWQCGYCKKSFRAEKFLDQHFDNRHYNLLNASQSNCLADL 3
           HK+H+D+NEW+CGYCKKSF AE +LD+HFDNRHYNLLN SQ+ CLAD+
Sbjct: 104 HKIHVDINEWRCGYCKKSFYAENYLDKHFDNRHYNLLNVSQNKCLADV 151


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