BLASTX nr result

ID: Coptis21_contig00028220 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00028220
         (544 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320951.1| predicted protein [Populus trichocarpa] gi|2...   153   1e-35
ref|XP_002301538.1| predicted protein [Populus trichocarpa] gi|2...   152   2e-35
gb|ABK92443.1| unknown [Populus trichocarpa]                          150   2e-34
ref|XP_002515214.1| conserved hypothetical protein [Ricinus comm...   148   6e-34
ref|XP_003591333.1| hypothetical protein MTR_1g086330 [Medicago ...   145   3e-33

>ref|XP_002320951.1| predicted protein [Populus trichocarpa] gi|222861724|gb|EEE99266.1|
           predicted protein [Populus trichocarpa]
          Length = 247

 Score =  153 bits (387), Expect = 1e-35
 Identities = 57/85 (67%), Positives = 73/85 (85%)
 Frame = +3

Query: 39  PFPWFRMAYFVFWSCTYILFQWILHASGVSWWPYAFLELSTPWAPMWYFAIALIHLPCFG 218
           PFPWFR+AYFV WSC Y++FQWI+HA G SWWPY FLEL TPW+P+WYF +AL+H+PC+G
Sbjct: 163 PFPWFRIAYFVLWSCLYVIFQWIIHACGFSWWPYPFLELDTPWSPLWYFLVALMHIPCYG 222

Query: 219 FYVLVVKVKNSIFSRVFPRAYLRSY 293
            Y L+ K KN+IF R+FPRA++RS+
Sbjct: 223 IYALIFKAKNAIFPRLFPRAFVRSF 247


>ref|XP_002301538.1| predicted protein [Populus trichocarpa] gi|222843264|gb|EEE80811.1|
           predicted protein [Populus trichocarpa]
          Length = 320

 Score =  152 bits (385), Expect = 2e-35
 Identities = 57/84 (67%), Positives = 74/84 (88%)
 Frame = +3

Query: 39  PFPWFRMAYFVFWSCTYILFQWILHASGVSWWPYAFLELSTPWAPMWYFAIALIHLPCFG 218
           PFPWFR+AYFV WSC Y++FQW++HA G +WWPY FLEL+TPWAP+WYFA+A+IH+PC+G
Sbjct: 236 PFPWFRLAYFVQWSCLYVIFQWVIHACGFTWWPYPFLELNTPWAPLWYFAMAVIHIPCYG 295

Query: 219 FYVLVVKVKNSIFSRVFPRAYLRS 290
            Y L+ K KN+IF R+FPRA++RS
Sbjct: 296 IYALIFKAKNTIFPRLFPRAFVRS 319


>gb|ABK92443.1| unknown [Populus trichocarpa]
          Length = 320

 Score =  150 bits (378), Expect = 2e-34
 Identities = 56/84 (66%), Positives = 73/84 (86%)
 Frame = +3

Query: 39  PFPWFRMAYFVFWSCTYILFQWILHASGVSWWPYAFLELSTPWAPMWYFAIALIHLPCFG 218
           PFPWFR+AYFV WSC Y++FQW++HA G +WWPY FL L+TPWAP+WYFA+A+IH+PC+G
Sbjct: 236 PFPWFRLAYFVQWSCLYVIFQWVIHACGFTWWPYPFLGLNTPWAPLWYFAMAVIHIPCYG 295

Query: 219 FYVLVVKVKNSIFSRVFPRAYLRS 290
            Y L+ K KN+IF R+FPRA++RS
Sbjct: 296 IYALIFKAKNTIFPRLFPRAFVRS 319


>ref|XP_002515214.1| conserved hypothetical protein [Ricinus communis]
           gi|223545694|gb|EEF47198.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 338

 Score =  148 bits (373), Expect = 6e-34
 Identities = 55/85 (64%), Positives = 71/85 (83%)
 Frame = +3

Query: 39  PFPWFRMAYFVFWSCTYILFQWILHASGVSWWPYAFLELSTPWAPMWYFAIALIHLPCFG 218
           PFPWFR+AYFV WSC Y++FQW++HA G +WWPY FL+L  PWAP+WYF +AL+H+PC+G
Sbjct: 254 PFPWFRLAYFVQWSCLYVVFQWVIHACGFTWWPYPFLDLDIPWAPIWYFVLALVHIPCYG 313

Query: 219 FYVLVVKVKNSIFSRVFPRAYLRSY 293
            Y L+VK KNSIF + FP A++RSY
Sbjct: 314 IYSLIVKAKNSIFPKWFPHAFVRSY 338


>ref|XP_003591333.1| hypothetical protein MTR_1g086330 [Medicago truncatula]
           gi|355480381|gb|AES61584.1| hypothetical protein
           MTR_1g086330 [Medicago truncatula]
          Length = 335

 Score =  145 bits (367), Expect = 3e-33
 Identities = 54/85 (63%), Positives = 71/85 (83%)
 Frame = +3

Query: 39  PFPWFRMAYFVFWSCTYILFQWILHASGVSWWPYAFLELSTPWAPMWYFAIALIHLPCFG 218
           PFPWFR+AYFV WSC+Y++FQW++HA G +WWPY FLEL+ PWAP+WY  +AL+H+PC+G
Sbjct: 251 PFPWFRIAYFVLWSCSYVIFQWVIHACGSTWWPYPFLELNIPWAPLWYICMALVHIPCYG 310

Query: 219 FYVLVVKVKNSIFSRVFPRAYLRSY 293
            Y L+VK K +I  R FPRA++RSY
Sbjct: 311 IYSLIVKTKINILHRFFPRAFVRSY 335


Top