BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00028181
         (486 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518458.1| hepatocellular carcinoma-associated antigen,...   151   5e-35
ref|XP_002310740.1| predicted protein [Populus trichocarpa] gi|2...   148   4e-34
ref|XP_002272817.1| PREDICTED: U3 small nucleolar RNA-associated...   148   5e-34
ref|XP_003529637.1| PREDICTED: U3 small nucleolar RNA-associated...   147   1e-33
ref|XP_003549767.1| PREDICTED: U3 small nucleolar RNA-associated...   146   1e-33

>ref|XP_002518458.1| hepatocellular carcinoma-associated antigen, putative [Ricinus
           communis] gi|223542303|gb|EEF43845.1| hepatocellular
           carcinoma-associated antigen, putative [Ricinus
           communis]
          Length = 652

 Score =  151 bits (382), Expect = 5e-35
 Identities = 76/128 (59%), Positives = 94/128 (73%)
 Frame = +2

Query: 101 MADIVQYRLEQMVDELDDLEKKGIFTRLEINEIVKKRRNFEYKLKRPSPLKQDFLSFIEY 280
           MAD VQYRLE+MVDELDDLE++G FT  EI EIVK+RR FEY+LKRPSPLKQD+L++IEY
Sbjct: 1   MADTVQYRLERMVDELDDLERRGFFTHQEIAEIVKQRRKFEYRLKRPSPLKQDYLAYIEY 60

Query: 281 EKQXXXXXXXXXXXXXXXXEEKGMGNKKIKRSVSDTSCVVRILRVFRLVTMRFKGDVGLW 460
           E Q                +EK  GNKK+K SVSD + V RI+ ++RL   R+KGD+ LW
Sbjct: 61  ETQLDTLRRLRKKSVARDLKEK--GNKKMKMSVSDFAGVSRIVDIYRLAVTRYKGDIDLW 118

Query: 461 YQYLEFCR 484
           ++YLEFCR
Sbjct: 119 FRYLEFCR 126


>ref|XP_002310740.1| predicted protein [Populus trichocarpa] gi|222853643|gb|EEE91190.1|
           predicted protein [Populus trichocarpa]
          Length = 643

 Score =  148 bits (374), Expect = 4e-34
 Identities = 73/129 (56%), Positives = 96/129 (74%), Gaps = 1/129 (0%)
 Frame = +2

Query: 101 MADIVQYRLEQMVDELDDLEKKGIFTRLEINEIVKKRRNFEYKLKRPSPLKQDFLSFIEY 280
           MAD VQY+LE+MVDELDDLE+KGIFTR EI EIVK+RR FEY+LKRPSPLKQDFL++I+Y
Sbjct: 1   MADTVQYKLERMVDELDDLERKGIFTRQEIAEIVKQRRKFEYRLKRPSPLKQDFLAYIDY 60

Query: 281 EKQXXXXXXXXXXXXXXXXEEKG-MGNKKIKRSVSDTSCVVRILRVFRLVTMRFKGDVGL 457
           E Q                E++G    ++ K+SVSD + + RI+ ++R+  MRFKGD+ L
Sbjct: 61  ETQLDSLRRLRKKSVARELEKQGDKRRRRNKKSVSDFAGISRIVEIYRIAVMRFKGDLEL 120

Query: 458 WYQYLEFCR 484
           W++YLEFC+
Sbjct: 121 WFRYLEFCK 129


>ref|XP_002272817.1| PREDICTED: U3 small nucleolar RNA-associated protein 6 homolog
           [Vitis vinifera] gi|302144122|emb|CBI23227.3| unnamed
           protein product [Vitis vinifera]
          Length = 652

 Score =  148 bits (373), Expect = 5e-34
 Identities = 73/128 (57%), Positives = 94/128 (73%)
 Frame = +2

Query: 101 MADIVQYRLEQMVDELDDLEKKGIFTRLEINEIVKKRRNFEYKLKRPSPLKQDFLSFIEY 280
           MAD+VQYRLE+MV+ELDDLE++G+F+R EI EIVK+RR FEY+LKRPSPLKQD+L++IEY
Sbjct: 1   MADVVQYRLERMVNELDDLERRGVFSRREIAEIVKQRRKFEYRLKRPSPLKQDYLAYIEY 60

Query: 281 EKQXXXXXXXXXXXXXXXXEEKGMGNKKIKRSVSDTSCVVRILRVFRLVTMRFKGDVGLW 460
           EKQ                       KK K+SVSD + V RIL +++L  MR+KGD+ LW
Sbjct: 61  EKQLDSLRRLRKKSVARE------AKKKTKKSVSDFAGVSRILEIYQLAVMRYKGDIDLW 114

Query: 461 YQYLEFCR 484
           ++YLEFCR
Sbjct: 115 FRYLEFCR 122


>ref|XP_003529637.1| PREDICTED: U3 small nucleolar RNA-associated protein 6 homolog
           [Glycine max]
          Length = 655

 Score =  147 bits (370), Expect = 1e-33
 Identities = 71/128 (55%), Positives = 95/128 (74%)
 Frame = +2

Query: 101 MADIVQYRLEQMVDELDDLEKKGIFTRLEINEIVKKRRNFEYKLKRPSPLKQDFLSFIEY 280
           MAD+VQYRLE+MVDELDDLE++G+F+R EI EIVK+RR FEY+LKRPSPLK+DFL+++EY
Sbjct: 1   MADVVQYRLERMVDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPSPLKEDFLAYVEY 60

Query: 281 EKQXXXXXXXXXXXXXXXXEEKGMGNKKIKRSVSDTSCVVRILRVFRLVTMRFKGDVGLW 460
           E Q                E    GNKK+K+S SD + ++RI+ ++ L   R+KGD+ LW
Sbjct: 61  ETQ--LDALRRLRKKSVARELMKQGNKKLKKSKSDFAGLLRIMDIYELALKRYKGDIDLW 118

Query: 461 YQYLEFCR 484
           ++YLEFCR
Sbjct: 119 FRYLEFCR 126


>ref|XP_003549767.1| PREDICTED: U3 small nucleolar RNA-associated protein 6 homolog
           [Glycine max]
          Length = 649

 Score =  146 bits (369), Expect = 1e-33
 Identities = 72/128 (56%), Positives = 94/128 (73%)
 Frame = +2

Query: 101 MADIVQYRLEQMVDELDDLEKKGIFTRLEINEIVKKRRNFEYKLKRPSPLKQDFLSFIEY 280
           MAD+VQYRLE+MVDELDDLE++G+F+R EI EIVK+RR FEY+LKRPSPLKQDFL+++EY
Sbjct: 1   MADVVQYRLERMVDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPSPLKQDFLAYVEY 60

Query: 281 EKQXXXXXXXXXXXXXXXXEEKGMGNKKIKRSVSDTSCVVRILRVFRLVTMRFKGDVGLW 460
           E Q                E    GNKK+K+S SD + ++RI+ ++ L   R+KGD+ LW
Sbjct: 61  ETQ--LDALRRLRKKSVARELMKQGNKKLKKSKSDFAGLLRIMDIYELALKRYKGDIDLW 118

Query: 461 YQYLEFCR 484
           + YLEFCR
Sbjct: 119 FCYLEFCR 126