BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00028163
         (296 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACZ98537.1| PPR motif protein [Malus x domestica]                   74   1e-11
ref|XP_003528273.1| PREDICTED: pentatricopeptide repeat-containi...    71   8e-11
emb|CBI28135.3| unnamed protein product [Vitis vinifera]               69   5e-10
ref|XP_002281645.1| PREDICTED: pentatricopeptide repeat-containi...    69   5e-10
gb|AEB39781.1| pentatricopeptide repeat protein 79 [Funaria hygr...    67   1e-09

>gb|ACZ98537.1| PPR motif protein [Malus x domestica]
          Length = 751

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 37/55 (67%), Positives = 44/55 (80%)
 Frame = +2

Query: 2   VQKLRDVMKEKGLRKTPGSSEIQVGTELHVFVADDRSHPQTSVIYETLALLQREI 166
           V+K+R +MKE+GLRK PG S IQVG EL+VFVA D+SHP+T  IY TLALL  EI
Sbjct: 694 VKKVRQLMKERGLRKIPGCSWIQVGEELNVFVAGDKSHPETEEIYTTLALLLMEI 748


>ref|XP_003528273.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
           chloroplastic-like [Glycine max]
          Length = 805

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 36/55 (65%), Positives = 41/55 (74%)
 Frame = +2

Query: 2   VQKLRDVMKEKGLRKTPGSSEIQVGTELHVFVADDRSHPQTSVIYETLALLQREI 166
           V  LR +MKEKGLRK PG S I+VG ELHVF+A DRSHP+T  IY TL LL  E+
Sbjct: 750 VSNLRGLMKEKGLRKIPGCSWIEVGQELHVFIASDRSHPKTEEIYVTLDLLGFEM 804


>emb|CBI28135.3| unnamed protein product [Vitis vinifera]
          Length = 1974

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 34/66 (51%), Positives = 45/66 (68%)
 Frame = +2

Query: 2    VQKLRDVMKEKGLRKTPGSSEIQVGTELHVFVADDRSHPQTSVIYETLALLQREIRSLNY 181
            V  +RD+MK +GLRK PG S IQ G +L+VFVA D SHP+T  IY  LA+L  E+R + Y
Sbjct: 1872 VSNMRDLMKVRGLRKNPGCSWIQTGGKLNVFVAGDGSHPKTEEIYAMLAMLLSEMRFMGY 1931

Query: 182  FHMLNN 199
              + +N
Sbjct: 1932 VPIASN 1937


>ref|XP_002281645.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
           chloroplastic-like [Vitis vinifera]
          Length = 858

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 34/66 (51%), Positives = 45/66 (68%)
 Frame = +2

Query: 2   VQKLRDVMKEKGLRKTPGSSEIQVGTELHVFVADDRSHPQTSVIYETLALLQREIRSLNY 181
           V  +RD+MK +GLRK PG S IQ G +L+VFVA D SHP+T  IY  LA+L  E+R + Y
Sbjct: 777 VSNMRDLMKVRGLRKNPGCSWIQTGGKLNVFVAGDGSHPKTEEIYAMLAMLLSEMRFMGY 836

Query: 182 FHMLNN 199
             + +N
Sbjct: 837 VPIASN 842


>gb|AEB39781.1| pentatricopeptide repeat protein 79 [Funaria hygrometrica]
          Length = 820

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 32/60 (53%), Positives = 43/60 (71%)
 Frame = +2

Query: 2   VQKLRDVMKEKGLRKTPGSSEIQVGTELHVFVADDRSHPQTSVIYETLALLQREIRSLNY 181
           V KLR +MKE+G++K PG S I+V  E+H FVA D+SHP+T  IY  L  L ++I+SL Y
Sbjct: 670 VAKLRKLMKERGVKKEPGRSWIEVAGEVHSFVAGDQSHPRTEEIYSELEALTKQIKSLGY 729