BLASTX nr result
ID: Coptis21_contig00028132
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00028132
(1764 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002513472.1| sorting and assembly machinery (sam50) prote... 907 0.0
ref|XP_002285507.2| PREDICTED: outer envelope protein of 80 kDa,... 892 0.0
ref|XP_002871896.1| hypothetical protein ARALYDRAFT_909999 [Arab... 889 0.0
ref|XP_002304768.1| predicted protein [Populus trichocarpa] gi|2... 884 0.0
ref|NP_568378.1| outer envelope protein [Arabidopsis thaliana] g... 880 0.0
>ref|XP_002513472.1| sorting and assembly machinery (sam50) protein, putative [Ricinus
communis] gi|223547380|gb|EEF48875.1| sorting and
assembly machinery (sam50) protein, putative [Ricinus
communis]
Length = 700
Score = 907 bits (2344), Expect = 0.0
Identities = 445/558 (79%), Positives = 489/558 (87%)
Frame = -1
Query: 1764 EELERKDLEVEASMALKACRPNSALTVREVQEDVHRIMARGYFCSCMPVAVDTRDGIRLV 1585
EELERKDLE EA ALKACR NSALTVREVQEDVHRI+ GYFCSC PVAVDTRDGIRLV
Sbjct: 143 EELERKDLEAEAVAALKACRANSALTVREVQEDVHRIIDSGYFCSCTPVAVDTRDGIRLV 202
Query: 1584 FQVEPNQDFQGLVCEGANVLPSKFLEDAFRDGYGKIVNIRRLNEVVHSIDGWYRERGLFG 1405
FQVEPNQ+F GLVCEGA+VLP+KFL+DAFR+GYGK+VNIR L++V+ SI+GWY ERGLFG
Sbjct: 203 FQVEPNQEFHGLVCEGASVLPTKFLQDAFREGYGKVVNIRHLDDVITSINGWYMERGLFG 262
Query: 1404 LVSDLEILSGGIIRLQVSEAEVNNITIRFLDKRTGEPTTGKTKPETILRQLTTKKGQVYS 1225
LVS +EILSGGI+RLQV+EAEVNNI+IRFLD++TGEPT GKTKPETILRQLTTKKGQVYS
Sbjct: 263 LVSGVEILSGGILRLQVAEAEVNNISIRFLDRKTGEPTKGKTKPETILRQLTTKKGQVYS 322
Query: 1224 LLQGKRDVETVLTMGIMEDVSIIPQPAGDTGKVDLIMNVVERVXXXXXXXXXXXXXXXXX 1045
+LQGKRDV+TVLTMGIMEDVSIIPQPAGDTGKVDL+MNVVER
Sbjct: 323 MLQGKRDVDTVLTMGIMEDVSIIPQPAGDTGKVDLVMNVVERPSGGFSAGGGISSGITSG 382
Query: 1044 XXXGLVGSFAYSHRNVFGRNQKLNVSWERGQIDSIFRINYTDPWIEGDDKRTSRSIMVQN 865
GL+GSF YSHRNVFGRNQKLN+S ERGQIDSIFRINYTDPWI+GDDKRTSR+IMVQN
Sbjct: 383 PLSGLIGSFTYSHRNVFGRNQKLNISLERGQIDSIFRINYTDPWIQGDDKRTSRTIMVQN 442
Query: 864 SRTPGTLVHGNQPDSSNVTIGRITAGIEFSRPIRPKWSGTAGIIYQRAGARDERGNPLRK 685
SRTPG LVH QP +S++TIGR+TAG+EFSRP+RPKWSGTAG+I+Q AGA DE+GNP+ K
Sbjct: 443 SRTPGNLVHSYQPGNSSLTIGRVTAGVEFSRPLRPKWSGTAGLIFQHAGAHDEKGNPIIK 502
Query: 684 DYYSSPLTASGNTHDDMLLAKLESVYTDSGDHGSSMLVFNMEQGLPVMAEWLSFNRVNAR 505
D+YSSPLTASG THD+MLLAK ESVYT SGDHGSSM V N+EQGLP+ EWL FNRVNAR
Sbjct: 503 DHYSSPLTASGKTHDNMLLAKFESVYTGSGDHGSSMFVLNVEQGLPLWPEWLFFNRVNAR 562
Query: 504 ARKGVELGPARFLLSLSGGHVVGSFSPHEAFAIGGTNSVRGYEEGAXXXXXXXXXXXXXX 325
ARKGVE+GPA FLLSLSGGHVVG+FSPHEAFAIGGTNSVRGYEEGA
Sbjct: 563 ARKGVEIGPALFLLSLSGGHVVGNFSPHEAFAIGGTNSVRGYEEGAVGSARSYAVGSGEI 622
Query: 324 SFPMFGPVEGALFADYGSDLGSGPMVPGDPAGARLKPGSGYGYGFGIRVDSPLGPLRLEY 145
SFP+ GPVEG LFADYG+DLGSGP VPGDPAGARLKPGSGYGYGFG+RVDSPLGPLRLEY
Sbjct: 623 SFPLMGPVEGVLFADYGTDLGSGPTVPGDPAGARLKPGSGYGYGFGMRVDSPLGPLRLEY 682
Query: 144 AFNDKHARRFHFGVGHRN 91
AFNDKHA+RFHFGVGHRN
Sbjct: 683 AFNDKHAKRFHFGVGHRN 700
>ref|XP_002285507.2| PREDICTED: outer envelope protein of 80 kDa, chloroplastic [Vitis
vinifera]
Length = 673
Score = 892 bits (2305), Expect = 0.0
Identities = 443/559 (79%), Positives = 482/559 (86%), Gaps = 1/559 (0%)
Frame = -1
Query: 1764 EELERKDLEVEASMALKACRPNSALTVREVQEDVHRIMARGYFCSCMPVAVDTRDGIRLV 1585
EELERKDLE EA ALKACRPNSALTVREVQEDVHRI+ G F SCMPVAVDTRDGIRLV
Sbjct: 115 EELERKDLEAEAVAALKACRPNSALTVREVQEDVHRIIDSGLFWSCMPVAVDTRDGIRLV 174
Query: 1584 FQVEPNQDFQGLVCEGANVLPSKFLEDAFRDGYGKIVNIRRLNEVVHSIDGWYRERGLFG 1405
FQVEPNQ+FQGLVCEGANVLPSKFLEDAFRDGYGK+VNIRRL++V+ SI+ WY ERGLFG
Sbjct: 175 FQVEPNQEFQGLVCEGANVLPSKFLEDAFRDGYGKVVNIRRLDDVITSINDWYNERGLFG 234
Query: 1404 LVSDLEILSGGIIRLQVSEAEVNNITIRFLDKRTGEPTTGKTKPETILRQLTTKKGQVYS 1225
+VS +EILSGGIIRL+VSEAEVN+I++RFLD++TGEPT GKTKPETILRQLTTKKGQVYS
Sbjct: 235 MVSGVEILSGGIIRLKVSEAEVNDISVRFLDRKTGEPTIGKTKPETILRQLTTKKGQVYS 294
Query: 1224 LLQGKRDVETVLTMGIMEDVSIIPQPAGDTGKVDLIMNVVERVXXXXXXXXXXXXXXXXX 1045
L+QGKRD ETVLTMGIMEDVSII Q GD K+DL+MNVVERV
Sbjct: 295 LIQGKRDAETVLTMGIMEDVSIIHQSVGDRDKIDLVMNVVERVSGGFSAGGGISRGITTS 354
Query: 1044 XXXG-LVGSFAYSHRNVFGRNQKLNVSWERGQIDSIFRINYTDPWIEGDDKRTSRSIMVQ 868
L+GSFAYSHRNVFGRNQKLNVS ERGQ+DSIFRINYTDPWIEGDDKRTSRSIM+Q
Sbjct: 355 RPLSGLIGSFAYSHRNVFGRNQKLNVSLERGQVDSIFRINYTDPWIEGDDKRTSRSIMIQ 414
Query: 867 NSRTPGTLVHGNQPDSSNVTIGRITAGIEFSRPIRPKWSGTAGIIYQRAGARDERGNPLR 688
NSRTPG LVHG QP +S++TIGR+TAGIEFSRP RP WSGT G+I+Q AGA DE G P+
Sbjct: 415 NSRTPGILVHGGQPANSSLTIGRVTAGIEFSRPFRPNWSGTVGLIFQHAGAHDEHGKPII 474
Query: 687 KDYYSSPLTASGNTHDDMLLAKLESVYTDSGDHGSSMLVFNMEQGLPVMAEWLSFNRVNA 508
KD+YSSPLTASGNTHDD LLAK ESVYT SGDHGSSM VFNMEQGLPV+ EWL FNRVNA
Sbjct: 475 KDFYSSPLTASGNTHDDALLAKFESVYTGSGDHGSSMFVFNMEQGLPVLPEWLFFNRVNA 534
Query: 507 RARKGVELGPARFLLSLSGGHVVGSFSPHEAFAIGGTNSVRGYEEGAXXXXXXXXXXXXX 328
RARKGVE+GPA LLSLSGGHVVG+FSPHEAFAIGGTNSVRGYEEGA
Sbjct: 535 RARKGVEIGPACLLLSLSGGHVVGNFSPHEAFAIGGTNSVRGYEEGAVGSGRSHVVGSGE 594
Query: 327 XSFPMFGPVEGALFADYGSDLGSGPMVPGDPAGARLKPGSGYGYGFGIRVDSPLGPLRLE 148
SFP++GP+ GALFADYG+DLGSGP VPGDPAGARLKPGSGYGYGFGIR+DSPLGPLRLE
Sbjct: 595 ISFPLYGPLGGALFADYGTDLGSGPTVPGDPAGARLKPGSGYGYGFGIRLDSPLGPLRLE 654
Query: 147 YAFNDKHARRFHFGVGHRN 91
YAFND+ A+RFHFGVGHRN
Sbjct: 655 YAFNDQQAQRFHFGVGHRN 673
>ref|XP_002871896.1| hypothetical protein ARALYDRAFT_909999 [Arabidopsis lyrata subsp.
lyrata] gi|297317733|gb|EFH48155.1| hypothetical protein
ARALYDRAFT_909999 [Arabidopsis lyrata subsp. lyrata]
Length = 732
Score = 889 bits (2298), Expect = 0.0
Identities = 432/558 (77%), Positives = 481/558 (86%)
Frame = -1
Query: 1764 EELERKDLEVEASMALKACRPNSALTVREVQEDVHRIMARGYFCSCMPVAVDTRDGIRLV 1585
EELERKDLE+EA ALKACR NSALT+REVQEDVHRI+ GYFCSC PVAVDTRDGIRL+
Sbjct: 175 EELERKDLEMEALAALKACRANSALTIREVQEDVHRIIESGYFCSCTPVAVDTRDGIRLM 234
Query: 1584 FQVEPNQDFQGLVCEGANVLPSKFLEDAFRDGYGKIVNIRRLNEVVHSIDGWYRERGLFG 1405
FQVEPNQ+F+GLVCE ANVLPSKF+++AFRDG+GK++NI+RL E + SI+GWY ERGLFG
Sbjct: 235 FQVEPNQEFRGLVCENANVLPSKFIQEAFRDGFGKVINIKRLEEAITSINGWYMERGLFG 294
Query: 1404 LVSDLEILSGGIIRLQVSEAEVNNITIRFLDKRTGEPTTGKTKPETILRQLTTKKGQVYS 1225
+VSD++ LSGGI+RLQV+EAEVNNI+IRFLD++TGEPT GKT PETILRQLTTKKGQVYS
Sbjct: 295 IVSDIDTLSGGIVRLQVAEAEVNNISIRFLDRKTGEPTKGKTSPETILRQLTTKKGQVYS 354
Query: 1224 LLQGKRDVETVLTMGIMEDVSIIPQPAGDTGKVDLIMNVVERVXXXXXXXXXXXXXXXXX 1045
+LQGKRDV+TVL MGIMEDVSIIPQPAGDTGKVDLIMN VER
Sbjct: 355 MLQGKRDVDTVLAMGIMEDVSIIPQPAGDTGKVDLIMNCVERPSGGFSAGGGISSGITSG 414
Query: 1044 XXXGLVGSFAYSHRNVFGRNQKLNVSWERGQIDSIFRINYTDPWIEGDDKRTSRSIMVQN 865
GL+GSFAYSHRN+FGRNQKLNVS ERGQIDSIFRINYTDPWIEGDDKRTSRSIMVQN
Sbjct: 415 PLSGLIGSFAYSHRNLFGRNQKLNVSLERGQIDSIFRINYTDPWIEGDDKRTSRSIMVQN 474
Query: 864 SRTPGTLVHGNQPDSSNVTIGRITAGIEFSRPIRPKWSGTAGIIYQRAGARDERGNPLRK 685
SRTPG LVHGNQPD+S++TIGR+TAGIE+SRP RPKWSGTAG+I+Q AGARDE+GNP+ K
Sbjct: 475 SRTPGNLVHGNQPDNSSLTIGRVTAGIEYSRPFRPKWSGTAGLIFQHAGARDEQGNPIIK 534
Query: 684 DYYSSPLTASGNTHDDMLLAKLESVYTDSGDHGSSMLVFNMEQGLPVMAEWLSFNRVNAR 505
D+YSSPLTASG THDD LLAKLES+YT SGD GS+M FNMEQGLPV+ EWL FNRV R
Sbjct: 535 DFYSSPLTASGKTHDDTLLAKLESIYTGSGDRGSTMFAFNMEQGLPVLPEWLCFNRVTGR 594
Query: 504 ARKGVELGPARFLLSLSGGHVVGSFSPHEAFAIGGTNSVRGYEEGAXXXXXXXXXXXXXX 325
ARKG+ +GPARFL SLSGGHVVG+FSPHEAF IGGTNS+RGYEEGA
Sbjct: 595 ARKGIHIGPARFLFSLSGGHVVGNFSPHEAFVIGGTNSIRGYEEGAVGSGRSYVVGSGEM 654
Query: 324 SFPMFGPVEGALFADYGSDLGSGPMVPGDPAGARLKPGSGYGYGFGIRVDSPLGPLRLEY 145
SFP+ GPVEG +F DYG+DLGSG VPGDPAGARLKPGSGYGYG G+RVDSPLGPLRLEY
Sbjct: 655 SFPVRGPVEGVIFTDYGTDLGSGSTVPGDPAGARLKPGSGYGYGLGVRVDSPLGPLRLEY 714
Query: 144 AFNDKHARRFHFGVGHRN 91
AFND+HA RFHFGVG RN
Sbjct: 715 AFNDQHAGRFHFGVGLRN 732
>ref|XP_002304768.1| predicted protein [Populus trichocarpa] gi|222842200|gb|EEE79747.1|
predicted protein [Populus trichocarpa]
Length = 682
Score = 884 bits (2283), Expect = 0.0
Identities = 435/558 (77%), Positives = 482/558 (86%)
Frame = -1
Query: 1764 EELERKDLEVEASMALKACRPNSALTVREVQEDVHRIMARGYFCSCMPVAVDTRDGIRLV 1585
EELERKDLE EA ALKACR NSALTVREVQEDVHR+++ GYFCSCMPVAVDTRDGIRLV
Sbjct: 137 EELERKDLEAEALAALKACRANSALTVREVQEDVHRVISSGYFCSCMPVAVDTRDGIRLV 196
Query: 1584 FQVEPNQDFQGLVCEGANVLPSKFLEDAFRDGYGKIVNIRRLNEVVHSIDGWYRERGLFG 1405
FQVEPNQ+F GLVCEGA+VLP+KFL+DAFR GYGK+VNI++L+EV+ SI+ WY ERGLFG
Sbjct: 197 FQVEPNQEFHGLVCEGASVLPTKFLQDAFRGGYGKVVNIKQLDEVISSINSWYMERGLFG 256
Query: 1404 LVSDLEILSGGIIRLQVSEAEVNNITIRFLDKRTGEPTTGKTKPETILRQLTTKKGQVYS 1225
+VS+ EILSGGIIRLQ++EAEVN+I+IRFLD++TGEPT GKTKPETILRQLTTKKGQVYS
Sbjct: 257 MVSNAEILSGGIIRLQIAEAEVNDISIRFLDRKTGEPTKGKTKPETILRQLTTKKGQVYS 316
Query: 1224 LLQGKRDVETVLTMGIMEDVSIIPQPAGDTGKVDLIMNVVERVXXXXXXXXXXXXXXXXX 1045
+LQGKRDV+TVLTMGIMEDVS IPQPA DTGKVDLIMNVVER
Sbjct: 317 MLQGKRDVDTVLTMGIMEDVSFIPQPAEDTGKVDLIMNVVER------------PNGGFS 364
Query: 1044 XXXGLVGSFAYSHRNVFGRNQKLNVSWERGQIDSIFRINYTDPWIEGDDKRTSRSIMVQN 865
G+ FAYSHRNVFGRNQKLN+S ERGQIDSIFRINYTDPWIEGDDKRTSR+IMVQN
Sbjct: 365 AGGGISSGFAYSHRNVFGRNQKLNISLERGQIDSIFRINYTDPWIEGDDKRTSRTIMVQN 424
Query: 864 SRTPGTLVHGNQPDSSNVTIGRITAGIEFSRPIRPKWSGTAGIIYQRAGARDERGNPLRK 685
SRTPG LVHGNQP ++++TIGR+ AGIEFSRP+RPKWSGT G+I+Q AGAR+E+G+P K
Sbjct: 425 SRTPGNLVHGNQPVNNSLTIGRVAAGIEFSRPLRPKWSGTVGLIFQHAGARNEKGDPKIK 484
Query: 684 DYYSSPLTASGNTHDDMLLAKLESVYTDSGDHGSSMLVFNMEQGLPVMAEWLSFNRVNAR 505
D+Y+SPLTASG HDDMLLAK ESVYT SGDHGSSM VFNMEQGLP+ EWL FNRVN R
Sbjct: 485 DHYNSPLTASGKNHDDMLLAKFESVYTGSGDHGSSMFVFNMEQGLPLWPEWLFFNRVNTR 544
Query: 504 ARKGVELGPARFLLSLSGGHVVGSFSPHEAFAIGGTNSVRGYEEGAXXXXXXXXXXXXXX 325
ARKGVE+GPA LLSLSGGHV+G+FSPHEAFAIGGTNSVRGYEEGA
Sbjct: 545 ARKGVEIGPALCLLSLSGGHVMGNFSPHEAFAIGGTNSVRGYEEGAVGSGRSYAVGSGEI 604
Query: 324 SFPMFGPVEGALFADYGSDLGSGPMVPGDPAGARLKPGSGYGYGFGIRVDSPLGPLRLEY 145
SFP+ GPVEG FADYG+DLGSGP VPGDPAGARLKPGSGYGYGFGIRVDSPLGPLRLEY
Sbjct: 605 SFPVLGPVEGVFFADYGTDLGSGPSVPGDPAGARLKPGSGYGYGFGIRVDSPLGPLRLEY 664
Query: 144 AFNDKHARRFHFGVGHRN 91
AFND+H +RFHFGVGHRN
Sbjct: 665 AFNDRHTKRFHFGVGHRN 682
>ref|NP_568378.1| outer envelope protein [Arabidopsis thaliana]
gi|75168961|sp|Q9C5J8.1|OEP80_ARATH RecName: Full=Outer
envelope protein 80, chloroplastic; AltName:
Full=Chloroplastic outer envelope protein of 80 kDa;
Short=AtOEP80; AltName: Full=Protein TOC75-V;
Short=AtToc75-V gi|13430586|gb|AAK25915.1|AF360205_1
unknown protein [Arabidopsis thaliana]
gi|14532858|gb|AAK64111.1| unknown protein [Arabidopsis
thaliana] gi|332005348|gb|AED92731.1| outer envelope
protein [Arabidopsis thaliana]
Length = 732
Score = 880 bits (2274), Expect = 0.0
Identities = 426/558 (76%), Positives = 478/558 (85%)
Frame = -1
Query: 1764 EELERKDLEVEASMALKACRPNSALTVREVQEDVHRIMARGYFCSCMPVAVDTRDGIRLV 1585
EELERKDLE+EA ALKACR NSALT+REVQEDVHRI+ GYFCSC PVAVDTRDGIRL+
Sbjct: 175 EELERKDLEMEALAALKACRANSALTIREVQEDVHRIIESGYFCSCTPVAVDTRDGIRLM 234
Query: 1584 FQVEPNQDFQGLVCEGANVLPSKFLEDAFRDGYGKIVNIRRLNEVVHSIDGWYRERGLFG 1405
FQVEPNQ+F+GLVCE ANVLPSKF+ +AFRDG+GK++NI+RL E + SI+GWY ERGLFG
Sbjct: 235 FQVEPNQEFRGLVCENANVLPSKFIHEAFRDGFGKVINIKRLEEAITSINGWYMERGLFG 294
Query: 1404 LVSDLEILSGGIIRLQVSEAEVNNITIRFLDKRTGEPTTGKTKPETILRQLTTKKGQVYS 1225
+VSD++ LSGGI+RLQV+EAEVNNI+IRFLD++TGEPT GKT PETILRQLTTKKGQVYS
Sbjct: 295 IVSDIDTLSGGIVRLQVAEAEVNNISIRFLDRKTGEPTKGKTSPETILRQLTTKKGQVYS 354
Query: 1224 LLQGKRDVETVLTMGIMEDVSIIPQPAGDTGKVDLIMNVVERVXXXXXXXXXXXXXXXXX 1045
+LQGKRDV+TVL MGIMEDVSIIPQPAGD+GKVDLIMN VER
Sbjct: 355 MLQGKRDVDTVLAMGIMEDVSIIPQPAGDSGKVDLIMNCVERPSGGFSAGGGISSGITSG 414
Query: 1044 XXXGLVGSFAYSHRNVFGRNQKLNVSWERGQIDSIFRINYTDPWIEGDDKRTSRSIMVQN 865
GL+GSFAYSHRN+FGRNQKLNVS ERGQIDSIFRINYTDPWIEGDDKRTSRSIMVQN
Sbjct: 415 PLSGLIGSFAYSHRNLFGRNQKLNVSLERGQIDSIFRINYTDPWIEGDDKRTSRSIMVQN 474
Query: 864 SRTPGTLVHGNQPDSSNVTIGRITAGIEFSRPIRPKWSGTAGIIYQRAGARDERGNPLRK 685
SRTPG LVHGNQPD+S++TIGR+TAG+E+SRP RPKW+GTAG+I+Q AGARDE+GNP+ K
Sbjct: 475 SRTPGNLVHGNQPDNSSLTIGRVTAGVEYSRPFRPKWNGTAGLIFQHAGARDEQGNPIIK 534
Query: 684 DYYSSPLTASGNTHDDMLLAKLESVYTDSGDHGSSMLVFNMEQGLPVMAEWLSFNRVNAR 505
D+YSSPLTASG HD+ +LAKLES+YT SGD GS+M FNMEQGLPV+ EWL FNRV R
Sbjct: 535 DFYSSPLTASGKPHDETMLAKLESIYTGSGDQGSTMFAFNMEQGLPVLPEWLCFNRVTGR 594
Query: 504 ARKGVELGPARFLLSLSGGHVVGSFSPHEAFAIGGTNSVRGYEEGAXXXXXXXXXXXXXX 325
ARKG+ +GPARFL SLSGGHVVG FSPHEAF IGGTNSVRGYEEGA
Sbjct: 595 ARKGIHIGPARFLFSLSGGHVVGKFSPHEAFVIGGTNSVRGYEEGAVGSGRSYVVGSGEL 654
Query: 324 SFPMFGPVEGALFADYGSDLGSGPMVPGDPAGARLKPGSGYGYGFGIRVDSPLGPLRLEY 145
SFP+ GPVEG +F DYG+D+GSG VPGDPAGARLKPGSGYGYG G+RVDSPLGPLRLEY
Sbjct: 655 SFPVRGPVEGVIFTDYGTDMGSGSTVPGDPAGARLKPGSGYGYGLGVRVDSPLGPLRLEY 714
Query: 144 AFNDKHARRFHFGVGHRN 91
AFND+HA RFHFGVG RN
Sbjct: 715 AFNDQHAGRFHFGVGLRN 732