BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00028100
         (961 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269920.2| PREDICTED: DNA polymerase epsilon catalytic ...   595   e-168
emb|CBI17056.3| unnamed protein product [Vitis vinifera]              595   e-168
ref|XP_002529065.1| DNA polymerase epsilon, catalytic subunit, p...   592   e-167
ref|XP_002328167.1| predicted protein [Populus trichocarpa] gi|2...   587   e-165
ref|XP_003540789.1| PREDICTED: DNA polymerase epsilon catalytic ...   586   e-165

>ref|XP_002269920.2| PREDICTED: DNA polymerase epsilon catalytic subunit A [Vitis
            vinifera]
          Length = 2214

 Score =  595 bits (1534), Expect = e-168
 Identities = 288/319 (90%), Positives = 306/319 (95%)
 Frame = +3

Query: 3    ELVDRVDGQWSKSFLDLPKTEQQTKLKDRLKKYCQKAYKRVLDKPVTELQEAGICMRENP 182
            ELVD  D ++SKSF+DLPKTEQQ KLK+RLKKYCQKAYKRVLDKP TEL+EAGICMREN 
Sbjct: 665  ELVDGGDSRFSKSFIDLPKTEQQLKLKERLKKYCQKAYKRVLDKPATELREAGICMRENS 724

Query: 183  FYVDTVRSFRDRRYEYKGLNKVWKGKLADAKASGNSIKIQEAQDMAVVYDSLQLAHKCIL 362
            FY+DTVRSFRDRRYEYKGLNKVWKGKL++AKASGNSI+IQEAQDM V+YDSLQLAHKCIL
Sbjct: 725  FYIDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIRIQEAQDMVVLYDSLQLAHKCIL 784

Query: 363  NSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLVEKIGRPLELDTDGIWCALPGSF 542
            NSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLL+EKIGRPLELDTDGIWC LPGSF
Sbjct: 785  NSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGRPLELDTDGIWCVLPGSF 844

Query: 543  PENFTFKTIDLKRKLTISYPCVMLNVDVARNNTNDQYQTLSDPVSKTYTTHSECSIEFEV 722
            PENFTF+T DLK+KLTISYPCVMLNVDVARNNTNDQYQTL DP++KTY THSECSIEFEV
Sbjct: 845  PENFTFRTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPINKTYATHSECSIEFEV 904

Query: 723  DGPYKAMILPASKEEGILIKKRYAIFNDDGTLAELKGFEIKRRGELKLIKVFQAEVFDKF 902
            DGPYKAMILPASKEEGILIKKRYA+FNDDGTLAELKGFEIKRRGELKLIKVFQAE+FDKF
Sbjct: 905  DGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKF 964

Query: 903  LHGKTLEECYSAVASVPNR 959
            LHG TLEECY+AVASV NR
Sbjct: 965  LHGSTLEECYAAVASVANR 983


>emb|CBI17056.3| unnamed protein product [Vitis vinifera]
          Length = 2723

 Score =  595 bits (1534), Expect = e-168
 Identities = 288/319 (90%), Positives = 306/319 (95%)
 Frame = +3

Query: 3    ELVDRVDGQWSKSFLDLPKTEQQTKLKDRLKKYCQKAYKRVLDKPVTELQEAGICMRENP 182
            ELVD  D ++SKSF+DLPKTEQQ KLK+RLKKYCQKAYKRVLDKP TEL+EAGICMREN 
Sbjct: 1139 ELVDGGDSRFSKSFIDLPKTEQQLKLKERLKKYCQKAYKRVLDKPATELREAGICMRENS 1198

Query: 183  FYVDTVRSFRDRRYEYKGLNKVWKGKLADAKASGNSIKIQEAQDMAVVYDSLQLAHKCIL 362
            FY+DTVRSFRDRRYEYKGLNKVWKGKL++AKASGNSI+IQEAQDM V+YDSLQLAHKCIL
Sbjct: 1199 FYIDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIRIQEAQDMVVLYDSLQLAHKCIL 1258

Query: 363  NSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLVEKIGRPLELDTDGIWCALPGSF 542
            NSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLL+EKIGRPLELDTDGIWC LPGSF
Sbjct: 1259 NSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGRPLELDTDGIWCVLPGSF 1318

Query: 543  PENFTFKTIDLKRKLTISYPCVMLNVDVARNNTNDQYQTLSDPVSKTYTTHSECSIEFEV 722
            PENFTF+T DLK+KLTISYPCVMLNVDVARNNTNDQYQTL DP++KTY THSECSIEFEV
Sbjct: 1319 PENFTFRTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPINKTYATHSECSIEFEV 1378

Query: 723  DGPYKAMILPASKEEGILIKKRYAIFNDDGTLAELKGFEIKRRGELKLIKVFQAEVFDKF 902
            DGPYKAMILPASKEEGILIKKRYA+FNDDGTLAELKGFEIKRRGELKLIKVFQAE+FDKF
Sbjct: 1379 DGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKF 1438

Query: 903  LHGKTLEECYSAVASVPNR 959
            LHG TLEECY+AVASV NR
Sbjct: 1439 LHGSTLEECYAAVASVANR 1457


>ref|XP_002529065.1| DNA polymerase epsilon, catalytic subunit, putative [Ricinus
            communis] gi|223531477|gb|EEF33309.1| DNA polymerase
            epsilon, catalytic subunit, putative [Ricinus communis]
          Length = 2227

 Score =  592 bits (1527), Expect = e-167
 Identities = 287/319 (89%), Positives = 304/319 (95%)
 Frame = +3

Query: 3    ELVDRVDGQWSKSFLDLPKTEQQTKLKDRLKKYCQKAYKRVLDKPVTELQEAGICMRENP 182
            E VD +DGQ SK FLDLPK EQQ+KLK+RLKKYCQKAYKRV+DKPVTEL+EAGICMRENP
Sbjct: 667  EFVDGIDGQLSKPFLDLPKVEQQSKLKERLKKYCQKAYKRVIDKPVTELREAGICMRENP 726

Query: 183  FYVDTVRSFRDRRYEYKGLNKVWKGKLADAKASGNSIKIQEAQDMAVVYDSLQLAHKCIL 362
            FYVDTVRSFRDRRYEYKGLNK+WKGKL++AK SGN IKIQEAQDM V+YDSLQLAHKCIL
Sbjct: 727  FYVDTVRSFRDRRYEYKGLNKLWKGKLSEAKTSGNPIKIQEAQDMVVLYDSLQLAHKCIL 786

Query: 363  NSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLVEKIGRPLELDTDGIWCALPGSF 542
            NSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLVEKIG+PLELDTDGIWC LPGSF
Sbjct: 787  NSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLVEKIGKPLELDTDGIWCVLPGSF 846

Query: 543  PENFTFKTIDLKRKLTISYPCVMLNVDVARNNTNDQYQTLSDPVSKTYTTHSECSIEFEV 722
            PENFTFKT DLK+KLTISYPCVMLNVDVARNNTN+QYQTL DP++KTY THSECSIEFEV
Sbjct: 847  PENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNEQYQTLVDPLNKTYATHSECSIEFEV 906

Query: 723  DGPYKAMILPASKEEGILIKKRYAIFNDDGTLAELKGFEIKRRGELKLIKVFQAEVFDKF 902
            DGPYKAMILPASKEEGILIKKRYA+FNDDGTLAELKGFEIKRRGELKLIKVFQAE+FDKF
Sbjct: 907  DGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKF 966

Query: 903  LHGKTLEECYSAVASVPNR 959
            LHG TLE CYSAVA+V NR
Sbjct: 967  LHGSTLEGCYSAVAAVANR 985


>ref|XP_002328167.1| predicted protein [Populus trichocarpa] gi|222837682|gb|EEE76047.1|
            predicted protein [Populus trichocarpa]
          Length = 2221

 Score =  587 bits (1514), Expect = e-165
 Identities = 286/319 (89%), Positives = 303/319 (94%)
 Frame = +3

Query: 3    ELVDRVDGQWSKSFLDLPKTEQQTKLKDRLKKYCQKAYKRVLDKPVTELQEAGICMRENP 182
            E VD  DGQ+SKSFLDL K +QQ+KLK+RLKKYCQKAYKRVLDKPVTE++EAGICMREN 
Sbjct: 666  EFVDGTDGQFSKSFLDLSKMDQQSKLKERLKKYCQKAYKRVLDKPVTEVREAGICMRENS 725

Query: 183  FYVDTVRSFRDRRYEYKGLNKVWKGKLADAKASGNSIKIQEAQDMAVVYDSLQLAHKCIL 362
            FYVDTVRSFRDRRYEYKGLNKVWKGKL++AKASGNSIKIQEA DM V+YDSLQLAHKCIL
Sbjct: 726  FYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAHDMVVLYDSLQLAHKCIL 785

Query: 363  NSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLVEKIGRPLELDTDGIWCALPGSF 542
            NSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLV+KIG+PLELDTDGIWC LPG F
Sbjct: 786  NSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLVDKIGKPLELDTDGIWCVLPGCF 845

Query: 543  PENFTFKTIDLKRKLTISYPCVMLNVDVARNNTNDQYQTLSDPVSKTYTTHSECSIEFEV 722
            PENFTFKT D K+KLTISYPCVMLNVDVARNNTN+QYQTL DPV+KTY THSECSIEFEV
Sbjct: 846  PENFTFKTKDSKKKLTISYPCVMLNVDVARNNTNEQYQTLVDPVNKTYATHSECSIEFEV 905

Query: 723  DGPYKAMILPASKEEGILIKKRYAIFNDDGTLAELKGFEIKRRGELKLIKVFQAEVFDKF 902
            DGPYKAMILPASKEEGILIKKRYA+FNDDGTLAELKGFEIKRRGELKLIKVFQAE+FDKF
Sbjct: 906  DGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKF 965

Query: 903  LHGKTLEECYSAVASVPNR 959
            LHG TLEECYSAVA+V NR
Sbjct: 966  LHGSTLEECYSAVAAVANR 984


>ref|XP_003540789.1| PREDICTED: DNA polymerase epsilon catalytic subunit A-like [Glycine
            max]
          Length = 2207

 Score =  586 bits (1511), Expect = e-165
 Identities = 285/308 (92%), Positives = 299/308 (97%)
 Frame = +3

Query: 33   SKSFLDLPKTEQQTKLKDRLKKYCQKAYKRVLDKPVTELQEAGICMRENPFYVDTVRSFR 212
            SKSFLDLPK EQQ++LK+RLKKYCQKAYKRVLDKPVTEL+EAGICMRENPFYVDTVRSFR
Sbjct: 686  SKSFLDLPKAEQQSRLKERLKKYCQKAYKRVLDKPVTELREAGICMRENPFYVDTVRSFR 745

Query: 213  DRRYEYKGLNKVWKGKLADAKASGNSIKIQEAQDMAVVYDSLQLAHKCILNSFYGYVMRK 392
            DRRYEYKGLNKVWKGKL++AKASGNS+KIQEAQDM V+YDSLQLAHKCILNSFYGYVMRK
Sbjct: 746  DRRYEYKGLNKVWKGKLSEAKASGNSMKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRK 805

Query: 393  GARWYSMEMAGVVTYTGAKIIQNARLLVEKIGRPLELDTDGIWCALPGSFPENFTFKTID 572
            GARWYSMEMAGVVTYTGAKIIQNARLLVEKIG+PLELDTDGIWCALPGSFPENFTFKT D
Sbjct: 806  GARWYSMEMAGVVTYTGAKIIQNARLLVEKIGKPLELDTDGIWCALPGSFPENFTFKTKD 865

Query: 573  LKRKLTISYPCVMLNVDVARNNTNDQYQTLSDPVSKTYTTHSECSIEFEVDGPYKAMILP 752
             K+K TISYPCVMLNVDVA NNTNDQYQTL+DP+ KTYTTHSECSIEFEVDGPYKAMILP
Sbjct: 866  PKKKFTISYPCVMLNVDVAINNTNDQYQTLTDPIRKTYTTHSECSIEFEVDGPYKAMILP 925

Query: 753  ASKEEGILIKKRYAIFNDDGTLAELKGFEIKRRGELKLIKVFQAEVFDKFLHGKTLEECY 932
            ASKEEGILIKKRYA+FNDDGTLAELKGFEIKRRGELKLIKVFQAE+FDKFLHG TLEECY
Sbjct: 926  ASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTLEECY 985

Query: 933  SAVASVPN 956
            SAVASV N
Sbjct: 986  SAVASVAN 993