BLASTX nr result

ID: Coptis21_contig00028097 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00028097
         (739 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004141854.1| PREDICTED: galactomannan galactosyltransfera...   216   3e-54
ref|XP_002525290.1| transferase, putative [Ricinus communis] gi|...   207   2e-51
ref|XP_002310890.1| predicted protein [Populus trichocarpa] gi|2...   204   2e-50
ref|XP_002320005.1| predicted protein [Populus trichocarpa] gi|2...   202   5e-50
ref|XP_003611556.1| Galactomannan galactosyltransferase [Medicag...   194   2e-47

>ref|XP_004141854.1| PREDICTED: galactomannan galactosyltransferase 1-like [Cucumis
           sativus] gi|449521315|ref|XP_004167675.1| PREDICTED:
           galactomannan galactosyltransferase 1-like [Cucumis
           sativus]
          Length = 444

 Score =  216 bits (551), Expect = 3e-54
 Identities = 110/189 (58%), Positives = 127/189 (67%), Gaps = 1/189 (0%)
 Frame = -1

Query: 565 MVSPDQSPLQTTMAKPYFPLRNKHTSLLTDIFLFVGGSITALLLIWSFWSFFSPTXXXXX 386
           M+SP  S    +MAKP   LR++ ++ L D+F F+ GS  ALLL+W+F SF  P+     
Sbjct: 1   MLSPHSS--SPSMAKP--TLRHRASACLADVFRFLVGSFLALLLLWTFSSFLIPSSSNFD 56

Query: 385 XXXXXXXXXXIK-PQXXXXXXXXXXXXPTFYDDPNLSYSIEKPIKNWDEKRRIWLSHHPS 209
                      +  Q             TFYDDP LSYSI+KPIKNWDEKRR WL HHPS
Sbjct: 57  SLHPPDFASSSRNSQNQYPSLAYDPPDITFYDDPKLSYSIQKPIKNWDEKRRHWLKHHPS 116

Query: 208 FATGVRERILLVTGSQPSACRNPIGDHLLLRFFKNKVDYCRIHGYDIFYNNALFHPKMTT 29
           FA G  ER+LL+T SQP  CRNPIGDHLLLRFFKNKVDYCRIHGYDIFYNNAL  PKM +
Sbjct: 117 FAAGASERVLLITASQPKPCRNPIGDHLLLRFFKNKVDYCRIHGYDIFYNNALLQPKMFS 176

Query: 28  FWAKLPVVR 2
           +WAKLPVVR
Sbjct: 177 YWAKLPVVR 185


>ref|XP_002525290.1| transferase, putative [Ricinus communis]
           gi|223535448|gb|EEF37118.1| transferase, putative
           [Ricinus communis]
          Length = 446

 Score =  207 bits (527), Expect = 2e-51
 Identities = 100/188 (53%), Positives = 121/188 (64%)
 Frame = -1

Query: 565 MVSPDQSPLQTTMAKPYFPLRNKHTSLLTDIFLFVGGSITALLLIWSFWSFFSPTXXXXX 386
           MVSP+ S  Q      Y P+  K  S  +D FL++GG++ + L+IWS WS+ +P      
Sbjct: 1   MVSPEVSKSQ------YSPMA-KRKSCFSDTFLYLGGALLSFLIIWSLWSYTAPNINLSD 53

Query: 385 XXXXXXXXXXIKPQXXXXXXXXXXXXPTFYDDPNLSYSIEKPIKNWDEKRRIWLSHHPSF 206
                        Q             TFYDDP+LSYSIEKPIKNWDEKR+ WL  HPSF
Sbjct: 54  SSSSNLRKQTCVQQNPSPDLGYDPPDTTFYDDPDLSYSIEKPIKNWDEKRKRWLEKHPSF 113

Query: 205 ATGVRERILLVTGSQPSACRNPIGDHLLLRFFKNKVDYCRIHGYDIFYNNALFHPKMTTF 26
           +   R+R+++VTGSQ   C+NPIGDH LLRFFKNKVDYCRIHGYDIFYNN L HPKM +F
Sbjct: 114 SAPARDRVVMVTGSQTKPCKNPIGDHFLLRFFKNKVDYCRIHGYDIFYNNVLLHPKMPSF 173

Query: 25  WAKLPVVR 2
           WAK PVV+
Sbjct: 174 WAKYPVVK 181


>ref|XP_002310890.1| predicted protein [Populus trichocarpa] gi|222853793|gb|EEE91340.1|
           predicted protein [Populus trichocarpa]
          Length = 457

 Score =  204 bits (519), Expect = 2e-50
 Identities = 106/197 (53%), Positives = 128/197 (64%), Gaps = 9/197 (4%)
 Frame = -1

Query: 565 MVSPDQSPLQTT---MAKPYFPLRNKHTSLLTDIFLFVGGSITALLLIWSFWSF-----F 410
           MV+P+ S  ++    MAK    +R K +S  +D  L++G ++ A LL+WS WS+     F
Sbjct: 1   MVTPELSQSKSQFSPMAKS--SVRTKPSSCFSDGSLYLGAALLAFLLVWSLWSYALSRNF 58

Query: 409 SP-TXXXXXXXXXXXXXXXIKPQXXXXXXXXXXXXPTFYDDPNLSYSIEKPIKNWDEKRR 233
            P T                 P+             TFYDD  LSYSIEKPIKNWDEKR+
Sbjct: 59  DPKTSAKSVANTHAHECVQENPEVSLHYDPPDQ---TFYDDQELSYSIEKPIKNWDEKRK 115

Query: 232 IWLSHHPSFATGVRERILLVTGSQPSACRNPIGDHLLLRFFKNKVDYCRIHGYDIFYNNA 53
            WL HHPSFA G R+R++LVTGSQP  C+NPIGDHLLLRFFKNKVDYCRIHGYDIFYNN 
Sbjct: 116 EWLKHHPSFAPGARDRVVLVTGSQPKPCKNPIGDHLLLRFFKNKVDYCRIHGYDIFYNNV 175

Query: 52  LFHPKMTTFWAKLPVVR 2
           L HPKM ++WAKLPVV+
Sbjct: 176 LLHPKMHSYWAKLPVVK 192


>ref|XP_002320005.1| predicted protein [Populus trichocarpa] gi|222860778|gb|EEE98320.1|
           predicted protein [Populus trichocarpa]
          Length = 458

 Score =  202 bits (515), Expect = 5e-50
 Identities = 100/189 (52%), Positives = 120/189 (63%), Gaps = 4/189 (2%)
 Frame = -1

Query: 556 PDQSPLQTTMAKPYFPLRNKHTSLLTDIFLFVGGSITALLLIWSFWSFFSPTXXXXXXXX 377
           P      + MAK    +RNK  S  +D FL++GG++ A LL+WS WS+  P         
Sbjct: 7   PQNKSQYSPMAKS--SVRNKPFSCFSDGFLYLGGALFAFLLVWSLWSYTVPHSFEPRGST 64

Query: 376 XXXXXXXIKPQXXXXXXXXXXXXP----TFYDDPNLSYSIEKPIKNWDEKRRIWLSHHPS 209
                     Q                 TFYDD  LSYSIE+P+KNWDEKR+ WL  HPS
Sbjct: 65  KSATNDARTQQCVQENPAVNLGYDPPDQTFYDDQELSYSIERPMKNWDEKRKEWLKRHPS 124

Query: 208 FATGVRERILLVTGSQPSACRNPIGDHLLLRFFKNKVDYCRIHGYDIFYNNALFHPKMTT 29
           FA G R+R++LVTGSQ   C+NPIGDHLLLRFFKNKVDYCRIHGYDIFYNN L HPKM++
Sbjct: 125 FAPGARDRVVLVTGSQSKPCKNPIGDHLLLRFFKNKVDYCRIHGYDIFYNNVLLHPKMSS 184

Query: 28  FWAKLPVVR 2
           +WAKLPVV+
Sbjct: 185 YWAKLPVVK 193


>ref|XP_003611556.1| Galactomannan galactosyltransferase [Medicago truncatula]
           gi|355512891|gb|AES94514.1| Galactomannan
           galactosyltransferase [Medicago truncatula]
          Length = 446

 Score =  194 bits (492), Expect = 2e-47
 Identities = 97/183 (53%), Positives = 119/183 (65%), Gaps = 1/183 (0%)
 Frame = -1

Query: 547 SPLQTTMAKPYFPLRNKHTSL-LTDIFLFVGGSITALLLIWSFWSFFSPTXXXXXXXXXX 371
           S   + MAKP    RNK +S+ L+D FLF+GG+ +ALLL+W F SF +P           
Sbjct: 9   SHFSSIMAKPI--PRNKSSSIFLSDGFLFLGGAFSALLLVWGFSSFTNPIPNDNLTLKSH 66

Query: 370 XXXXXIKPQXXXXXXXXXXXXPTFYDDPNLSYSIEKPIKNWDEKRRIWLSHHPSFATGVR 191
                                 TFYDDP + Y++   +++WDEKR  WL HHPSF+ G +
Sbjct: 67  KNNVV---SYSTPDLRFDPPDQTFYDDPEMEYTMSVKLEDWDEKREEWLKHHPSFSAGAK 123

Query: 190 ERILLVTGSQPSACRNPIGDHLLLRFFKNKVDYCRIHGYDIFYNNALFHPKMTTFWAKLP 11
           ER+L+VTGSQPS C+NPIGDHLLLRFFKNKVDY RIHGYDIFYNNAL HPKM  +WAK P
Sbjct: 124 ERVLMVTGSQPSPCKNPIGDHLLLRFFKNKVDYSRIHGYDIFYNNALLHPKMFAYWAKYP 183

Query: 10  VVR 2
           VV+
Sbjct: 184 VVK 186


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