BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00028032
         (409 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15765.3| unnamed protein product [Vitis vinifera]              142   3e-32
ref|XP_002280974.1| PREDICTED: pentatricopeptide repeat-containi...   142   3e-32
emb|CAN83162.1| hypothetical protein VITISV_022557 [Vitis vinifera]   142   3e-32
ref|XP_002511082.1| pentatricopeptide repeat-containing protein,...   116   2e-24
ref|XP_004155710.1| PREDICTED: pentatricopeptide repeat-containi...   115   4e-24

>emb|CBI15765.3| unnamed protein product [Vitis vinifera]
          Length = 375

 Score =  142 bits (358), Expect = 3e-32
 Identities = 65/134 (48%), Positives = 91/134 (67%)
 Frame = -3

Query: 404 ALETHSRVIKCGFESYPXXXXXXXXVYAVCGWPDYGHRVSDEIPDWGFSVVLGNVIIGSY 225
           A ++H+++IK G+ +YP         YA C   D  H++ DE+P WGF ++  N+II S 
Sbjct: 66  AFQSHAKIIKFGYGTYPSLITSLVSTYAHCDCLDLAHQLLDEMPYWGFDLITANLIIASL 125

Query: 224 LRMGGFDEANWVFRRMGHRDVVSWNTMIAGCVKNARPKEAISFFRKMLKSGFEPDGFSFA 45
           +++G FD A  VFR+M  RDVV+WN+MI GCV+N R +EA+ FFR+ML S  EPDGF+FA
Sbjct: 126 MKVGEFDFAKRVFRKMLRRDVVTWNSMIGGCVRNERFEEALRFFREMLNSNVEPDGFTFA 185

Query: 44  SVLTACGRLGALSH 3
           SV+  C RLG+  H
Sbjct: 186 SVINGCARLGSSHH 199


>ref|XP_002280974.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50990
           [Vitis vinifera]
          Length = 523

 Score =  142 bits (358), Expect = 3e-32
 Identities = 65/134 (48%), Positives = 91/134 (67%)
 Frame = -3

Query: 404 ALETHSRVIKCGFESYPXXXXXXXXVYAVCGWPDYGHRVSDEIPDWGFSVVLGNVIIGSY 225
           A ++H+++IK G+ +YP         YA C   D  H++ DE+P WGF ++  N+II S 
Sbjct: 39  AFQSHAKIIKFGYGTYPSLITSLVSTYAHCDCLDLAHQLLDEMPYWGFDLITANLIIASL 98

Query: 224 LRMGGFDEANWVFRRMGHRDVVSWNTMIAGCVKNARPKEAISFFRKMLKSGFEPDGFSFA 45
           +++G FD A  VFR+M  RDVV+WN+MI GCV+N R +EA+ FFR+ML S  EPDGF+FA
Sbjct: 99  MKVGEFDFAKRVFRKMLRRDVVTWNSMIGGCVRNERFEEALRFFREMLNSNVEPDGFTFA 158

Query: 44  SVLTACGRLGALSH 3
           SV+  C RLG+  H
Sbjct: 159 SVINGCARLGSSHH 172


>emb|CAN83162.1| hypothetical protein VITISV_022557 [Vitis vinifera]
          Length = 562

 Score =  142 bits (358), Expect = 3e-32
 Identities = 65/134 (48%), Positives = 91/134 (67%)
 Frame = -3

Query: 404 ALETHSRVIKCGFESYPXXXXXXXXVYAVCGWPDYGHRVSDEIPDWGFSVVLGNVIIGSY 225
           A ++H+++IK G+ +YP         YA C   D  H++ DE+P WGF ++  N+II S 
Sbjct: 78  AFQSHAKIIKFGYGTYPSLITSLVSTYAHCDCLDLAHQLLDEMPYWGFDLITANLIIASL 137

Query: 224 LRMGGFDEANWVFRRMGHRDVVSWNTMIAGCVKNARPKEAISFFRKMLKSGFEPDGFSFA 45
           +++G FD A  VFR+M  RDVV+WN+MI GCV+N R +EA+ FFR+ML S  EPDGF+FA
Sbjct: 138 MKVGEFDFAKRVFRKMLRRDVVTWNSMIGGCVRNERFEEALRFFREMLNSNVEPDGFTFA 197

Query: 44  SVLTACGRLGALSH 3
           SV+  C RLG+  H
Sbjct: 198 SVINGCARLGSSHH 211


>ref|XP_002511082.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223550197|gb|EEF51684.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 274

 Score =  116 bits (290), Expect = 2e-24
 Identities = 59/134 (44%), Positives = 86/134 (64%)
 Frame = -3

Query: 404 ALETHSRVIKCGFESYPXXXXXXXXVYAVCGWPDYGHRVSDEIPDWGFSVVLGNVIIGSY 225
           A+ETH+R+I+ G+ +YP         Y  C   +    V +++  W  ++V  N++I + 
Sbjct: 29  AIETHARIIRFGYGTYPSLAASLVSTYVKCDHFNLACEVINQVFSWTVNLVALNLVIDNI 88

Query: 224 LRMGGFDEANWVFRRMGHRDVVSWNTMIAGCVKNARPKEAISFFRKMLKSGFEPDGFSFA 45
           +R+G  + A  VF +M  RDVV+WN++I G VKNAR +EA+ FFR ML S  EPD F+FA
Sbjct: 89  MRVGECEIAKKVFYKMPARDVVTWNSLIGGYVKNARFEEALRFFRVMLGSDIEPDKFTFA 148

Query: 44  SVLTACGRLGALSH 3
           SV+TAC RLGAL +
Sbjct: 149 SVITACARLGALDN 162


>ref|XP_004155710.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g50990-like [Cucumis sativus]
          Length = 376

 Score =  115 bits (288), Expect = 4e-24
 Identities = 58/133 (43%), Positives = 85/133 (63%)
 Frame = -3

Query: 401 LETHSRVIKCGFESYPXXXXXXXXVYAVCGWPDYGHRVSDEIPDWGFSVVLGNVIIGSYL 222
           +ETH+R+IK G+ +YP         Y   G  +  H++ D +      +V  N++IG+++
Sbjct: 55  IETHARIIKFGYGNYPTLIASLVSTYQRVGCLNRVHQLLDILCSKQLDLVAMNLLIGNFM 114

Query: 221 RMGGFDEANWVFRRMGHRDVVSWNTMIAGCVKNARPKEAISFFRKMLKSGFEPDGFSFAS 42
           ++G    A  VF +M  RDVV+WN++I GCVKNAR  EA  FFR+ML S  +PDGF+FAS
Sbjct: 115 KIGECKFAKKVFYKMPFRDVVTWNSIIGGCVKNARYDEAFRFFRQMLTSNIQPDGFTFAS 174

Query: 41  VLTACGRLGALSH 3
           +L AC +LGA S+
Sbjct: 175 ILNACAQLGAPSN 187