BLASTX nr result

ID: Coptis21_contig00027958 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00027958
         (288 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520499.1| d-lactate dehydrogenase, putative [Ricinus c...   123   2e-26
emb|CBI38702.3| unnamed protein product [Vitis vinifera]              113   1e-23
ref|XP_002302668.1| predicted protein [Populus trichocarpa] gi|2...   111   7e-23
emb|CAZ68129.1| FAD-binding domain-containing protein [Arabidops...   110   2e-22
ref|XP_002529978.1| gulonolactone oxidase, putative [Ricinus com...   110   2e-22

>ref|XP_002520499.1| d-lactate dehydrogenase, putative [Ricinus communis]
           gi|223540341|gb|EEF41912.1| d-lactate dehydrogenase,
           putative [Ricinus communis]
          Length = 579

 Score =  123 bits (308), Expect = 2e-26
 Identities = 53/85 (62%), Positives = 71/85 (83%)
 Frame = +2

Query: 32  RSILRLQCMFLVVYVVFSSPPEDPVKCSLQNKNCTITNSYGAFPDRTVCRAAEVVYPTTE 211
           R +LRL C+FL+ ++V S+PPEDP++C+ +N NCTITNSYG FPDR++C+AA V YPTTE
Sbjct: 5   RLLLRLTCLFLLFFIVISTPPEDPIECTSRNTNCTITNSYGTFPDRSICQAANVAYPTTE 64

Query: 212 KELIAAVAQASIDKRKVKVVTKYSH 286
           +ELI+ VA A+  KRK+KV T+YSH
Sbjct: 65  EELISVVANATKAKRKMKVATRYSH 89


>emb|CBI38702.3| unnamed protein product [Vitis vinifera]
          Length = 530

 Score =  113 bits (283), Expect = 1e-23
 Identities = 50/85 (58%), Positives = 69/85 (81%)
 Frame = +2

Query: 32  RSILRLQCMFLVVYVVFSSPPEDPVKCSLQNKNCTITNSYGAFPDRTVCRAAEVVYPTTE 211
           R I  L+C+ L++ +   SPPEDP+KC+ +N NCTITNSYGAFPDR+ CRA+ V YPTTE
Sbjct: 5   RQIFLLKCLCLLLCMAGCSPPEDPIKCASKNTNCTITNSYGAFPDRSRCRASAVAYPTTE 64

Query: 212 KELIAAVAQASIDKRKVKVVTKYSH 286
           +ELI+ VA+A++D+ K+K VT++SH
Sbjct: 65  EELISVVAKAAMDRTKMKAVTRFSH 89


>ref|XP_002302668.1| predicted protein [Populus trichocarpa] gi|222844394|gb|EEE81941.1|
           predicted protein [Populus trichocarpa]
          Length = 584

 Score =  111 bits (277), Expect = 7e-23
 Identities = 51/85 (60%), Positives = 64/85 (75%)
 Frame = +2

Query: 32  RSILRLQCMFLVVYVVFSSPPEDPVKCSLQNKNCTITNSYGAFPDRTVCRAAEVVYPTTE 211
           R +L   C+ L V++V  SPPE+ +KCS  N NCTITNSYG FPDR++C+AA   YPTTE
Sbjct: 6   RVLLSASCLLLAVFMVGCSPPENHIKCSSTNTNCTITNSYGTFPDRSICQAANAAYPTTE 65

Query: 212 KELIAAVAQASIDKRKVKVVTKYSH 286
           +ELI+ VA A+  KRKVKV T+YSH
Sbjct: 66  EELISIVAAATKAKRKVKVATRYSH 90


>emb|CAZ68129.1| FAD-binding domain-containing protein [Arabidopsis halleri subsp.
           halleri]
          Length = 603

 Score =  110 bits (274), Expect = 2e-22
 Identities = 50/85 (58%), Positives = 62/85 (72%)
 Frame = +2

Query: 32  RSILRLQCMFLVVYVVFSSPPEDPVKCSLQNKNCTITNSYGAFPDRTVCRAAEVVYPTTE 211
           R+I  L C+  +V+   S+PPEDPVKC   N NCT+TNSYG FPDR+ CRAA V YPTTE
Sbjct: 18  RTIFALHCISTLVFTTISTPPEDPVKCVSGNTNCTVTNSYGVFPDRSTCRAANVAYPTTE 77

Query: 212 KELIAAVAQASIDKRKVKVVTKYSH 286
            ELI+ VA A+   RK++V T+YSH
Sbjct: 78  AELISVVAAATKAGRKMRVTTRYSH 102


>ref|XP_002529978.1| gulonolactone oxidase, putative [Ricinus communis]
           gi|223530540|gb|EEF32421.1| gulonolactone oxidase,
           putative [Ricinus communis]
          Length = 589

 Score =  110 bits (274), Expect = 2e-22
 Identities = 49/83 (59%), Positives = 64/83 (77%)
 Frame = +2

Query: 38  ILRLQCMFLVVYVVFSSPPEDPVKCSLQNKNCTITNSYGAFPDRTVCRAAEVVYPTTEKE 217
           +LR   + L++ +  S+PPEDP+KC+  N NCTITNSYG FPDR++CRAA V YPTTE+E
Sbjct: 7   LLRSAFLLLLLGIAVSTPPEDPIKCTSVNINCTITNSYGTFPDRSICRAANVAYPTTEEE 66

Query: 218 LIAAVAQASIDKRKVKVVTKYSH 286
           LI+ VA A+  KRK+K  T+YSH
Sbjct: 67  LISVVANATKSKRKMKAATRYSH 89


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