BLASTX nr result

ID: Coptis21_contig00027955 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00027955
         (580 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281964.1| PREDICTED: probable endopeptidase p60-like [...   112   3e-23
gb|AAS20972.1| cell wall hydrolase, partial [Hyacinthus orientalis]    87   2e-15
emb|CBI22016.3| unnamed protein product [Vitis vinifera]               87   3e-15
gb|ABK21059.1| unknown [Picea sitchensis] gi|148908768|gb|ABR174...    85   1e-14
gb|ABK25848.1| unknown [Picea sitchensis]                              83   3e-14

>ref|XP_002281964.1| PREDICTED: probable endopeptidase p60-like [Vitis vinifera]
          Length = 133

 Score =  112 bits (281), Expect = 3e-23
 Identities = 65/136 (47%), Positives = 80/136 (58%)
 Frame = -2

Query: 573 SGKGNDQGATIARTAGFVVFSGIAVSILKALNPYNKTDNNLTSKNNSFQXXXXXXXXXXX 394
           +G+G+ + A +A+TAGF VFSGIA+SILKALN  N  +N L + + +             
Sbjct: 16  NGEGHSKEAAVAKTAGFFVFSGIAMSILKALNSCNNDNNKLLTHSVT------------- 62

Query: 393 XXXXXXXXXXXXXVASEXXXXXXXXXXXXXLRTVDIVKGDTLWGLSRKHGVTIDAIKEAN 214
                          S               +T+DIVKGDTLWGLSRKHGV+IDAIKEAN
Sbjct: 63  -----EPSQPTDPSHSREPIFKEKEVRESTQKTIDIVKGDTLWGLSRKHGVSIDAIKEAN 117

Query: 213 GLQGNTIYAGKKLVIP 166
           GL G+TIYAGKKLVIP
Sbjct: 118 GLTGDTIYAGKKLVIP 133


>gb|AAS20972.1| cell wall hydrolase, partial [Hyacinthus orientalis]
          Length = 132

 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 53/134 (39%), Positives = 70/134 (52%), Gaps = 2/134 (1%)
 Frame = -2

Query: 561 NDQGATIARTAGFVVFSGIAVSILKALNPYNKTDNNLTSKNNSFQXXXXXXXXXXXXXXX 382
           N + A +A+ AGF+ FSGIA+SI+KAL          TSK +  Q               
Sbjct: 9   NQKHAIVAKAAGFLAFSGIALSIIKAL----------TSKTHQPQPQPQQKPSPSAPPSV 58

Query: 381 XXXXXXXXXVASEXXXXXXXXXXXXXL--RTVDIVKGDTLWGLSRKHGVTIDAIKEANGL 208
                       +                RT++I KGDTLWG+SRK+GVTIDAI+EANG+
Sbjct: 59  PPPNIQSTSKQKQVAAEQAGCGSSSLSASRTIEIAKGDTLWGISRKYGVTIDAIREANGI 118

Query: 207 QGNTIYAGKKLVIP 166
            G+ I+AGKKL+IP
Sbjct: 119 TGDMIFAGKKLIIP 132


>emb|CBI22016.3| unnamed protein product [Vitis vinifera]
          Length = 94

 Score = 86.7 bits (213), Expect = 3e-15
 Identities = 40/45 (88%), Positives = 44/45 (97%)
 Frame = -2

Query: 300 RTVDIVKGDTLWGLSRKHGVTIDAIKEANGLQGNTIYAGKKLVIP 166
           +T+DIVKGDTLWGLSRKHGV+IDAIKEANGL G+TIYAGKKLVIP
Sbjct: 50  KTIDIVKGDTLWGLSRKHGVSIDAIKEANGLTGDTIYAGKKLVIP 94


>gb|ABK21059.1| unknown [Picea sitchensis] gi|148908768|gb|ABR17490.1| unknown
           [Picea sitchensis]
          Length = 148

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 52/141 (36%), Positives = 71/141 (50%), Gaps = 5/141 (3%)
 Frame = -2

Query: 573 SGK--GNDQG---ATIARTAGFVVFSGIAVSILKALNPYNKTDNNLTSKNNSFQXXXXXX 409
           SGK  G D G   A +A +AGFVVF+GIA+S+ KAL P    + +  S+           
Sbjct: 8   SGKSGGKDDGKKDAVVATSAGFVVFTGIALSLFKALWPKKPVEESFISEEAVSTTSTENI 67

Query: 408 XXXXXXXXXXXXXXXXXXVASEXXXXXXXXXXXXXLRTVDIVKGDTLWGLSRKHGVTIDA 229
                                               +T++I KGDTLWGLSRK+GV+++A
Sbjct: 68  FEDLKEKASEVPKAANGVAYDVGKKFQKGGGKKKSNQTIEIFKGDTLWGLSRKYGVSVEA 127

Query: 228 IKEANGLQGNTIYAGKKLVIP 166
           IK ANG   +TIYAG+KL++P
Sbjct: 128 IKAANGFSDDTIYAGEKLILP 148


>gb|ABK25848.1| unknown [Picea sitchensis]
          Length = 152

 Score = 83.2 bits (204), Expect = 3e-14
 Identities = 53/145 (36%), Positives = 73/145 (50%), Gaps = 9/145 (6%)
 Frame = -2

Query: 573 SGK--GNDQG---ATIARTAGFVVFSGIAVSILKALNPYNKTDNNLTSKN----NSFQXX 421
           SGK  G D G   A +A +AGFVVF+GIA+S+ KAL P    + +  S+      S +  
Sbjct: 8   SGKSGGKDDGKKDAVVATSAGFVVFTGIALSLFKALWPKKPVEESFISEEAVSTTSTENI 67

Query: 420 XXXXXXXXXXXXXXXXXXXXXXVASEXXXXXXXXXXXXXLRTVDIVKGDTLWGLSRKHGV 241
                                                   +T++I KGDTLWGLSRK+GV
Sbjct: 68  FEDLKVDAEEKASEVPKAANGVAYDVGKKFQKGGGKKKSNQTIEIFKGDTLWGLSRKYGV 127

Query: 240 TIDAIKEANGLQGNTIYAGKKLVIP 166
           +++AIK ANG   +TIYAG+KL++P
Sbjct: 128 SVEAIKAANGFSDDTIYAGEKLILP 152


Top