BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00027936
         (452 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265047.2| PREDICTED: ribosomal RNA large subunit methy...   248   5e-64
emb|CBI24149.3| unnamed protein product [Vitis vinifera]              244   7e-63
ref|XP_003531813.1| PREDICTED: ribosomal RNA large subunit methy...   241   6e-62
ref|XP_002315078.1| predicted protein [Populus trichocarpa] gi|2...   241   6e-62
ref|XP_004139905.1| PREDICTED: ribosomal RNA large subunit methy...   238   3e-61

>ref|XP_002265047.2| PREDICTED: ribosomal RNA large subunit methyltransferase I-like
           [Vitis vinifera]
          Length = 507

 Score =  248 bits (632), Expect = 5e-64
 Identities = 119/142 (83%), Positives = 133/142 (93%)
 Frame = -2

Query: 451 LELAKENIALNNLDPKRISFLRKDATEFMKEAISRQESWDLVILDPPKLAPRRKDLQGAS 272
           LELA ENI LNNLDP +ISFLR+DATEFMK+A++R ESWD+VILDPPKLAPRRK LQ AS
Sbjct: 366 LELANENIILNNLDPGKISFLRRDATEFMKDAVARNESWDIVILDPPKLAPRRKVLQSAS 425

Query: 271 GMYRNLNSLAMQVTKSGGLLMTCSCSGAMTQSGMFLRVLQGAASMAGRKVTVLRQSGAAC 92
           GMYRNLNSLAMQ+T+ GGLLMTCSCSGAMTQSG F+R+LQGAASMAGRK+T+LRQ+GAAC
Sbjct: 426 GMYRNLNSLAMQLTRRGGLLMTCSCSGAMTQSGTFMRILQGAASMAGRKITLLRQAGAAC 485

Query: 91  DHPIDPSYPEGAYLSNILLRVV 26
           DHPIDPSYPEGAYLSNIL RV+
Sbjct: 486 DHPIDPSYPEGAYLSNILFRVL 507


>emb|CBI24149.3| unnamed protein product [Vitis vinifera]
          Length = 387

 Score =  244 bits (622), Expect = 7e-63
 Identities = 117/142 (82%), Positives = 131/142 (92%)
 Frame = -2

Query: 451 LELAKENIALNNLDPKRISFLRKDATEFMKEAISRQESWDLVILDPPKLAPRRKDLQGAS 272
           LELA ENI LNNLDP +ISFLR+DATEFMK+A++R ESWD+VILDPPKLAPRRK LQ AS
Sbjct: 246 LELANENIILNNLDPGKISFLRRDATEFMKDAVARNESWDIVILDPPKLAPRRKVLQSAS 305

Query: 271 GMYRNLNSLAMQVTKSGGLLMTCSCSGAMTQSGMFLRVLQGAASMAGRKVTVLRQSGAAC 92
           GMYRNLNSLAMQ+T+ GGLLMTCSCSGAMTQSG F+R+LQ  ASMAGRK+T+LRQ+GAAC
Sbjct: 306 GMYRNLNSLAMQLTRRGGLLMTCSCSGAMTQSGTFMRILQATASMAGRKITLLRQAGAAC 365

Query: 91  DHPIDPSYPEGAYLSNILLRVV 26
           DHPIDPSYPEGAYLSNIL RV+
Sbjct: 366 DHPIDPSYPEGAYLSNILFRVL 387


>ref|XP_003531813.1| PREDICTED: ribosomal RNA large subunit methyltransferase I-like
           [Glycine max]
          Length = 444

 Score =  241 bits (614), Expect = 6e-62
 Identities = 115/141 (81%), Positives = 131/141 (92%)
 Frame = -2

Query: 451 LELAKENIALNNLDPKRISFLRKDATEFMKEAISRQESWDLVILDPPKLAPRRKDLQGAS 272
           LELAKEN+ LNN+DP RISFLR+DATEFMK A+ R ESWD+VI+DPPKLAP +K L  AS
Sbjct: 303 LELAKENVVLNNIDPGRISFLREDATEFMKGALLRNESWDIVIIDPPKLAPTKKVLHSAS 362

Query: 271 GMYRNLNSLAMQVTKSGGLLMTCSCSGAMTQSGMFLRVLQGAASMAGRKVTVLRQSGAAC 92
           GMYRNLNSLAMQ+TK GGLLMTCSCSGA+TQSG+F+R+LQGAASMAGR++TVLRQ+GAAC
Sbjct: 363 GMYRNLNSLAMQLTKRGGLLMTCSCSGAVTQSGIFMRILQGAASMAGRRITVLRQAGAAC 422

Query: 91  DHPIDPSYPEGAYLSNILLRV 29
           DHPIDPSYPEGAYL+NILLRV
Sbjct: 423 DHPIDPSYPEGAYLTNILLRV 443


>ref|XP_002315078.1| predicted protein [Populus trichocarpa] gi|222864118|gb|EEF01249.1|
           predicted protein [Populus trichocarpa]
          Length = 387

 Score =  241 bits (614), Expect = 6e-62
 Identities = 117/142 (82%), Positives = 133/142 (93%)
 Frame = -2

Query: 451 LELAKENIALNNLDPKRISFLRKDATEFMKEAISRQESWDLVILDPPKLAPRRKDLQGAS 272
           LELA+ENI LNNLDP RISFLR+DA +FMK A+SR ESWD+VILDPPKLAPR+K LQ AS
Sbjct: 246 LELARENIVLNNLDPGRISFLREDAIQFMKGALSRNESWDIVILDPPKLAPRKKVLQNAS 305

Query: 271 GMYRNLNSLAMQVTKSGGLLMTCSCSGAMTQSGMFLRVLQGAASMAGRKVTVLRQSGAAC 92
           GMYRN+NS+A+++TK GGLLMTCSCSGAMTQSGMFLRVLQGAASMAGRK++VLR++GAA 
Sbjct: 306 GMYRNMNSMALRLTKRGGLLMTCSCSGAMTQSGMFLRVLQGAASMAGRKISVLREAGAAS 365

Query: 91  DHPIDPSYPEGAYLSNILLRVV 26
           DHPIDPSYPEGAYLSNILLRV+
Sbjct: 366 DHPIDPSYPEGAYLSNILLRVL 387


>ref|XP_004139905.1| PREDICTED: ribosomal RNA large subunit methyltransferase I-like
           [Cucumis sativus] gi|449475849|ref|XP_004154569.1|
           PREDICTED: ribosomal RNA large subunit methyltransferase
           I-like [Cucumis sativus]
          Length = 439

 Score =  238 bits (608), Expect = 3e-61
 Identities = 114/142 (80%), Positives = 132/142 (92%)
 Frame = -2

Query: 451 LELAKENIALNNLDPKRISFLRKDATEFMKEAISRQESWDLVILDPPKLAPRRKDLQGAS 272
           LELAKEN+ LN++DP+RISFL+ DAT FMK+A+SR ESWD+VILDPPKLAPR+K LQ AS
Sbjct: 298 LELAKENVVLNSMDPERISFLKADATAFMKDALSRNESWDVVILDPPKLAPRKKVLQTAS 357

Query: 271 GMYRNLNSLAMQVTKSGGLLMTCSCSGAMTQSGMFLRVLQGAASMAGRKVTVLRQSGAAC 92
           GMYRNLNSLAMQ+T+ GG LMTCSCSGAMTQSGMFL++LQGAAS A +K+TVLRQ+GAAC
Sbjct: 358 GMYRNLNSLAMQLTRKGGFLMTCSCSGAMTQSGMFLQILQGAASTAKKKITVLRQAGAAC 417

Query: 91  DHPIDPSYPEGAYLSNILLRVV 26
           DHPIDP+YPEGAYLSNILLRV+
Sbjct: 418 DHPIDPTYPEGAYLSNILLRVL 439