BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00027827
         (368 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003528143.1| PREDICTED: uncharacterized protein LOC100778...    49   4e-07
emb|CAN81442.1| hypothetical protein VITISV_011546 [Vitis vinifera]    49   7e-07
gb|ABN08564.1| RNA-directed DNA polymerase (Reverse transcriptas...    50   1e-06
emb|CAN81661.1| hypothetical protein VITISV_006044 [Vitis vinifera]    52   1e-06
ref|XP_003530391.1| PREDICTED: uncharacterized protein LOC100804...    57   2e-06

>ref|XP_003528143.1| PREDICTED: uncharacterized protein LOC100778359 [Glycine max]
          Length = 2621

 Score = 48.5 bits (114), Expect(3) = 4e-07
 Identities = 19/32 (59%), Positives = 27/32 (84%)
 Frame = -2

Query: 169  VCKLDFVKAFDSLSWSFLDYVLERIGFCLKWI 74
            + K+D+ KA+DS+SW+FL Y+L+R GFC KWI
Sbjct: 1240 IFKVDYEKAYDSVSWNFLLYMLKRTGFCPKWI 1271



 Score = 27.3 bits (59), Expect(3) = 4e-07
 Identities = 10/30 (33%), Positives = 21/30 (70%)
 Frame = -1

Query: 287  IPSIFSKFESSSVEGRRQNDEVLVENQLMD 198
            +P+I ++ +S+ +EGR     VL+ N+++D
Sbjct: 1200 LPTIINEAQSAFIEGRHLLQSVLIANEVID 1229



 Score = 21.9 bits (45), Expect(3) = 4e-07
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = -3

Query: 366  Y*AYSLLGGAYKIIAKNLIIRL 301
            Y   SL+G  YKI+AK L  R+
Sbjct: 1175 YRPISLIGCMYKIVAKILAKRI 1196


>emb|CAN81442.1| hypothetical protein VITISV_011546 [Vitis vinifera]
          Length = 843

 Score = 48.5 bits (114), Expect(3) = 7e-07
 Identities = 23/47 (48%), Positives = 30/47 (63%)
 Frame = -2

Query: 199 TRRR*GNNGFVCKLDFVKAFDSLSWSFLDYVLERIGFCLKWIPVIAF 59
           +R+R    G VCKLD  KA+D ++W FL  VLE++GF  KW   I F
Sbjct: 200 SRKRSAXAGLVCKLDIEKAYDHVNWKFLLSVLEKMGFXPKWRSWILF 246



 Score = 24.6 bits (52), Expect(3) = 7e-07
 Identities = 13/18 (72%), Positives = 13/18 (72%)
 Frame = -3

Query: 354 SLLGGAYKIIAKNLIIRL 301
           SLLG  YKIIAK L  RL
Sbjct: 149 SLLGSLYKIIAKVLANRL 166



 Score = 23.9 bits (50), Expect(3) = 7e-07
 Identities = 11/30 (36%), Positives = 20/30 (66%)
 Frame = -1

Query: 278 IFSKFESSSVEGRRQNDEVLVENQLMDTEE 189
           + S  +++ VEGR+  D VLV N+ +D+ +
Sbjct: 173 LVSYSQNAFVEGRQILDAVLVANEAIDSRK 202


>gb|ABN08564.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 977

 Score = 50.4 bits (119), Expect(2) = 1e-06
 Identities = 19/32 (59%), Positives = 26/32 (81%)
 Frame = -2

Query: 169 VCKLDFVKAFDSLSWSFLDYVLERIGFCLKWI 74
           + K+DF KA+DS+ WSFL+Y+L R+ FC KWI
Sbjct: 533 IFKVDFEKAYDSVDWSFLEYMLRRVDFCSKWI 564



 Score = 26.6 bits (57), Expect(2) = 1e-06
 Identities = 13/32 (40%), Positives = 21/32 (65%)
 Frame = -1

Query: 293 LFIPSIFSKFESSSVEGRRQNDEVLVENQLMD 198
           L + SI S  +S+ ++GR   D VLV N+++D
Sbjct: 491 LVMKSIISSSQSAFIKGRNLVDGVLVINEVVD 522


>emb|CAN81661.1| hypothetical protein VITISV_006044 [Vitis vinifera]
          Length = 816

 Score = 51.6 bits (122), Expect(2) = 1e-06
 Identities = 21/43 (48%), Positives = 31/43 (72%)
 Frame = -2

Query: 202 WTRRR*GNNGFVCKLDFVKAFDSLSWSFLDYVLERIGFCLKWI 74
           W ++  G+ G +CKLD  KA+DS++W FL  V+E+IGF  KW+
Sbjct: 284 WNKK--GDKGVICKLDIEKAYDSINWQFLLKVMEKIGFGAKWL 324



 Score = 25.4 bits (54), Expect(2) = 1e-06
 Identities = 12/18 (66%), Positives = 14/18 (77%)
 Frame = -3

Query: 354 SLLGGAYKIIAKNLIIRL 301
           SLLGG YK++AK L  RL
Sbjct: 232 SLLGGLYKLLAKVLANRL 249


>ref|XP_003530391.1| PREDICTED: uncharacterized protein LOC100804594 [Glycine max]
          Length = 4413

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 22/31 (70%), Positives = 29/31 (93%)
 Frame = -2

Query: 169  VCKLDFVKAFDSLSWSFLDYVLERIGFCLKW 77
            + K+DF KA+DS+SWSFLDY+L+R+GFCLKW
Sbjct: 1191 IFKVDFEKAYDSVSWSFLDYMLKRLGFCLKW 1221