BLASTX nr result

ID: Coptis21_contig00027678 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00027678
         (310 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275196.1| PREDICTED: uncharacterized protein LOC100256...   132   3e-29
ref|XP_003536908.1| PREDICTED: uncharacterized protein LOC100808...   123   2e-26
ref|XP_003520208.1| PREDICTED: uncharacterized protein LOC100785...   121   5e-26
ref|XP_002520749.1| conserved hypothetical protein [Ricinus comm...   119   3e-25
ref|XP_002307580.1| predicted protein [Populus trichocarpa] gi|2...   119   3e-25

>ref|XP_002275196.1| PREDICTED: uncharacterized protein LOC100256371 [Vitis vinifera]
           gi|296086702|emb|CBI32337.3| unnamed protein product
           [Vitis vinifera]
          Length = 926

 Score =  132 bits (332), Expect = 3e-29
 Identities = 67/103 (65%), Positives = 84/103 (81%)
 Frame = -1

Query: 310 GIVLLDGGNESGGKLYEAACLLKSVIRDRAYLIVAERVDIAAAVDASGVLLSDQGLPALV 131
           G+V+LDGG+ SGG+LYEAACLLKSV+R+RAYL+VAERVDIAAAV+A+GV+LSD+GLPA+V
Sbjct: 114 GVVVLDGGDGSGGRLYEAACLLKSVVRERAYLMVAERVDIAAAVNANGVVLSDKGLPAIV 173

Query: 130 ARNMMMESKSKSVVLPXXXXXXXXXXXXXXXXXSEGADFLIYG 2
           ARN MM+S+S+SV+LP                 SEGADFL+YG
Sbjct: 174 ARNTMMDSRSESVILPLVARNVQTANAAFTASNSEGADFLLYG 216


>ref|XP_003536908.1| PREDICTED: uncharacterized protein LOC100808213 [Glycine max]
          Length = 915

 Score =  123 bits (308), Expect = 2e-26
 Identities = 67/103 (65%), Positives = 76/103 (73%)
 Frame = -1

Query: 310 GIVLLDGGNESGGKLYEAACLLKSVIRDRAYLIVAERVDIAAAVDASGVLLSDQGLPALV 131
           GIV+L     SGGKLYEAAC LKS+++DRAYL+VAERVDIAAA  ASGVLLSDQGLP +V
Sbjct: 112 GIVVLASNQASGGKLYEAACSLKSLLQDRAYLLVAERVDIAAAAAASGVLLSDQGLPTVV 171

Query: 130 ARNMMMESKSKSVVLPXXXXXXXXXXXXXXXXXSEGADFLIYG 2
           ARNMM++SKS+ VVLP                 SEGADFLIYG
Sbjct: 172 ARNMMLDSKSELVVLPLVARIVRTVDAAVNASKSEGADFLIYG 214


>ref|XP_003520208.1| PREDICTED: uncharacterized protein LOC100785233 [Glycine max]
          Length = 914

 Score =  121 bits (304), Expect = 5e-26
 Identities = 67/103 (65%), Positives = 75/103 (72%)
 Frame = -1

Query: 310 GIVLLDGGNESGGKLYEAACLLKSVIRDRAYLIVAERVDIAAAVDASGVLLSDQGLPALV 131
           GIV+L     SGGKLYEAAC LKS+I+DRAYL+VAERVDIAAA  ASGVLLSDQGLP +V
Sbjct: 110 GIVVLASNEASGGKLYEAACSLKSLIQDRAYLLVAERVDIAAATAASGVLLSDQGLPTVV 169

Query: 130 ARNMMMESKSKSVVLPXXXXXXXXXXXXXXXXXSEGADFLIYG 2
           ARN M++SKS+ VVLP                 SEGADFLIYG
Sbjct: 170 ARNTMLDSKSELVVLPLVARIVQTVDAAVNASKSEGADFLIYG 212


>ref|XP_002520749.1| conserved hypothetical protein [Ricinus communis]
           gi|223540134|gb|EEF41711.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 921

 Score =  119 bits (297), Expect = 3e-25
 Identities = 61/102 (59%), Positives = 77/102 (75%)
 Frame = -1

Query: 310 GIVLLDGGNESGGKLYEAACLLKSVIRDRAYLIVAERVDIAAAVDASGVLLSDQGLPALV 131
           GIV+L+G + +G  LYEAACLLKSV++DR Y ++ ERVDIAAAV+ASGV+LSDQGLP++V
Sbjct: 108 GIVVLNGADVTGKTLYEAACLLKSVVKDRVYFLIGERVDIAAAVNASGVVLSDQGLPSIV 167

Query: 130 ARNMMMESKSKSVVLPXXXXXXXXXXXXXXXXXSEGADFLIY 5
           ARNMM +SKS+S++LP                 SEGADFLIY
Sbjct: 168 ARNMMRDSKSESILLPLVGRNVQSPTAALDASNSEGADFLIY 209


>ref|XP_002307580.1| predicted protein [Populus trichocarpa] gi|222857029|gb|EEE94576.1|
           predicted protein [Populus trichocarpa]
          Length = 604

 Score =  119 bits (297), Expect = 3e-25
 Identities = 66/105 (62%), Positives = 77/105 (73%), Gaps = 3/105 (2%)
 Frame = -1

Query: 310 GIVLLDG---GNESGGKLYEAACLLKSVIRDRAYLIVAERVDIAAAVDASGVLLSDQGLP 140
           GIV+L+G   G  SG  LYEAACL+ SV+RDRAYL++ ERVDIA AV+ASGV+LSDQGLP
Sbjct: 52  GIVILNGSIGGGGSGKSLYEAACLVNSVVRDRAYLLIGERVDIATAVNASGVVLSDQGLP 111

Query: 139 ALVARNMMMESKSKSVVLPXXXXXXXXXXXXXXXXXSEGADFLIY 5
           ALVARNMMM S+++SVVLP                 SEGADFLIY
Sbjct: 112 ALVARNMMMGSRTESVVLPLVARIVQTPNAALNASNSEGADFLIY 156


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