BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00027532
         (398 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272817.1| PREDICTED: U3 small nucleolar RNA-associated...    65   4e-09
ref|XP_004134769.1| PREDICTED: U3 small nucleolar RNA-associated...    61   6e-08
ref|XP_004173981.1| PREDICTED: U3 small nucleolar RNA-associated...    61   6e-08
ref|XP_002459212.1| hypothetical protein SORBIDRAFT_02g000660 [S...    60   2e-07
ref|XP_002310740.1| predicted protein [Populus trichocarpa] gi|2...    57   5e-07

>ref|XP_002272817.1| PREDICTED: U3 small nucleolar RNA-associated protein 6 homolog
           [Vitis vinifera] gi|302144122|emb|CBI23227.3| unnamed
           protein product [Vitis vinifera]
          Length = 652

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 33/67 (49%), Positives = 48/67 (71%), Gaps = 3/67 (4%)
 Frame = -3

Query: 396 SLYVLVGRLEEARTMAERLCD*KIAK---LWILRISIEMKWITSKSSSLAKDELPSTFEL 226
           SLY+ +G+L+EAR +AE+ C+ K +    LW+LR+S+EMK++T K  S +K +L S FEL
Sbjct: 425 SLYLQLGKLDEARKLAEKFCNGKFSGAVYLWLLRVSVEMKYVTRKCPSPSKADLLSIFEL 484

Query: 225 FRNALEK 205
            RN L K
Sbjct: 485 LRNILTK 491


>ref|XP_004134769.1| PREDICTED: U3 small nucleolar RNA-associated protein 6 homolog
           [Cucumis sativus]
          Length = 651

 Score = 60.8 bits (146), Expect(2) = 6e-08
 Identities = 31/65 (47%), Positives = 45/65 (69%), Gaps = 3/65 (4%)
 Frame = -3

Query: 390 YVLVGRLEEARTMAERLCD*KIA---KLWILRISIEMKWITSKSSSLAKDELPSTFELFR 220
           Y+ +GRL+EA+ +AERLC  K +   KLW+LR+S E+K +   S S +KD+L S FEL +
Sbjct: 426 YLELGRLDEAQKLAERLCSGKFSNSVKLWVLRVSTEIKCVLKDSPSPSKDDLKSIFELTK 485

Query: 219 NALEK 205
             L+K
Sbjct: 486 EVLKK 490



 Score = 20.8 bits (42), Expect(2) = 6e-08
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -1

Query: 209 KKVSVSEADNLW 174
           KK SVSE+ +LW
Sbjct: 489 KKFSVSESGSLW 500


>ref|XP_004173981.1| PREDICTED: U3 small nucleolar RNA-associated protein 6 homolog,
           partial [Cucumis sativus]
          Length = 351

 Score = 60.8 bits (146), Expect(2) = 6e-08
 Identities = 31/65 (47%), Positives = 45/65 (69%), Gaps = 3/65 (4%)
 Frame = -3

Query: 390 YVLVGRLEEARTMAERLCD*KIA---KLWILRISIEMKWITSKSSSLAKDELPSTFELFR 220
           Y+ +GRL+EA+ +AERLC  K +   KLW+LR+S E+K +   S S +KD+L S FEL +
Sbjct: 156 YLELGRLDEAQKLAERLCSGKFSNSVKLWVLRVSTEIKCVLKDSPSPSKDDLKSIFELTK 215

Query: 219 NALEK 205
             L+K
Sbjct: 216 EVLKK 220



 Score = 20.8 bits (42), Expect(2) = 6e-08
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -1

Query: 209 KKVSVSEADNLW 174
           KK SVSE+ +LW
Sbjct: 219 KKFSVSESGSLW 230


>ref|XP_002459212.1| hypothetical protein SORBIDRAFT_02g000660 [Sorghum bicolor]
           gi|241922589|gb|EER95733.1| hypothetical protein
           SORBIDRAFT_02g000660 [Sorghum bicolor]
          Length = 682

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 35/69 (50%), Positives = 47/69 (68%), Gaps = 5/69 (7%)
 Frame = -3

Query: 396 SLYVLVGRLEEARTMAERLCD*KI---AKLWILRISIEMKWITSK--SSSLAKDELPSTF 232
           SLY+ + RLEEA+T+AE+LCD  +   AKLW LR S+E+  I +   SSSL+K+ L S F
Sbjct: 454 SLYLKLERLEEAKTLAEKLCDGPLSNAAKLWSLRASMEINSIATAPGSSSLSKENLSSLF 513

Query: 231 ELFRNALEK 205
           +LF   L K
Sbjct: 514 DLFSTVLSK 522


>ref|XP_002310740.1| predicted protein [Populus trichocarpa] gi|222853643|gb|EEE91190.1|
           predicted protein [Populus trichocarpa]
          Length = 643

 Score = 57.0 bits (136), Expect(2) = 5e-07
 Identities = 30/67 (44%), Positives = 44/67 (65%), Gaps = 3/67 (4%)
 Frame = -3

Query: 396 SLYVLVGRLEEARTMAERLCD*KIA---KLWILRISIEMKWITSKSSSLAKDELPSTFEL 226
           S Y+ +GR +EAR +A+RLC  K++   KLWILR S+E+K  T  +S+ +KD+      L
Sbjct: 415 SFYLQLGRFDEARKLADRLCSGKLSDSEKLWILRASMEIKSFTDDTSAPSKDDFQYVLGL 474

Query: 225 FRNALEK 205
            R+AL K
Sbjct: 475 LRSALTK 481



 Score = 21.6 bits (44), Expect(2) = 5e-07
 Identities = 7/11 (63%), Positives = 11/11 (100%)
 Frame = -1

Query: 206 KVSVSEADNLW 174
           KVS+S+A++LW
Sbjct: 481 KVSISQAEDLW 491