BLASTX nr result

ID: Coptis21_contig00027388 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00027388
         (561 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN64638.1| hypothetical protein VITISV_033929 [Vitis vinifera]    78   1e-12

>emb|CAN64638.1| hypothetical protein VITISV_033929 [Vitis vinifera]
          Length = 865

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 53/176 (30%), Positives = 83/176 (47%), Gaps = 2/176 (1%)
 Frame = -2

Query: 530 MNFSEEWKSLWTINSVYSPPLLITRPSSKQLGPLLFTPSPKPQTKXXXXXXXXXXXXXXX 351
           M+FSEEWKS+W I+SV++PPLLI+  S   LGPL F PSP   T                
Sbjct: 1   MDFSEEWKSIWPISSVFTPPLLIS--SKPSLGPLFFNPSPNTLT--------------PL 44

Query: 350 XXXXXXXXXXXXXXXXXXSNNLQLLKCSKTDFLLFFPTGGDLNRVGFVKMVWNGSKFDI- 174
                              + L LL+C     L  FPTG + +++GF+ +    S  D+ 
Sbjct: 45  FSKPSFSFPPHLPRSSLLHDRLHLLRCPNAAVLALFPTGVNSDQIGFLLLSVKDSCLDVR 104

Query: 173 SDSDDDLMTTEHEFDDGLCQISVSAVAVDDFEAIGN-FVIGYLLACCLDTVHLYRV 9
           +D + D+  ++   +  + QI  + +    +   GN   +G +LAC + +VH + V
Sbjct: 105 ADRNGDVFVSKKRLNHRIVQILATPIG---YSFSGNPDSVGLVLACTMYSVHWFSV 157


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