BLASTX nr result

ID: Coptis21_contig00027362 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00027362
         (368 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283812.1| PREDICTED: uncharacterized protein LOC100245...   170   1e-40
ref|XP_002510322.1| conserved hypothetical protein [Ricinus comm...   160   8e-38
ref|XP_002327084.1| predicted protein [Populus trichocarpa] gi|2...   157   1e-36
ref|XP_002891435.1| hypothetical protein ARALYDRAFT_473986 [Arab...   148   4e-34
ref|NP_175279.1| uncharacterized protein [Arabidopsis thaliana] ...   147   1e-33

>ref|XP_002283812.1| PREDICTED: uncharacterized protein LOC100245429 [Vitis vinifera]
           gi|302142414|emb|CBI19617.3| unnamed protein product
           [Vitis vinifera]
          Length = 355

 Score =  170 bits (430), Expect = 1e-40
 Identities = 78/109 (71%), Positives = 92/109 (84%)
 Frame = -1

Query: 368 GKSSLVWVLAPIAFISSLILPQFFLTNAIDSLITDEILAEIVASFSSETMFYFGLAAFLL 189
           G  S +WVLAP+A ISSL+LPQFFL +AI++++ DE+LAEIVA+  SE MFY GLA FL 
Sbjct: 131 GTGSFLWVLAPVALISSLVLPQFFLDSAIEAILKDEVLAEIVATIFSEAMFYIGLATFLH 190

Query: 188 VADHVQRPYLQFTPKRWGLITGLNGYLSSAFFTMGFKVMAPLFAVYATW 42
           V DHVQRPYLQF+PKRWGLITGL GYL++AFFTMGFK+ AP FAVY TW
Sbjct: 191 VTDHVQRPYLQFSPKRWGLITGLKGYLTTAFFTMGFKIFAPFFAVYVTW 239


>ref|XP_002510322.1| conserved hypothetical protein [Ricinus communis]
           gi|223551023|gb|EEF52509.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 339

 Score =  160 bits (406), Expect = 8e-38
 Identities = 74/106 (69%), Positives = 88/106 (83%)
 Frame = -1

Query: 359 SLVWVLAPIAFISSLILPQFFLTNAIDSLITDEILAEIVASFSSETMFYFGLAAFLLVAD 180
           S +W+L P A I+SL +PQFF++N I++ + DEIL EIVAS SSE MFY GL+ FLLV D
Sbjct: 118 SFLWILGPAALIASLFIPQFFISNVIEAFLKDEILVEIVASLSSEAMFYIGLSIFLLVTD 177

Query: 179 HVQRPYLQFTPKRWGLITGLNGYLSSAFFTMGFKVMAPLFAVYATW 42
            VQRP+LQF+PKRWGLITGL GYL+SAFF MGFKV+APLF VYATW
Sbjct: 178 RVQRPFLQFSPKRWGLITGLKGYLTSAFFIMGFKVIAPLFIVYATW 223


>ref|XP_002327084.1| predicted protein [Populus trichocarpa] gi|222835399|gb|EEE73834.1|
           predicted protein [Populus trichocarpa]
          Length = 322

 Score =  157 bits (396), Expect = 1e-36
 Identities = 72/108 (66%), Positives = 86/108 (79%)
 Frame = -1

Query: 365 KSSLVWVLAPIAFISSLILPQFFLTNAIDSLITDEILAEIVASFSSETMFYFGLAAFLLV 186
           K S VW+L P+A + SLI+PQFFL +AI++ + DE+L EI  S S E MFYFGLA FL V
Sbjct: 138 KGSFVWLLGPVALVLSLIVPQFFLGSAIEAFLKDEVLVEIATSLSFEAMFYFGLATFLTV 197

Query: 185 ADHVQRPYLQFTPKRWGLITGLNGYLSSAFFTMGFKVMAPLFAVYATW 42
            D +QRPYLQF+ KRWGLITGL GYL+SAFF MGFKV+APLFAV+ TW
Sbjct: 198 TDRIQRPYLQFSSKRWGLITGLRGYLTSAFFVMGFKVIAPLFAVFVTW 245


>ref|XP_002891435.1| hypothetical protein ARALYDRAFT_473986 [Arabidopsis lyrata subsp.
           lyrata] gi|297337277|gb|EFH67694.1| hypothetical protein
           ARALYDRAFT_473986 [Arabidopsis lyrata subsp. lyrata]
          Length = 331

 Score =  148 bits (374), Expect = 4e-34
 Identities = 71/108 (65%), Positives = 84/108 (77%)
 Frame = -1

Query: 365 KSSLVWVLAPIAFISSLILPQFFLTNAIDSLITDEILAEIVASFSSETMFYFGLAAFLLV 186
           K S +WVLAP+  ISSLILPQFFL+ AI++   ++ +AEIV SF  ET+FY GLA FL V
Sbjct: 108 KGSFLWVLAPVVLISSLILPQFFLSGAIEASFKNDTVAEIVTSFCFETVFYAGLAIFLSV 167

Query: 185 ADHVQRPYLQFTPKRWGLITGLNGYLSSAFFTMGFKVMAPLFAVYATW 42
            D VQRPYL F+ KRWGLITGL GYL+SAF TMG KV+ P+FAVY TW
Sbjct: 168 TDRVQRPYLDFSSKRWGLITGLRGYLTSAFLTMGLKVVVPVFAVYMTW 215


>ref|NP_175279.1| uncharacterized protein [Arabidopsis thaliana]
           gi|56381889|gb|AAV85663.1| At1g48460 [Arabidopsis
           thaliana] gi|57222220|gb|AAW39017.1| At1g48460
           [Arabidopsis thaliana] gi|332194175|gb|AEE32296.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 340

 Score =  147 bits (370), Expect = 1e-33
 Identities = 70/108 (64%), Positives = 83/108 (76%)
 Frame = -1

Query: 365 KSSLVWVLAPIAFISSLILPQFFLTNAIDSLITDEILAEIVASFSSETMFYFGLAAFLLV 186
           K S +WVLAP+  ISSLILPQFFL+  I++   ++ +AEIV SF  ET+FY GLA FL V
Sbjct: 117 KGSFLWVLAPVVLISSLILPQFFLSGIIEATFKNDTVAEIVTSFCFETVFYAGLAIFLSV 176

Query: 185 ADHVQRPYLQFTPKRWGLITGLNGYLSSAFFTMGFKVMAPLFAVYATW 42
            D VQRPYL F+ KRWGLITGL GYL+SAF TMG KV+ P+FAVY TW
Sbjct: 177 TDRVQRPYLDFSSKRWGLITGLRGYLTSAFLTMGLKVVVPVFAVYMTW 224


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