BLASTX nr result

ID: Coptis21_contig00026996 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00026996
         (397 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|2...    77   1e-12
ref|XP_002313562.1| predicted protein [Populus trichocarpa] gi|2...    77   1e-12
ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|2...    77   2e-12
ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|2...    76   2e-12
ref|XP_002865536.1| hypothetical protein ARALYDRAFT_917542 [Arab...    70   1e-10

>ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|222870351|gb|EEF07482.1|
            predicted protein [Populus trichocarpa]
          Length = 1046

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 44/129 (34%), Positives = 65/129 (50%), Gaps = 13/129 (10%)
 Frame = -3

Query: 380  HFPLS------LLYDSTCNLNSTVAKLIENGSWSIP------WHIRVH-IPDIVTEMEEE 240
            H PL+       +YDS    N+ V  LI+N  W  P      WH  +  IP         
Sbjct: 784  HSPLADSYGERFIYDSGMAKNAKVNVLIQNSEWKTPTTQAIGWHPIIEAIPS-----NSN 838

Query: 239  VKVGRGEDRIIWNASQKGEFTIKDTYESVRETKRPITWHSIIWFPNRIPRHSFVAWLTLS 60
             K+G+ +D IIW  S    F++K  +E +R  ++ + WH I+WF N +PRHSF+ W+ + 
Sbjct: 839  PKMGQ-KDEIIWLDSPNHRFSVKVAWEQLRRHRQLVEWHDIVWFKNAVPRHSFLLWMVVQ 897

Query: 59   EGLKPLDKL 33
            + L   DKL
Sbjct: 898  QKLTTQDKL 906


>ref|XP_002313562.1| predicted protein [Populus trichocarpa] gi|222849970|gb|EEE87517.1|
           predicted protein [Populus trichocarpa]
          Length = 331

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 43/129 (33%), Positives = 64/129 (49%), Gaps = 13/129 (10%)
 Frame = -3

Query: 380 HFPLS------LLYDSTCNLNSTVAKLIENGSWSIP------WHIRVH-IPDIVTEMEEE 240
           H PL+       +YDS    N+ V  LI+N  W  P      WH  +  IP         
Sbjct: 69  HSPLADSYGERFIYDSGMAKNAKVNVLIQNSEWKTPTTQAIGWHPIIEAIPS-----NSN 123

Query: 239 VKVGRGEDRIIWNASQKGEFTIKDTYESVRETKRPITWHSIIWFPNRIPRHSFVAWLTLS 60
            K+G+ +D I+W  S    F++K  +E +R  +  + WH I+WF N +PRHSF+ W+ + 
Sbjct: 124 PKMGQ-KDEIVWLDSPNHRFSVKVAWEQLRRHRHMVEWHDIVWFKNAVPRHSFLLWMVVQ 182

Query: 59  EGLKPLDKL 33
           + L   DKL
Sbjct: 183 QKLTTQDKL 191


>ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|222873039|gb|EEF10170.1|
           predicted protein [Populus trichocarpa]
          Length = 517

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 42/129 (32%), Positives = 65/129 (50%), Gaps = 13/129 (10%)
 Frame = -3

Query: 380 HFPLS------LLYDSTCNLNSTVAKLIENGSWSIP------WHIRVH-IPDIVTEMEEE 240
           H PL+       +YDS    N+ V  LI+N  W  P      WH  +  IP         
Sbjct: 251 HSPLADSYGERFIYDSGMAKNAKVNVLIQNSEWKTPTTQAIGWHPIIEAIPS-----NSN 305

Query: 239 VKVGRGEDRIIWNASQKGEFTIKDTYESVRETKRPITWHSIIWFPNRIPRHSFVAWLTLS 60
            K+G+ +D ++W  S    F++K  +E +R  ++ + WH I+WF N +PRHSF+ W+ + 
Sbjct: 306 PKMGQ-KDELVWLDSPNHRFSVKVAWEQLRRHRQMVEWHDIVWFKNAVPRHSFLLWMAVQ 364

Query: 59  EGLKPLDKL 33
           + L   DKL
Sbjct: 365 QKLTTQDKL 373


>ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|222874875|gb|EEF12006.1|
            predicted protein [Populus trichocarpa]
          Length = 1386

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 43/129 (33%), Positives = 64/129 (49%), Gaps = 13/129 (10%)
 Frame = -3

Query: 380  HFPLS------LLYDSTCNLNSTVAKLIENGSWSIP------WHIRVH-IPDIVTEMEEE 240
            H PL+       +YDS    N+ V  LI+N  W  P      WH  +  IP         
Sbjct: 1124 HSPLADSYGERFIYDSGMAKNAKVNVLIQNSEWKTPTTQAIGWHPIIEAIPS-----NSN 1178

Query: 239  VKVGRGEDRIIWNASQKGEFTIKDTYESVRETKRPITWHSIIWFPNRIPRHSFVAWLTLS 60
             K+G+ +D I+W  S    F +K  +E +R  ++ + WH I+WF N +PRHSF+ W+ + 
Sbjct: 1179 PKMGQ-KDEIVWLDSPNHRFLVKVAWEHLRRHRQMVEWHDIVWFKNAVPRHSFLLWMAVQ 1237

Query: 59   EGLKPLDKL 33
            + L   DKL
Sbjct: 1238 QKLTTQDKL 1246


>ref|XP_002865536.1| hypothetical protein ARALYDRAFT_917542 [Arabidopsis lyrata subsp.
           lyrata] gi|297311371|gb|EFH41795.1| hypothetical protein
           ARALYDRAFT_917542 [Arabidopsis lyrata subsp. lyrata]
          Length = 227

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 32/114 (28%), Positives = 60/114 (52%), Gaps = 5/114 (4%)
 Frame = -3

Query: 338 NSTVAKLIENGSWSIPWHIRVHIPDIVTEMEEEVKVGR--GEDRIIWNAS---QKGEFTI 174
           +STVA  ++   W +       + ++VT+++E     R  G D+ +W  +       FT 
Sbjct: 6   HSTVANAVQGTQWRVRRCRSQTLRNVVTKLQEIAPPQRAKGPDKPLWRYTLDDYDSSFTS 65

Query: 173 KDTYESVRETKRPITWHSIIWFPNRIPRHSFVAWLTLSEGLKPLDKLKEWNTVQ 12
           + T+  +R+ K  + WH+ +WFP R+PR+SF+ WL + + L    +++ W   Q
Sbjct: 66  RHTWNLLRKAKHKVLWHNSVWFPQRVPRYSFIVWLAVKDQLSTGTRMRAWGVEQ 119


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