BLASTX nr result

ID: Coptis21_contig00026967 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00026967
         (991 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN81672.1| hypothetical protein VITISV_000588 [Vitis vinifera]    91   3e-16
ref|XP_002267999.2| PREDICTED: uncharacterized protein LOC100243...    83   1e-13
ref|XP_002520402.1| conserved hypothetical protein [Ricinus comm...    76   1e-11
ref|XP_003529783.1| PREDICTED: serine/threonine-protein phosphat...    71   3e-10
ref|XP_002530585.1| nascent polypeptide associated complex alpha...    69   2e-09

>emb|CAN81672.1| hypothetical protein VITISV_000588 [Vitis vinifera]
          Length = 689

 Score = 91.3 bits (225), Expect = 3e-16
 Identities = 80/304 (26%), Positives = 131/304 (43%), Gaps = 4/304 (1%)
 Frame = +3

Query: 3   PQGELGFTPLDFSMISGLAIGLGEPLRCSTAFQSCQKMIEFFPCLTAESYDSSGVRISGI 182
           P GE+G TP DFS+I+GL IG G+P+  +      +  +               ++  G 
Sbjct: 119 PFGEVGMTPYDFSVITGLRIG-GKPIPYNAGVHRSEDDL---------------LKALGS 162

Query: 183 KAAYITPLTTADGLQFLIDYLSLDSDHGQAHVDEYVRAFCMYLMGVFFFPSGHSTINLGY 362
           +   I    +   L      +  ++D  +   + + RAF +YL G   F +    +NL  
Sbjct: 163 RPPVIRGSVSCSWLFENFHNVVCNTDRDR---ECHTRAFILYLFGCTMFGTLDCKVNLNS 219

Query: 363 LANFEHLAELGGIDFGGAIYCHLLRCLDRASRQTGGVSSPQMGGFVILLEVWFYEYFRAA 542
           L   E +  +G  D+GGA Y  L   ++  SR      + ++GG   + E+W YEYF   
Sbjct: 220 LPALEDVDRIGEYDWGGAAYAALCTHMNSVSRG----KAHRLGGLWKVWEIWSYEYFSLL 275

Query: 543 NPIL-TEYTDERPR-LRVWHGSRRARLTSEISHNITSVRTQIELSTESSIVWRPWRTSVH 716
            P L  + +   PR LR W GS           ++ + R  I   T   + W PW     
Sbjct: 276 APSLKVDDSMAFPRSLRWWGGSEFEMCPKHRMVDLKNFREAINNLTIEMVNWNPWGEIEP 335

Query: 717 LDMNDCRYALFISHRRMVFTCGSDMEWYLGDRCYRQL--TPCFGIPPDPPIHVSEAKDMT 890
               + R+A  +S RR++F   S   W+LG+R   Q   +P   +P  PP+ +      +
Sbjct: 336 TLPPEIRHAKELSRRRILFEGPSGQFWFLGERLSMQTLGSPQPMVPLPPPMSMRLTASFS 395

Query: 891 IEQV 902
            E++
Sbjct: 396 AEEL 399


>ref|XP_002267999.2| PREDICTED: uncharacterized protein LOC100243242 [Vitis vinifera]
          Length = 532

 Score = 82.8 bits (203), Expect = 1e-13
 Identities = 76/297 (25%), Positives = 126/297 (42%), Gaps = 4/297 (1%)
 Frame = +3

Query: 24  TPLDFSMISGLAIGLGEPLRCSTAFQSCQKMIEFFPCLTAESYDSSGVRISGIKAAYITP 203
           TP DFS+I+GL IG G+P+  +      +  +               ++  G +   I  
Sbjct: 2   TPYDFSVITGLRIG-GKPIPYNAGVHRSEDDL---------------LKALGSRPPVIRG 45

Query: 204 LTTADGLQFLIDYLSLDSDHGQAHVDEYVRAFCMYLMGVFFFPSGHSTINLGYLANFEHL 383
             +   L      +  ++D  +   + + RAF +YL G   F +    +NL  L   E +
Sbjct: 46  SVSCSWLFENFHNVVCNTDRDR---ECHTRAFILYLFGCTMFGTLDCKVNLNSLPALEDV 102

Query: 384 AELGGIDFGGAIYCHLLRCLDRASRQTGGVSSPQMGGFVILLEVWFYEYFRAANPIL-TE 560
             +G  D+GGA Y  L   ++  SR      + ++GG   + E+W YEYF    P L  +
Sbjct: 103 DRIGEYDWGGAAYAALCTHMNSVSRG----KAHRLGGLWKVWEIWSYEYFSLLAPSLKVD 158

Query: 561 YTDERPR-LRVWHGSRRARLTSEISHNITSVRTQIELSTESSIVWRPWRTSVHLDMNDCR 737
            +   PR LR W GS           ++ + R  I   T   + W PW         + R
Sbjct: 159 DSMAFPRSLRWWGGSEFEMCPKHRMVDLKNFREAINNLTIEMVNWNPWGEIEPTLPPEIR 218

Query: 738 YALFISHRRMVFTCGSDMEWYLGDRCYRQL--TPCFGIPPDPPIHVSEAKDMTIEQV 902
           +A  +S RR++F   S   W+LG+R   Q   +P   +P  PP+ +      + E++
Sbjct: 219 HAKELSRRRILFEGPSGQFWFLGERLSMQTLGSPQPMVPLPPPMSMRLTASFSAEEL 275


>ref|XP_002520402.1| conserved hypothetical protein [Ricinus communis]
           gi|223540449|gb|EEF42018.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 837

 Score = 75.9 bits (185), Expect = 1e-11
 Identities = 73/287 (25%), Positives = 120/287 (41%), Gaps = 5/287 (1%)
 Frame = +3

Query: 9   GELGFTPLDFSMISGLAIGLGEPLRCSTAFQSCQKMIEFFPCLTAESYDSSGVRISGIKA 188
           GE+  T  D +++ GLAI  GEP+     + SC+ + E F     ++   SG  +     
Sbjct: 116 GEMTITLEDVALLLGLAID-GEPV-LGVTYTSCKPICEKFLGKVPDAGYMSGGMVK---- 169

Query: 189 AYITPLTTADGLQFLIDYLS-LDSDHGQAHVDEYVRAFCMYLMG-VFFFPSGHSTINLGY 362
                      L +L +Y S    D     ++ + RA+ +YL+G   F  +  + + + Y
Sbjct: 170 -----------LSWLKEYFSQCPEDAPLEEIERHTRAYLLYLVGSTIFSTTTGNKVPIMY 218

Query: 363 LANFEHLAELGGIDFGGAIYCHLLRCLDRASRQTGGVSSPQMGGFVILLEVWFYEYFRAA 542
           L  FE   + G   +G A    L R L RA+ +    S   + G + LL+ W Y +   A
Sbjct: 219 LPLFEDFEKAGNYAWGAAALAFLYRALGRATLK----SQSTISGCLTLLQCWSYFHLNIA 274

Query: 543 NPILTE--YTDERPRLRVWHGSRRARLTSEISHNITSVRTQIELSTESSIVWRPWRT-SV 713
            P   +    D  P +  W G + A   + +  +I   R  ++    S + W P+     
Sbjct: 275 QPKFYQDPVRDCFPFVHWWKGKQSA---ATVKRDIVFYRKALDSLNPSDVEWLPYNNIDS 331

Query: 714 HLDMNDCRYALFISHRRMVFTCGSDMEWYLGDRCYRQLTPCFGIPPD 854
            L   + R +L +   + +  C    E +L DRC RQ     GIP D
Sbjct: 332 TLIPENVRSSLILGRSKTMLICFDKAERHLPDRCLRQHGMHQGIPKD 378


>ref|XP_003529783.1| PREDICTED: serine/threonine-protein phosphatase 7 long form homolog
           [Glycine max]
          Length = 497

 Score = 71.2 bits (173), Expect = 3e-10
 Identities = 72/293 (24%), Positives = 115/293 (39%), Gaps = 11/293 (3%)
 Frame = +3

Query: 9   GELGFTPLDFSMISGLAIGLGEPL--RCSTAFQSCQKMIEFFPCLTAESYDSSGVRISGI 182
           GEL  T  D S++ GLAI  GEP+    S     C+K++   P    E  +   V+++ +
Sbjct: 97  GELTITLEDVSLLLGLAID-GEPVIGPISAPSSGCEKLLGRVP----EDLNGGMVKLTWL 151

Query: 183 KAAYITPLTTADGLQFLIDYLSLDSDHGQAHVDEYVRAFCMYLMG-VFFFPSGHSTINLG 359
           K  +                     D  Q  ++   RA+ +YL+G   F  +  + + + 
Sbjct: 152 KEFFS----------------ECPEDASQEEIERCTRAYLLYLVGSTIFSTTTGNKVPVM 195

Query: 360 YLANFEHLAELGGIDFGGAIYCHLLRCLDRASRQTGGVSSPQMGGFVILLEVWFYEYFRA 539
           YL+ FE   + G   +G      L R L  AS +    S   + G + L++ W Y     
Sbjct: 196 YLSLFEDFDKAGKFAWGAGALAFLYRALGNASLK----SQSTISGCLTLVQCWCYSRLNV 251

Query: 540 ANPILTEYTDER--PRLRVWHGSRRARLTSEISHNITSVRTQIELSTESSIVWRPWRTSV 713
             P   +  D    P +  W G   AR       N+ S R  ++      + W P++   
Sbjct: 252 GLPKFNQEPDNNCFPFVLKWKGKSGARTKC----NVVSYRKALDSLNPCDVQWLPYK--- 304

Query: 714 HLDMN------DCRYALFISHRRMVFTCGSDMEWYLGDRCYRQLTPCFGIPPD 854
             DM+      D + +L +   R +  C    E +L DRC RQ      IP D
Sbjct: 305 --DMDCTAIPEDIKASLILRASRTMLLCFDKAERHLPDRCLRQFAMHQTIPKD 355


>ref|XP_002530585.1| nascent polypeptide associated complex alpha subunit, putative
            [Ricinus communis] gi|223529884|gb|EEF31815.1| nascent
            polypeptide associated complex alpha subunit, putative
            [Ricinus communis]
          Length = 687

 Score = 68.6 bits (166), Expect = 2e-09
 Identities = 68/284 (23%), Positives = 116/284 (40%), Gaps = 1/284 (0%)
 Frame = +3

Query: 12   ELGFTPLDFSMISGLAIGLGEPLRCSTAF-QSCQKMIEFFPCLTAESYDSSGVRISGIKA 188
            E+G TPL ++MI+G+  G G+PL       + C K++       +E + S G     +K 
Sbjct: 286  EIGPTPLAWTMITGITFG-GDPLNPPDITPEECIKLLGLVGT-ESEGFFSQGK----LKL 339

Query: 189  AYITPLTTADGLQFLIDYLSLDSDHGQAHVDEYVRAFCMYLMGVFFFPSGHSTINLGYLA 368
              + PLT           L        + ++   R   +YL+G  FF      I +  ++
Sbjct: 340  DVLCPLT-----------LDFRKKPANSDLEWMFRRLILYLVGSCFFSGPDMMIPIRLVS 388

Query: 369  NFEHLAELGGIDFGGAIYCHLLRCLDRASRQTGGVSSPQMGGFVILLEVWFYEYFRAANP 548
               ++ ++   D+G A +   LR +   + +  G  S    GF   L +W YE+     P
Sbjct: 389  AMSNIQKISQYDWGAATFSAFLRGMRHKTSECRGTFS----GFYPFLLLWAYEHIPYQRP 444

Query: 549  ILTEYTDERPRLRVWHGSRRARLTSEISHNITSVRTQIELSTESSIVWRPWRTSVHLDMN 728
            +     D  PR R W      ++    S++ T  R ++E   E  + + P+      +  
Sbjct: 445  LTNFDPDIFPRARQWD---LTKMDVPNSNDFTWYRLELEYLEEDEVNFDPY--GKLWEEE 499

Query: 729  DCRYALFISHRRMVFTCGSDMEWYLGDRCYRQLTPCFGIPPDPP 860
               Y   +S +R+ F      E Y+G+R  RQ      IP  PP
Sbjct: 500  GLEYERELSQKRIAFLGLESWELYMGERNLRQFGGGVRIPHSPP 543


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