BLASTX nr result

ID: Coptis21_contig00026939 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00026939
         (436 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003548069.1| PREDICTED: tuftelin-interacting protein 11-l...    85   7e-15
ref|XP_002265002.1| PREDICTED: tuftelin-interacting protein 11-l...    80   2e-13
ref|XP_002524028.1| tuftelin interacting protein, putative [Rici...    79   3e-13
ref|XP_002319771.1| predicted protein [Populus trichocarpa] gi|2...    75   5e-12
emb|CBI26422.3| unnamed protein product [Vitis vinifera]               75   7e-12

>ref|XP_003548069.1| PREDICTED: tuftelin-interacting protein 11-like [Glycine max]
          Length = 862

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 52/112 (46%), Positives = 56/112 (50%)
 Frame = -2

Query: 411 MDEYQHMENFGMENDYEEGQWIGGEXXXXXXXXXXXXXXXXXDVLFGVFADVTXXXXXXX 232
           MDE Q ME FGMENDYE GQWIGGE                  VL+GVFAD         
Sbjct: 1   MDEDQEMERFGMENDYEGGQWIGGEFYYKNRKEKRTQTKDD--VLYGVFADSDDNDDDDY 58

Query: 231 XXXXXXXXXXXXXKYDLTKPVNFVSTGTVMPNQEIDRNIETSQKEDGDVQVD 76
                          DLTKPVNFVSTGT MPNQEID   +   ++DG V  D
Sbjct: 59  PSRKRRKDFSKKP--DLTKPVNFVSTGTFMPNQEIDNKSKEQDEKDGYVSED 108


>ref|XP_002265002.1| PREDICTED: tuftelin-interacting protein 11-like [Vitis vinifera]
          Length = 852

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 49/106 (46%), Positives = 55/106 (51%)
 Frame = -2

Query: 411 MDEYQHMENFGMENDYEEGQWIGGEXXXXXXXXXXXXXXXXXDVLFGVFADVTXXXXXXX 232
           MDEYQ ME+FGM+ND+E+GQWI GE                 DVL+GVFAD         
Sbjct: 1   MDEYQEMESFGMDNDFEDGQWINGE--FYYRKRRDKRHQTKDDVLYGVFAD----SDSDD 54

Query: 231 XXXXXXXXXXXXXKYDLTKPVNFVSTGTVMPNQEIDRNIETSQKED 94
                        K D TKPVNFVSTG VMP QEI+RN      ED
Sbjct: 55  SSSAKKRRKDLSNKTDFTKPVNFVSTGVVMPTQEIERNSREQVNED 100


>ref|XP_002524028.1| tuftelin interacting protein, putative [Ricinus communis]
           gi|223536755|gb|EEF38396.1| tuftelin interacting
           protein, putative [Ricinus communis]
          Length = 883

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 52/110 (47%), Positives = 58/110 (52%), Gaps = 4/110 (3%)
 Frame = -2

Query: 411 MDEYQHMENFGMENDYEEGQWIGGEXXXXXXXXXXXXXXXXXDVLFGVFADV--TXXXXX 238
           MD+YQ ME FGMEND+E+GQWI GE                 DVL+GVFAD   +     
Sbjct: 1   MDDYQEMERFGMENDFEDGQWINGE--FYYKNRKEKRKQTKDDVLYGVFADYSDSDDDYD 58

Query: 237 XXXXXXXXXXXXXXXKYDLTKPVNFVSTGTVMPNQEID--RNIETSQKED 94
                          K DLTKPVNFVSTG VMPNQEID   N   S KE+
Sbjct: 59  GGSSRKRKKDRDFGRKADLTKPVNFVSTGKVMPNQEIDISNNNNDSLKEE 108


>ref|XP_002319771.1| predicted protein [Populus trichocarpa] gi|222858147|gb|EEE95694.1|
           predicted protein [Populus trichocarpa]
          Length = 845

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 45/106 (42%), Positives = 55/106 (51%), Gaps = 1/106 (0%)
 Frame = -2

Query: 411 MDEYQH-MENFGMENDYEEGQWIGGEXXXXXXXXXXXXXXXXXDVLFGVFADVTXXXXXX 235
           MD+YQ  ME FGMEND+E+G++I GE                  VL+G+FAD        
Sbjct: 1   MDDYQEEMERFGMENDFEDGRYINGEFYFKKQKEKRKQSKDD--VLYGIFADYDSDDDYV 58

Query: 234 XXXXXXXXXXXXXXKYDLTKPVNFVSTGTVMPNQEIDRNIETSQKE 97
                           DLTKPVNFVSTGTVMPNQEID+N+     +
Sbjct: 59  SSSRKRRKDSRKA---DLTKPVNFVSTGTVMPNQEIDKNLRDKNSD 101


>emb|CBI26422.3| unnamed protein product [Vitis vinifera]
          Length = 739

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 48/107 (44%), Positives = 56/107 (52%)
 Frame = -2

Query: 411 MDEYQHMENFGMENDYEEGQWIGGEXXXXXXXXXXXXXXXXXDVLFGVFADVTXXXXXXX 232
           MDEYQ ME+FGM+ND+E+GQWI GE                 DVL+GVFAD         
Sbjct: 1   MDEYQEMESFGMDNDFEDGQWINGE--FYYRKRRDKRHQTKDDVLYGVFAD----SDSDD 54

Query: 231 XXXXXXXXXXXXXKYDLTKPVNFVSTGTVMPNQEIDRNIETSQKEDG 91
                        K D TKPVNFVSTG VMP QEI+ + E    +DG
Sbjct: 55  SSSAKKRRKDLSNKTDFTKPVNFVSTGVVMPTQEIELD-EHDNDDDG 100


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