BLASTX nr result

ID: Coptis21_contig00026900 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00026900
         (497 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277958.2| PREDICTED: thyroid adenoma-associated protei...   254   5e-66
emb|CAN72934.1| hypothetical protein VITISV_020616 [Vitis vinifera]   252   2e-65
ref|XP_002305983.1| predicted protein [Populus trichocarpa] gi|2...   231   6e-59
ref|XP_002517489.1| conserved hypothetical protein [Ricinus comm...   227   7e-58
ref|XP_004163531.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   222   3e-56

>ref|XP_002277958.2| PREDICTED: thyroid adenoma-associated protein homolog [Vitis
            vinifera]
          Length = 2223

 Score =  254 bits (649), Expect = 5e-66
 Identities = 126/166 (75%), Positives = 140/166 (84%), Gaps = 1/166 (0%)
 Frame = -1

Query: 497  LELSLLKEAVPLNMRCSSTAFQMKWTSLFRKFFSRVRTALERQFKQGSWKPLISSKNDEV 318
            LELSLLKEAVPLNMR  STAFQMKW SLFRKFF+RVRTALERQFKQGSW+P+     + V
Sbjct: 718  LELSLLKEAVPLNMRSCSTAFQMKWASLFRKFFARVRTALERQFKQGSWQPISHCNKNGV 777

Query: 317  DFDKKTKGTVALRAEDLFQFMRWFSSFLFFSCYPSAPYERKIMAMELILILINVWPVIPP 138
               K T+  V  RAEDLF FM+W SSFLFFSCYPSAPYERKIMAMELILI++NVW VIPP
Sbjct: 778  FPYKGTEEAVVSRAEDLFHFMKWLSSFLFFSCYPSAPYERKIMAMELILIMLNVWTVIPP 837

Query: 137  SQSN-GISTPASCLYPYNEGFTLPDSTLLLVGSIVDSWDRLRQSSF 3
            SQ   G  +P SC+YPYN+GFTLPDSTLLLVGSI+DSWDRLR++SF
Sbjct: 838  SQGKCGAISPESCVYPYNKGFTLPDSTLLLVGSIIDSWDRLRENSF 883


>emb|CAN72934.1| hypothetical protein VITISV_020616 [Vitis vinifera]
          Length = 2161

 Score =  252 bits (644), Expect = 2e-65
 Identities = 125/166 (75%), Positives = 139/166 (83%), Gaps = 1/166 (0%)
 Frame = -1

Query: 497  LELSLLKEAVPLNMRCSSTAFQMKWTSLFRKFFSRVRTALERQFKQGSWKPLISSKNDEV 318
            LELSLLKEA PLNMR  STAFQMKW SLFRKFF+RVRTALERQFKQGSW+P+     + V
Sbjct: 656  LELSLLKEAXPLNMRSCSTAFQMKWASLFRKFFARVRTALERQFKQGSWQPISHCNKNGV 715

Query: 317  DFDKKTKGTVALRAEDLFQFMRWFSSFLFFSCYPSAPYERKIMAMELILILINVWPVIPP 138
               K T+  V  RAEDLF FM+W SSFLFFSCYPSAPYERKIMAMELILI++NVW VIPP
Sbjct: 716  FPYKGTEEAVVSRAEDLFHFMKWLSSFLFFSCYPSAPYERKIMAMELILIMLNVWTVIPP 775

Query: 137  SQSN-GISTPASCLYPYNEGFTLPDSTLLLVGSIVDSWDRLRQSSF 3
            SQ   G  +P SC+YPYN+GFTLPDSTLLLVGSI+DSWDRLR++SF
Sbjct: 776  SQGKXGAISPESCVYPYNKGFTLPDSTLLLVGSIIDSWDRLRENSF 821


>ref|XP_002305983.1| predicted protein [Populus trichocarpa] gi|222848947|gb|EEE86494.1|
            predicted protein [Populus trichocarpa]
          Length = 2134

 Score =  231 bits (588), Expect = 6e-59
 Identities = 114/166 (68%), Positives = 135/166 (81%), Gaps = 1/166 (0%)
 Frame = -1

Query: 497  LELSLLKEAVPLNMRCSSTAFQMKWTSLFRKFFSRVRTALERQFKQGSWKPLISSKNDEV 318
            LEL+LLKEAV LNMR  ST FQMKWTSLFRKFF+RVRTALERQ KQGSW+PL+   N+  
Sbjct: 681  LELTLLKEAVLLNMRSCSTGFQMKWTSLFRKFFARVRTALERQLKQGSWQPLLDCNNNGA 740

Query: 317  DFDKKTKGTVALRAEDLFQFMRWFSSFLFFSCYPSAPYERKIMAMELILILINVWPVIPP 138
              +K  + ++  RAE+LF FMRW S FLFFSCYPSAPY+RKIMAM+L+LI++NVWP+   
Sbjct: 741  YSNKGIEESLIKRAENLFNFMRWLSCFLFFSCYPSAPYKRKIMAMDLLLIMLNVWPITLT 800

Query: 137  SQ-SNGISTPASCLYPYNEGFTLPDSTLLLVGSIVDSWDRLRQSSF 3
            SQ  +G   P S LYPY++G TLPDSTLLLVGSI+DSWDRLR+SSF
Sbjct: 801  SQDKDGSLRPESSLYPYSKGITLPDSTLLLVGSIIDSWDRLRESSF 846


>ref|XP_002517489.1| conserved hypothetical protein [Ricinus communis]
            gi|223543500|gb|EEF45031.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 2190

 Score =  227 bits (579), Expect = 7e-58
 Identities = 115/166 (69%), Positives = 132/166 (79%), Gaps = 1/166 (0%)
 Frame = -1

Query: 497  LELSLLKEAVPLNMRCSSTAFQMKWTSLFRKFFSRVRTALERQFKQGSWKPLISSKNDEV 318
            LEL+LLK+AVPLNMR  ST FQMKWTSLFRKFFSRVRTALERQFK GSW+PL + +  E 
Sbjct: 699  LELTLLKKAVPLNMRSCSTGFQMKWTSLFRKFFSRVRTALERQFKHGSWQPLANYQK-ES 757

Query: 317  DFDKKTKGTVALRAEDLFQFMRWFSSFLFFSCYPSAPYERKIMAMELILILINVWPVIPP 138
               K T+  +  RA DLF FMRW SSFLFFSCYPSAPY+RKIMAMELILI++NVWP++PP
Sbjct: 758  QSAKGTEEALVNRAGDLFNFMRWLSSFLFFSCYPSAPYKRKIMAMELILIMLNVWPIVPP 817

Query: 137  SQSNGISTPASC-LYPYNEGFTLPDSTLLLVGSIVDSWDRLRQSSF 3
            S+    S    C L PY+ G T P+S LLLVGSI+DSWDRLR+SSF
Sbjct: 818  SEDRCPSIAPECSLCPYSIGITSPESALLLVGSIIDSWDRLRESSF 863


>ref|XP_004163531.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized LOC101204483 [Cucumis
            sativus]
          Length = 2186

 Score =  222 bits (565), Expect = 3e-56
 Identities = 109/165 (66%), Positives = 129/165 (78%)
 Frame = -1

Query: 497  LELSLLKEAVPLNMRCSSTAFQMKWTSLFRKFFSRVRTALERQFKQGSWKPLISSKNDEV 318
            LEL+LLK+A+PLNMRC+STAFQMKW+SLFRKFFSRVRTALERQFK G+W PL S  N E 
Sbjct: 700  LELTLLKKAIPLNMRCTSTAFQMKWSSLFRKFFSRVRTALERQFKLGNWIPLASCCNRES 759

Query: 317  DFDKKTKGTVALRAEDLFQFMRWFSSFLFFSCYPSAPYERKIMAMELILILINVWPVIPP 138
                  +  VA RA+DLFQFM+W S FLFFSCYPSAPY RKIMAM+L L+++NVW ++P 
Sbjct: 760  YMPNGNEQIVAGRADDLFQFMKWLSCFLFFSCYPSAPYRRKIMAMDLFLVMLNVWSIVPS 819

Query: 137  SQSNGISTPASCLYPYNEGFTLPDSTLLLVGSIVDSWDRLRQSSF 3
             +        + L PYNEG TLPDS LLLV SI+DSWDRLR++SF
Sbjct: 820  KE----KCNETLLLPYNEGITLPDSVLLLVVSIIDSWDRLRENSF 860


Top