BLASTX nr result

ID: Coptis21_contig00026886 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00026886
         (354 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004144971.1| PREDICTED: uncharacterized protein LOC101219...    77   2e-12
ref|XP_002312716.1| predicted protein [Populus trichocarpa] gi|2...    70   1e-10
ref|XP_002277762.1| PREDICTED: uncharacterized protein LOC100259...    69   5e-10
ref|XP_002516851.1| protein binding protein, putative [Ricinus c...    67   2e-09
ref|XP_003546106.1| PREDICTED: uncharacterized protein LOC100527...    55   8e-06

>ref|XP_004144971.1| PREDICTED: uncharacterized protein LOC101219420 [Cucumis sativus]
           gi|449470479|ref|XP_004152944.1| PREDICTED:
           uncharacterized protein LOC101219282 [Cucumis sativus]
           gi|449507660|ref|XP_004163094.1| PREDICTED:
           uncharacterized protein LOC101227905 [Cucumis sativus]
          Length = 423

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 41/96 (42%), Positives = 60/96 (62%), Gaps = 5/96 (5%)
 Frame = +1

Query: 82  QPVTIAIEQDSKEAGKQIMEPIDEEVA-----GRNADLSVQIPPRPVVLGSSRSGKGFFQ 246
           QP++  + + ++E   +I++ ++E+ +      R  D+S+QIPPR    G SRSGKG  Q
Sbjct: 5   QPLSNGVSEITQEEDAEIVKSVNEQTSDTGHSSRRPDISLQIPPRTTGFGKSRSGKGLLQ 64

Query: 247 SQASFKGNSTPGSFLRSPSSKNKAASHESEGSSLLS 354
           SQ S KG  +PGSFLR+ S K K  + E E S+LLS
Sbjct: 65  SQGSNKGGLSPGSFLRALSFKRKGIAPEGEKSTLLS 100


>ref|XP_002312716.1| predicted protein [Populus trichocarpa] gi|222852536|gb|EEE90083.1|
           predicted protein [Populus trichocarpa]
          Length = 359

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 42/85 (49%), Positives = 57/85 (67%)
 Frame = +1

Query: 100 IEQDSKEAGKQIMEPIDEEVAGRNADLSVQIPPRPVVLGSSRSGKGFFQSQASFKGNSTP 279
           ++ D K A +   E ++ E + R +DLS+QIPPRPV  GSS SGKG   SQ S+K NS P
Sbjct: 4   LQADPKNA-EPSNEVLNPEPSERRSDLSLQIPPRPVGFGSSCSGKGLLHSQNSYKSNS-P 61

Query: 280 GSFLRSPSSKNKAASHESEGSSLLS 354
           GS L++ S K K+A+ + E SSLL+
Sbjct: 62  GSLLQTFSLKRKSAAPDGEKSSLLN 86


>ref|XP_002277762.1| PREDICTED: uncharacterized protein LOC100259554 [Vitis vinifera]
           gi|297736929|emb|CBI26130.3| unnamed protein product
           [Vitis vinifera]
          Length = 429

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 47/98 (47%), Positives = 55/98 (56%), Gaps = 6/98 (6%)
 Frame = +1

Query: 79  AQPVTI-AIEQDSKEAGKQIMEPIDEEVAG-----RNADLSVQIPPRPVVLGSSRSGKGF 240
           AQ VT  A E  S +A  QI+E  +E V       +  DLS+QIPPR V  G+SRSGKG 
Sbjct: 4   AQTVTAGASEASSPQANLQILERTNEVVIDSGPREKRPDLSLQIPPRSVNFGNSRSGKGL 63

Query: 241 FQSQASFKGNSTPGSFLRSPSSKNKAASHESEGSSLLS 354
            QSQ S KG S     LR  S K K A  + E SSLL+
Sbjct: 64  LQSQGSVKGISPSKGLLRGLSFKKKTALPDGERSSLLN 101


>ref|XP_002516851.1| protein binding protein, putative [Ricinus communis]
           gi|223543939|gb|EEF45465.1| protein binding protein,
           putative [Ricinus communis]
          Length = 441

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 38/84 (45%), Positives = 51/84 (60%), Gaps = 5/84 (5%)
 Frame = +1

Query: 118 EAGKQIMEPIDEEVAG-----RNADLSVQIPPRPVVLGSSRSGKGFFQSQASFKGNSTPG 282
           +A  ++ EP + E++      + +DL VQ+PPRPV  G SRSGKG   SQ S KG+S+ G
Sbjct: 2   QADLKLAEPSNGEISNPGPNTKRSDLLVQVPPRPVGFGPSRSGKGLMPSQNSCKGSSSSG 61

Query: 283 SFLRSPSSKNKAASHESEGSSLLS 354
            FLR  S K K A  + E S LL+
Sbjct: 62  GFLRGLSFKKKGAVPDGERSFLLN 85


>ref|XP_003546106.1| PREDICTED: uncharacterized protein LOC100527094 [Glycine max]
          Length = 422

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 36/99 (36%), Positives = 54/99 (54%), Gaps = 5/99 (5%)
 Frame = +1

Query: 73  MQAQPVTIAIEQDSKEAGKQIMEPIDEEVA-----GRNADLSVQIPPRPVVLGSSRSGKG 237
           MQA P   +   ++ E   Q +   ++EV+     GR  D+S+Q+PPRP+  GS+ SG+ 
Sbjct: 1   MQA-PQAASATDEAPEISHQAVPQRNKEVSDSGPGGRRPDISLQVPPRPIGFGSTSSGRV 59

Query: 238 FFQSQASFKGNSTPGSFLRSPSSKNKAASHESEGSSLLS 354
               Q+  KG S+   FLR+ S K K    + E SSLL+
Sbjct: 60  LDHCQSFGKGISSSRGFLRALSLKRKGNVADGERSSLLN 98


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