BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00026876
         (367 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFF18834.1| ribonucleotide reductase small subunit, partial [...   178   4e-43
ref|NP_001237733.1| ribonucleotide reductase small subunit [Glyc...   165   3e-39
ref|XP_002279943.1| PREDICTED: ribonucleoside-diphosphate reduct...   165   3e-39
ref|XP_002311826.1| predicted protein [Populus trichocarpa] gi|2...   165   4e-39
ref|XP_002516790.1| ribonucleoside-diphosphate reductase small c...   162   3e-38

>gb|AFF18834.1| ribonucleotide reductase small subunit, partial [Dimocarpus longan]
          Length = 180

 Score =  178 bits (452), Expect = 4e-43
 Identities = 83/104 (79%), Positives = 92/104 (88%)
 Frame = +2

Query: 56  MGSLENENGRXXXXXXXXPILMENSQRFCMFPVRYKQLWEMYKKAQASFWTAEEVDLSQD 235
           MGSLENE  +        PILME +QRFCMFP+RYKQLWEMYKKAQASFWTAEEVDLSQD
Sbjct: 1   MGSLENERNKLEEGVEEEPILMEQNQRFCMFPIRYKQLWEMYKKAQASFWTAEEVDLSQD 60

Query: 236 IQQWEKLTDSEKHFISHVLAFFAASDGIVLENLAARFLKDVQVP 367
           +QQWE+L+DSEKHFI+HVLAFFAASDGIVLENLAARFL D+Q+P
Sbjct: 61  VQQWERLSDSEKHFITHVLAFFAASDGIVLENLAARFLNDIQIP 104


>ref|NP_001237733.1| ribonucleotide reductase small subunit [Glycine max]
           gi|4894211|gb|AAD32302.1| ribonucleotide reductase small
           subunit [Glycine max]
          Length = 339

 Score =  165 bits (418), Expect = 3e-39
 Identities = 81/104 (77%), Positives = 88/104 (84%)
 Frame = +2

Query: 56  MGSLENENGRXXXXXXXXPILMENSQRFCMFPVRYKQLWEMYKKAQASFWTAEEVDLSQD 235
           MGSLEN NG         PILME SQRFCMFP+RYKQ+WEMYKKA+ASFWTAEEVDLS D
Sbjct: 1   MGSLEN-NGVDKARDEQEPILMEQSQRFCMFPIRYKQIWEMYKKAEASFWTAEEVDLSYD 59

Query: 236 IQQWEKLTDSEKHFISHVLAFFAASDGIVLENLAARFLKDVQVP 367
           +Q WE L+ SEKHFI+HVLAFFAASDGIVLENLAARFL DVQ+P
Sbjct: 60  VQHWETLSVSEKHFITHVLAFFAASDGIVLENLAARFLSDVQIP 103


>ref|XP_002279943.1| PREDICTED: ribonucleoside-diphosphate reductase small chain A
           [Vitis vinifera]
          Length = 340

 Score =  165 bits (418), Expect = 3e-39
 Identities = 80/105 (76%), Positives = 90/105 (85%), Gaps = 1/105 (0%)
 Frame = +2

Query: 56  MGSLENE-NGRXXXXXXXXPILMENSQRFCMFPVRYKQLWEMYKKAQASFWTAEEVDLSQ 232
           MGSL N  + R        PILM+NSQRFCMFP+RY+QLWEMYKKA+ASFWTAEEVDLS 
Sbjct: 1   MGSLTNGIDKRPDEEQEEEPILMKNSQRFCMFPIRYRQLWEMYKKAEASFWTAEEVDLSH 60

Query: 233 DIQQWEKLTDSEKHFISHVLAFFAASDGIVLENLAARFLKDVQVP 367
           D+QQWE L++SEKHFISHVLAFFAASDGIVLENLAARFL D+Q+P
Sbjct: 61  DVQQWESLSNSEKHFISHVLAFFAASDGIVLENLAARFLHDIQIP 105


>ref|XP_002311826.1| predicted protein [Populus trichocarpa] gi|222851646|gb|EEE89193.1|
           predicted protein [Populus trichocarpa]
          Length = 342

 Score =  165 bits (417), Expect = 4e-39
 Identities = 81/106 (76%), Positives = 90/106 (84%), Gaps = 2/106 (1%)
 Frame = +2

Query: 56  MGSLEN--ENGRXXXXXXXXPILMENSQRFCMFPVRYKQLWEMYKKAQASFWTAEEVDLS 229
           MGSL N  E+ R        PIL E +QRFCMFP+RYK+LWEMYKKA+ASFWTAEEVDLS
Sbjct: 1   MGSLRNGTESERIREEDKQEPILKEQNQRFCMFPIRYKELWEMYKKAEASFWTAEEVDLS 60

Query: 230 QDIQQWEKLTDSEKHFISHVLAFFAASDGIVLENLAARFLKDVQVP 367
           +D+QQWE L+DSEKHFISHVLAFFAASDGIVLENLAARFL DVQ+P
Sbjct: 61  RDMQQWEALSDSEKHFISHVLAFFAASDGIVLENLAARFLYDVQIP 106


>ref|XP_002516790.1| ribonucleoside-diphosphate reductase small chain, putative [Ricinus
           communis] gi|223543878|gb|EEF45404.1|
           ribonucleoside-diphosphate reductase small chain,
           putative [Ricinus communis]
          Length = 342

 Score =  162 bits (409), Expect = 3e-38
 Identities = 80/106 (75%), Positives = 87/106 (82%), Gaps = 2/106 (1%)
 Frame = +2

Query: 56  MGSLEN--ENGRXXXXXXXXPILMENSQRFCMFPVRYKQLWEMYKKAQASFWTAEEVDLS 229
           MGSL N  +  R        PIL E +QRFCMFP+RYK LWEMYKKA+ASFWTAEEVDLS
Sbjct: 1   MGSLTNSKDEERAREDEEEEPILKEQNQRFCMFPIRYKSLWEMYKKAEASFWTAEEVDLS 60

Query: 230 QDIQQWEKLTDSEKHFISHVLAFFAASDGIVLENLAARFLKDVQVP 367
           QD+QQWE L+ SEKHFISHVLAFFAASDGIVLENLAARFL D+QVP
Sbjct: 61  QDVQQWETLSVSEKHFISHVLAFFAASDGIVLENLAARFLNDIQVP 106