BLASTX nr result
ID: Coptis21_contig00026869
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00026869
(904 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002279655.1| PREDICTED: uncharacterized protein LOC100255... 474 e-132
ref|XP_003530919.1| PREDICTED: uncharacterized protein LOC100809... 456 e-126
ref|XP_002327325.1| predicted protein [Populus trichocarpa] gi|2... 451 e-125
ref|XP_002881945.1| hypothetical protein ARALYDRAFT_903808 [Arab... 437 e-120
ref|NP_566005.1| transcription termination factor domain-contain... 437 e-120
>ref|XP_002279655.1| PREDICTED: uncharacterized protein LOC100255927 [Vitis vinifera]
Length = 481
Score = 474 bits (1221), Expect = e-132
Identities = 241/285 (84%), Positives = 259/285 (90%)
Frame = -3
Query: 902 LVSIGVSPRDIGPMVTQYPYLLGMRVGTVIKPIVDYLVSLGIPKKILARMFEKRAYVLGY 723
LVSIGVSPRDIGPMVTQYPY LGMRVGTVIKPIVDYLVSLG+PKK+LARMFEKRAYVLGY
Sbjct: 198 LVSIGVSPRDIGPMVTQYPYFLGMRVGTVIKPIVDYLVSLGLPKKVLARMFEKRAYVLGY 257
Query: 722 DLEETIKPNVDCLLSFGIRREALASVIAQYPQILGLPLKAKLSSQQYFFNLKLKIDPDGF 543
DLEE IKPNVDCL+SFGIRREALASVIAQ+PQILGLPLKAKLSSQQYFFNLKLKIDPDGF
Sbjct: 258 DLEECIKPNVDCLVSFGIRREALASVIAQFPQILGLPLKAKLSSQQYFFNLKLKIDPDGF 317
Query: 542 ARVVEKMPQMVSLNQSVIMKPIEFLRGRTIPAEDVAKMVVKCPQLVALRVELMKNSYYFF 363
ARV+E+MPQ+VSLNQ+VIMKP+EFL GR IPA DVAKMVVKCPQLVALRVELMKN YYFF
Sbjct: 318 ARVIERMPQIVSLNQNVIMKPVEFLLGRGIPAVDVAKMVVKCPQLVALRVELMKNGYYFF 377
Query: 362 KSEMKRSIQELVEFPEYFTYSLESRIKPRYQSLSSKGVKFSLAWFLNCSDQRFEERLQAD 183
KSEM R ++ELVEFPEYFTYSLESRIKPRYQ L SKGV+ SL WFLNCSDQRFEERLQAD
Sbjct: 378 KSEMGRQVKELVEFPEYFTYSLESRIKPRYQRLQSKGVRSSLDWFLNCSDQRFEERLQAD 437
Query: 182 FIETESAGPSFYVGGKLELPGSEIVXXXXXXXXXXEILYRRTVSL 48
+IE E+ GPSF +GGKL+LPG+E+V E LYRRTVSL
Sbjct: 438 YIEMETIGPSFCMGGKLQLPGNEVVSDEEDESDDEE-LYRRTVSL 481
Score = 60.1 bits (144), Expect = 7e-07
Identities = 35/148 (23%), Positives = 72/148 (48%), Gaps = 1/148 (0%)
Frame = -3
Query: 860 VTQYPYLLGMRVGTVIKPIVDYLVSLGIPKKILARMFEKRAYVLGYDLEETIKPNVDCLL 681
+ +YP +LG V + P++ YL +GIP+ L VL + + P V L
Sbjct: 104 LNEYPLMLGCSVRKNMIPVLGYLEKIGIPRSKLGEFVVNYPQVLHASVVVELAPVVKFLR 163
Query: 680 SFGIRREALASVIAQYPQILGLPLKAKLSSQQYFFNLKLKIDPDGFARVVEKMPQMVSLN 501
+ ++ + V+ +YP++LG L+ +S+ + + + + P +V + P + +
Sbjct: 164 GLDVDKQDIGYVLMKYPELLGFKLEGTMSTSVAYL-VSIGVSPRDIGPMVTQYPYFLGMR 222
Query: 500 QSVIMKPI-EFLRGRTIPAEDVAKMVVK 420
++KPI ++L +P + +A+M K
Sbjct: 223 VGTVIKPIVDYLVSLGLPKKVLARMFEK 250
>ref|XP_003530919.1| PREDICTED: uncharacterized protein LOC100809590 [Glycine max]
Length = 499
Score = 456 bits (1174), Expect = e-126
Identities = 227/285 (79%), Positives = 254/285 (89%)
Frame = -3
Query: 902 LVSIGVSPRDIGPMVTQYPYLLGMRVGTVIKPIVDYLVSLGIPKKILARMFEKRAYVLGY 723
LVSIGV+PRDIGPMVTQYPYLLGMRVGTVIKP++DYLV LG+PKK+LARM EKRAYVLGY
Sbjct: 216 LVSIGVNPRDIGPMVTQYPYLLGMRVGTVIKPMIDYLVDLGLPKKVLARMLEKRAYVLGY 275
Query: 722 DLEETIKPNVDCLLSFGIRREALASVIAQYPQILGLPLKAKLSSQQYFFNLKLKIDPDGF 543
DLEET+KPNV+CL+SFG+ R+ LAS+IAQYPQILGLPLKAKLS+QQYFF+LKLK+DP+GF
Sbjct: 276 DLEETVKPNVECLISFGVGRDCLASIIAQYPQILGLPLKAKLSTQQYFFSLKLKVDPEGF 335
Query: 542 ARVVEKMPQMVSLNQSVIMKPIEFLRGRTIPAEDVAKMVVKCPQLVALRVELMKNSYYFF 363
ARVVE MPQ+VSL+Q VIMKP+EFL GRTIPA+DVA MVVKCPQLVALRVELMKNSYYFF
Sbjct: 336 ARVVENMPQVVSLHQHVIMKPVEFLLGRTIPAQDVASMVVKCPQLVALRVELMKNSYYFF 395
Query: 362 KSEMKRSIQELVEFPEYFTYSLESRIKPRYQSLSSKGVKFSLAWFLNCSDQRFEERLQAD 183
KSEM R +QELVEFPEYFTYSLESRIKPRYQ L SKG++ SL W LNCSDQRFEERLQ
Sbjct: 396 KSEMGRPLQELVEFPEYFTYSLESRIKPRYQRLKSKGIRCSLNWMLNCSDQRFEERLQGH 455
Query: 182 FIETESAGPSFYVGGKLELPGSEIVXXXXXXXXXXEILYRRTVSL 48
+IETES GP F +GGKLELPG+ +V E+LYRRTVSL
Sbjct: 456 YIETESVGPRFCMGGKLELPGNGLV-SDEEEESDDELLYRRTVSL 499
Score = 58.9 bits (141), Expect = 2e-06
Identities = 34/148 (22%), Positives = 74/148 (50%), Gaps = 1/148 (0%)
Frame = -3
Query: 860 VTQYPYLLGMRVGTVIKPIVDYLVSLGIPKKILARMFEKRAYVLGYDLEETIKPNVDCLL 681
+ YP +LG V + P++ YL +GI + L + VL + + P V L
Sbjct: 122 INNYPLMLGCSVRKNMIPVLGYLEKIGIARPKLGGFVKNYPQVLHASVIVELAPVVKFLR 181
Query: 680 SFGIRREALASVIAQYPQILGLPLKAKLSSQQYFFNLKLKIDPDGFARVVEKMPQMVSLN 501
+ ++ + V+ +YP++LG L+ +S+ + + + ++P +V + P ++ +
Sbjct: 182 GLDVEKDDIGYVLQKYPELLGFKLEGTMSTSVAYL-VSIGVNPRDIGPMVTQYPYLLGMR 240
Query: 500 QSVIMKP-IEFLRGRTIPAEDVAKMVVK 420
++KP I++L +P + +A+M+ K
Sbjct: 241 VGTVIKPMIDYLVDLGLPKKVLARMLEK 268
>ref|XP_002327325.1| predicted protein [Populus trichocarpa] gi|222835695|gb|EEE74130.1|
predicted protein [Populus trichocarpa]
Length = 514
Score = 451 bits (1161), Expect = e-125
Identities = 224/287 (78%), Positives = 255/287 (88%), Gaps = 2/287 (0%)
Frame = -3
Query: 902 LVSIGVSPRDIGPMVTQYPYLLGMRVGTVIKPIVDYLVSLGIPKKILARMFEKRAYVLGY 723
LVSIGVSPRDIGPMVTQYPYLLGMRVGT+IKP+VDYLVSLG+PKKI+ARM EKR YVLGY
Sbjct: 228 LVSIGVSPRDIGPMVTQYPYLLGMRVGTMIKPLVDYLVSLGLPKKIVARMLEKRPYVLGY 287
Query: 722 DLEETIKPNVDCLLSFGIRREALASVIAQYPQILGLPLKAKLSSQQYFFNLKLKIDPDGF 543
DL+ET+KPNVDCL+SFGIRRE LAS++AQYP ILGLPLKAKLSSQQYFFNLKLKIDP+ F
Sbjct: 288 DLQETVKPNVDCLISFGIRREVLASIVAQYPPILGLPLKAKLSSQQYFFNLKLKIDPERF 347
Query: 542 ARVVEKMPQMVSLNQSVIMKPIEFLRGRTIPAEDVAKMVVKCPQLVALRVELMKNSYYFF 363
ARV+EKMPQ+VSLNQ+VIMKP++FL R IP+EDVA MV+KCPQL+ALRV LMKNSYYFF
Sbjct: 348 ARVIEKMPQIVSLNQNVIMKPVQFLLERAIPSEDVATMVIKCPQLLALRVPLMKNSYYFF 407
Query: 362 KSEMKRSIQELVEFPEYFTYSLESRIKPRYQSLSSKGVKFSLAWFLNCSDQRFEERLQAD 183
KSEM R ++ELVEFPEYFTYSLESRIKPRY+ L SKG++ SL WFLNCSD+RFEERL+ D
Sbjct: 408 KSEMGRPLKELVEFPEYFTYSLESRIKPRYEMLKSKGIRSSLNWFLNCSDKRFEERLEGD 467
Query: 182 FIETESAGPSFYVGGKLELPGSEIV--XXXXXXXXXXEILYRRTVSL 48
+IE+ES GPSF +GGKLELPG EI+ E+L+RRTVSL
Sbjct: 468 YIESESLGPSFCMGGKLELPGCEILSDEEDEIDDDEDEVLFRRTVSL 514
Score = 75.5 bits (184), Expect = 2e-11
Identities = 58/226 (25%), Positives = 110/226 (48%), Gaps = 4/226 (1%)
Frame = -3
Query: 902 LVSIGVSPRDIGPMVTQYPYLLGMRVGTVIKPIVDYLVSLGIPKKILARMFEKRAYVLGY 723
L IG+S +G V YP +L V ++P++ +L L + K + + +K +LG+
Sbjct: 156 LEKIGISRSKLGEFVKSYPQVLHASVVVELQPVIKFLRGLDVDKLDIGYVLQKYPELLGF 215
Query: 722 DLEETIKPNVDCLLSFGIRREALASVIAQYPQILGLPLKAKLSSQQYFFNLKLKIDPDGF 543
LE T+ +V L+S G+ + ++ QYP +LG+ + + + + L +
Sbjct: 216 KLEGTMSTSVAYLVSIGVSPRDIGPMVTQYPYLLGMRVGTMIKPLVDYL-VSLGLPKKIV 274
Query: 542 ARVVEKMPQMVSLNQSVIMKP-IEFLRGRTIPAEDVAKMVVKCPQLVALRVEL-MKNSYY 369
AR++EK P ++ + +KP ++ L I E +A +V + P ++ L ++ + + Y
Sbjct: 275 ARMLEKRPYVLGYDLQETVKPNVDCLISFGIRREVLASIVAQYPPILGLPLKAKLSSQQY 334
Query: 368 FFKSEMKRSIQELVEFPEYFTYSLES--RIKPRYQSLSSKGVKFSL 237
FF ++K PE F +E +I Q++ K V+F L
Sbjct: 335 FFNLKLKID-------PERFARVIEKMPQIVSLNQNVIMKPVQFLL 373
Score = 62.0 bits (149), Expect = 2e-07
Identities = 35/153 (22%), Positives = 77/153 (50%), Gaps = 1/153 (0%)
Frame = -3
Query: 860 VTQYPYLLGMRVGTVIKPIVDYLVSLGIPKKILARMFEKRAYVLGYDLEETIKPNVDCLL 681
+ +YP +LG V I P++ YL +GI + L + VL + ++P + L
Sbjct: 134 INEYPLMLGCSVRKNIIPVLGYLEKIGISRSKLGEFVKSYPQVLHASVVVELQPVIKFLR 193
Query: 680 SFGIRREALASVIAQYPQILGLPLKAKLSSQQYFFNLKLKIDPDGFARVVEKMPQMVSLN 501
+ + + V+ +YP++LG L+ +S+ + + + + P +V + P ++ +
Sbjct: 194 GLDVDKLDIGYVLQKYPELLGFKLEGTMSTSVAYL-VSIGVSPRDIGPMVTQYPYLLGMR 252
Query: 500 QSVIMKP-IEFLRGRTIPAEDVAKMVVKCPQLV 405
++KP +++L +P + VA+M+ K P ++
Sbjct: 253 VGTMIKPLVDYLVSLGLPKKIVARMLEKRPYVL 285
>ref|XP_002881945.1| hypothetical protein ARALYDRAFT_903808 [Arabidopsis lyrata subsp.
lyrata] gi|297327784|gb|EFH58204.1| hypothetical protein
ARALYDRAFT_903808 [Arabidopsis lyrata subsp. lyrata]
Length = 508
Score = 437 bits (1124), Expect = e-120
Identities = 209/285 (73%), Positives = 251/285 (88%)
Frame = -3
Query: 902 LVSIGVSPRDIGPMVTQYPYLLGMRVGTVIKPIVDYLVSLGIPKKILARMFEKRAYVLGY 723
LVSIGVSPRDIGPMVTQYPYLLGMRVGT+IKP+VDYL+S+G+PKKI+ARM EKRAY++GY
Sbjct: 224 LVSIGVSPRDIGPMVTQYPYLLGMRVGTMIKPLVDYLISIGLPKKIVARMLEKRAYIVGY 283
Query: 722 DLEETIKPNVDCLLSFGIRREALASVIAQYPQILGLPLKAKLSSQQYFFNLKLKIDPDGF 543
+LEET+KPNVDCL+SFG+++E L +IAQYPQILGLP+KAK+S+QQYFF+LKLKIDP+GF
Sbjct: 284 NLEETVKPNVDCLISFGVKKELLPLLIAQYPQILGLPVKAKMSTQQYFFSLKLKIDPEGF 343
Query: 542 ARVVEKMPQMVSLNQSVIMKPIEFLRGRTIPAEDVAKMVVKCPQLVALRVELMKNSYYFF 363
ARVVEKMPQ+VSL Q+VIMKPIEFL GR ED+AKMVV+CPQ++ RVELMKNSYYF+
Sbjct: 344 ARVVEKMPQIVSLKQNVIMKPIEFLLGRAFQVEDIAKMVVRCPQILCSRVELMKNSYYFY 403
Query: 362 KSEMKRSIQELVEFPEYFTYSLESRIKPRYQSLSSKGVKFSLAWFLNCSDQRFEERLQAD 183
K+EM R ++ELVE+PEYFTYSLESRIKPRYQ L SKG++ SL WFLNCSDQRFEERLQ +
Sbjct: 404 KTEMGRPMKELVEYPEYFTYSLESRIKPRYQKLQSKGIRSSLNWFLNCSDQRFEERLQGN 463
Query: 182 FIETESAGPSFYVGGKLELPGSEIVXXXXXXXXXXEILYRRTVSL 48
FI+ ++ GP F +GGKLE+PG EIV E+LYRRT++L
Sbjct: 464 FIDPDTEGPMFDMGGKLEMPGGEIVSDEEEDESDDEVLYRRTLTL 508
Score = 63.9 bits (154), Expect = 5e-08
Identities = 37/158 (23%), Positives = 78/158 (49%), Gaps = 1/158 (0%)
Frame = -3
Query: 860 VTQYPYLLGMRVGTVIKPIVDYLVSLGIPKKILARMFEKRAYVLGYDLEETIKPNVDCLL 681
+ +YP +LG V + P++ YL +GI + L + VL + + P V L
Sbjct: 130 INEYPLMLGCSVRKNLIPVLAYLEKIGISRSKLGEFVKNYPQVLHASVVVELAPVVKFLR 189
Query: 680 SFGIRREALASVIAQYPQILGLPLKAKLSSQQYFFNLKLKIDPDGFARVVEKMPQMVSLN 501
+ ++ L V+ +YP++LG L+ +S+ + + + + P +V + P ++ +
Sbjct: 190 GLDVEKQDLGYVLMKYPELLGFKLEGTMSTSVAYL-VSIGVSPRDIGPMVTQYPYLLGMR 248
Query: 500 QSVIMKP-IEFLRGRTIPAEDVAKMVVKCPQLVALRVE 390
++KP +++L +P + VA+M+ K +V +E
Sbjct: 249 VGTMIKPLVDYLISIGLPKKIVARMLEKRAYIVGYNLE 286
>ref|NP_566005.1| transcription termination factor domain-containing protein
[Arabidopsis thaliana] gi|3212859|gb|AAC23410.1|
expressed protein [Arabidopsis thaliana]
gi|14532592|gb|AAK64024.1| unknown protein [Arabidopsis
thaliana] gi|19310761|gb|AAL85111.1| unknown protein
[Arabidopsis thaliana] gi|330255268|gb|AEC10362.1|
transcription termination factor domain-containing
protein [Arabidopsis thaliana]
Length = 507
Score = 437 bits (1123), Expect = e-120
Identities = 208/285 (72%), Positives = 252/285 (88%)
Frame = -3
Query: 902 LVSIGVSPRDIGPMVTQYPYLLGMRVGTVIKPIVDYLVSLGIPKKILARMFEKRAYVLGY 723
LVSIGVSPRDIGPMVTQYPYLLGMRVGT+IKP+VDYL+S+G+PKKI+ARM EKR+Y++GY
Sbjct: 223 LVSIGVSPRDIGPMVTQYPYLLGMRVGTMIKPLVDYLISIGLPKKIVARMLEKRSYIVGY 282
Query: 722 DLEETIKPNVDCLLSFGIRREALASVIAQYPQILGLPLKAKLSSQQYFFNLKLKIDPDGF 543
+LEET+KPNVDCL+SFG+++E L +IAQYPQILGLP+KAK+S+QQYFF+LKLKIDP+GF
Sbjct: 283 NLEETVKPNVDCLISFGVKKELLPLLIAQYPQILGLPVKAKMSTQQYFFSLKLKIDPEGF 342
Query: 542 ARVVEKMPQMVSLNQSVIMKPIEFLRGRTIPAEDVAKMVVKCPQLVALRVELMKNSYYFF 363
ARVVEKMPQ+VSL Q+VIMKPIEFL GR ED+AKMVV+CPQ++ RVELMKNSYYF+
Sbjct: 343 ARVVEKMPQIVSLKQNVIMKPIEFLLGRAFQVEDIAKMVVRCPQILCSRVELMKNSYYFY 402
Query: 362 KSEMKRSIQELVEFPEYFTYSLESRIKPRYQSLSSKGVKFSLAWFLNCSDQRFEERLQAD 183
K+EM R ++ELVE+PEYFTYSLESRIKPRYQ L SKG++ SL WFLNCSDQRFEERLQ +
Sbjct: 403 KTEMGRPMKELVEYPEYFTYSLESRIKPRYQKLQSKGIRSSLNWFLNCSDQRFEERLQGN 462
Query: 182 FIETESAGPSFYVGGKLELPGSEIVXXXXXXXXXXEILYRRTVSL 48
FI+ ++ GP+F +GGKLE+PG EIV E+LYRRT++L
Sbjct: 463 FIDPDTEGPTFDMGGKLEMPGGEIVTDEEEDESDDEVLYRRTLTL 507
Score = 63.9 bits (154), Expect = 5e-08
Identities = 37/158 (23%), Positives = 78/158 (49%), Gaps = 1/158 (0%)
Frame = -3
Query: 860 VTQYPYLLGMRVGTVIKPIVDYLVSLGIPKKILARMFEKRAYVLGYDLEETIKPNVDCLL 681
+ +YP +LG V + P++ YL +GI + L + VL + + P V L
Sbjct: 129 INEYPLMLGCSVRKNLIPVLAYLEKIGISRSKLGEFVKNYPQVLHASVVVELAPVVKFLR 188
Query: 680 SFGIRREALASVIAQYPQILGLPLKAKLSSQQYFFNLKLKIDPDGFARVVEKMPQMVSLN 501
+ ++ L V+ +YP++LG L+ +S+ + + + + P +V + P ++ +
Sbjct: 189 GLDVEKQDLGYVLMKYPELLGFKLEGTMSTSVAYL-VSIGVSPRDIGPMVTQYPYLLGMR 247
Query: 500 QSVIMKP-IEFLRGRTIPAEDVAKMVVKCPQLVALRVE 390
++KP +++L +P + VA+M+ K +V +E
Sbjct: 248 VGTMIKPLVDYLISIGLPKKIVARMLEKRSYIVGYNLE 285