BLASTX nr result

ID: Coptis21_contig00026851 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00026851
         (295 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512425.1| DNA repair protein rad9, putative [Ricinus c...   156   2e-36
ref|XP_002279397.1| PREDICTED: cell cycle checkpoint control pro...   155   4e-36
ref|XP_003554647.1| PREDICTED: cell cycle checkpoint control pro...   154   9e-36
ref|XP_003521693.1| PREDICTED: cell cycle checkpoint control pro...   152   2e-35
ref|XP_003521692.1| PREDICTED: cell cycle checkpoint control pro...   152   2e-35

>ref|XP_002512425.1| DNA repair protein rad9, putative [Ricinus communis]
           gi|223548386|gb|EEF49877.1| DNA repair protein rad9,
           putative [Ricinus communis]
          Length = 481

 Score =  156 bits (394), Expect = 2e-36
 Identities = 80/96 (83%), Positives = 86/96 (89%)
 Frame = +3

Query: 6   SSFVVRPRDLNRLLANF*SSLQEITVIATEQNSMPTDAANEILGKAVELRSYIHPTKDNS 185
           SS VVRPRDLNRLLANF SSLQEITVIATE  S+P+D A+EI GKAVELRSYI PTKDN 
Sbjct: 139 SSLVVRPRDLNRLLANFQSSLQEITVIATEPASLPSDGASEIGGKAVELRSYIDPTKDN- 197

Query: 186 DTALHTQLWIDPTEEFLQYTHTGDPVDVTFAVKELK 293
           D++LHTQLWIDP EEF+QYTHTGDPVDVTF VKELK
Sbjct: 198 DSSLHTQLWIDPAEEFVQYTHTGDPVDVTFGVKELK 233


>ref|XP_002279397.1| PREDICTED: cell cycle checkpoint control protein RAD9A [Vitis
           vinifera] gi|296089705|emb|CBI39524.3| unnamed protein
           product [Vitis vinifera]
          Length = 447

 Score =  155 bits (391), Expect = 4e-36
 Identities = 78/96 (81%), Positives = 86/96 (89%)
 Frame = +3

Query: 6   SSFVVRPRDLNRLLANF*SSLQEITVIATEQNSMPTDAANEILGKAVELRSYIHPTKDNS 185
           S+FVVRPRDLNRLLANF SSLQEIT+IATE  S+P+DAA EI GKAVELRSYI PTKDN 
Sbjct: 139 SNFVVRPRDLNRLLANFQSSLQEITIIATEPTSLPSDAAGEIGGKAVELRSYIDPTKDN- 197

Query: 186 DTALHTQLWIDPTEEFLQYTHTGDPVDVTFAVKELK 293
           D++LHTQLWIDP EEF+QY H+GDPVDVTF VKELK
Sbjct: 198 DSSLHTQLWIDPMEEFVQYVHSGDPVDVTFGVKELK 233


>ref|XP_003554647.1| PREDICTED: cell cycle checkpoint control protein RAD9A-like
           [Glycine max]
          Length = 449

 Score =  154 bits (388), Expect = 9e-36
 Identities = 77/96 (80%), Positives = 86/96 (89%)
 Frame = +3

Query: 6   SSFVVRPRDLNRLLANF*SSLQEITVIATEQNSMPTDAANEILGKAVELRSYIHPTKDNS 185
           S+FVV PRDL+RLLANF SSLQEIT+IATE +S+P DA+NEI GKAVELRSY+ PTKDN 
Sbjct: 139 SNFVVSPRDLSRLLANFQSSLQEITIIATEPSSLPLDASNEIGGKAVELRSYMDPTKDN- 197

Query: 186 DTALHTQLWIDPTEEFLQYTHTGDPVDVTFAVKELK 293
           DT LHTQLWIDP EEFLQY HTGDP+DVTF+VKELK
Sbjct: 198 DTLLHTQLWIDPKEEFLQYVHTGDPIDVTFSVKELK 233


>ref|XP_003521693.1| PREDICTED: cell cycle checkpoint control protein RAD9A-like isoform
           2 [Glycine max]
          Length = 430

 Score =  152 bits (385), Expect = 2e-35
 Identities = 77/96 (80%), Positives = 86/96 (89%)
 Frame = +3

Query: 6   SSFVVRPRDLNRLLANF*SSLQEITVIATEQNSMPTDAANEILGKAVELRSYIHPTKDNS 185
           S+FVVRPRDL+RLLANF SSLQEIT+IATE +S+ TDA+NEI GK VELRSY+ PTKDN 
Sbjct: 139 SNFVVRPRDLSRLLANFQSSLQEITIIATEPSSLLTDASNEIGGKEVELRSYMDPTKDN- 197

Query: 186 DTALHTQLWIDPTEEFLQYTHTGDPVDVTFAVKELK 293
           DT LHTQLWIDP EEFLQY HTGDP+DVTF+VKELK
Sbjct: 198 DTLLHTQLWIDPKEEFLQYVHTGDPIDVTFSVKELK 233


>ref|XP_003521692.1| PREDICTED: cell cycle checkpoint control protein RAD9A-like isoform
           1 [Glycine max]
          Length = 449

 Score =  152 bits (385), Expect = 2e-35
 Identities = 77/96 (80%), Positives = 86/96 (89%)
 Frame = +3

Query: 6   SSFVVRPRDLNRLLANF*SSLQEITVIATEQNSMPTDAANEILGKAVELRSYIHPTKDNS 185
           S+FVVRPRDL+RLLANF SSLQEIT+IATE +S+ TDA+NEI GK VELRSY+ PTKDN 
Sbjct: 139 SNFVVRPRDLSRLLANFQSSLQEITIIATEPSSLLTDASNEIGGKEVELRSYMDPTKDN- 197

Query: 186 DTALHTQLWIDPTEEFLQYTHTGDPVDVTFAVKELK 293
           DT LHTQLWIDP EEFLQY HTGDP+DVTF+VKELK
Sbjct: 198 DTLLHTQLWIDPKEEFLQYVHTGDPIDVTFSVKELK 233


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