BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00026844
         (257 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30347.3| unnamed protein product [Vitis vinifera]               91   8e-17
ref|XP_002275884.1| PREDICTED: putative pentatricopeptide repeat...    91   8e-17
emb|CAN66059.1| hypothetical protein VITISV_017037 [Vitis vinifera]    91   8e-17
ref|XP_003609609.1| Pentatricopeptide repeat-containing protein ...    89   4e-16
gb|AEP33757.1| organelle transcript processing 82, partial [Aeth...    88   8e-16

>emb|CBI30347.3| unnamed protein product [Vitis vinifera]
          Length = 560

 Score = 91.3 bits (225), Expect = 8e-17
 Identities = 42/81 (51%), Positives = 60/81 (74%)
 Frame = -3

Query: 243 DVFVATNLIELYVSCGSVSVAHKVFDEMPVKDTVSWTAIMSGYVNQGSSNMAMARKFFEE 64
           DVFV T+LI+LY  CG +  A KVFDEM  ++ VSWTA+++GY +   S++  ARK F+E
Sbjct: 205 DVFVMTSLIDLYGKCGEILCARKVFDEMGERNVVSWTAMIAGYAS--FSDLVEARKLFDE 262

Query: 63  MPVKDLVAWNTMVAGYVKIGE 1
           MP K+ V+WN +++GYVK G+
Sbjct: 263 MPEKNAVSWNAIISGYVKCGD 283


>ref|XP_002275884.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g37570 [Vitis vinifera]
          Length = 561

 Score = 91.3 bits (225), Expect = 8e-17
 Identities = 42/81 (51%), Positives = 60/81 (74%)
 Frame = -3

Query: 243 DVFVATNLIELYVSCGSVSVAHKVFDEMPVKDTVSWTAIMSGYVNQGSSNMAMARKFFEE 64
           DVFV T+LI+LY  CG +  A KVFDEM  ++ VSWTA+++GY +   S++  ARK F+E
Sbjct: 157 DVFVMTSLIDLYGKCGEILCARKVFDEMGERNVVSWTAMIAGYAS--FSDLVEARKLFDE 214

Query: 63  MPVKDLVAWNTMVAGYVKIGE 1
           MP K+ V+WN +++GYVK G+
Sbjct: 215 MPEKNAVSWNAIISGYVKCGD 235



 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 34/74 (45%), Positives = 51/74 (68%)
 Frame = -3

Query: 222 LIELYVSCGSVSVAHKVFDEMPVKDTVSWTAIMSGYVNQGSSNMAMARKFFEEMPVKDLV 43
           +I  YV CG +  A K+FDEMP ++ VS+T ++ GY   G  +MA AR  FEE P +D+V
Sbjct: 226 IISGYVKCGDLRSARKMFDEMPHRNVVSFTTMIDGYAKSG--DMASARFVFEEAPERDVV 283

Query: 42  AWNTMVAGYVKIGE 1
           AW+ +++GYV+ G+
Sbjct: 284 AWSALISGYVQNGQ 297


>emb|CAN66059.1| hypothetical protein VITISV_017037 [Vitis vinifera]
          Length = 546

 Score = 91.3 bits (225), Expect = 8e-17
 Identities = 42/81 (51%), Positives = 60/81 (74%)
 Frame = -3

Query: 243 DVFVATNLIELYVSCGSVSVAHKVFDEMPVKDTVSWTAIMSGYVNQGSSNMAMARKFFEE 64
           DVFV T+LI+LY  CG +  A KVFDEM  ++ VSWTA+++GY +   S++  ARK F+E
Sbjct: 157 DVFVMTSLIDLYGKCGEILCARKVFDEMGERNVVSWTAMIAGYAS--FSDLVEARKLFDE 214

Query: 63  MPVKDLVAWNTMVAGYVKIGE 1
           MP K+ V+WN +++GYVK G+
Sbjct: 215 MPEKNAVSWNAIISGYVKCGD 235



 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 30/66 (45%), Positives = 44/66 (66%)
 Frame = -3

Query: 222 LIELYVSCGSVSVAHKVFDEMPVKDTVSWTAIMSGYVNQGSSNMAMARKFFEEMPVKDLV 43
           +I  YV CG +  A K+FDEMP ++ VS+T ++ GY   G  +MA AR  FEE P +D+V
Sbjct: 226 IISGYVKCGDLRSARKMFDEMPHRNVVSFTTMIDGYAKSG--DMASARFVFEEAPERDVV 283

Query: 42  AWNTMV 25
           AW+ ++
Sbjct: 284 AWSALI 289


>ref|XP_003609609.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355510664|gb|AES91806.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 576

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 39/80 (48%), Positives = 58/80 (72%)
 Frame = -3

Query: 240 VFVATNLIELYVSCGSVSVAHKVFDEMPVKDTVSWTAIMSGYVNQGSSNMAMARKFFEEM 61
           V+V T L++LY   G V  A KVFDEMP K+ VSW +++SGY+  G  N+   ++FF+E+
Sbjct: 139 VYVQTALLDLYCKIGDVVTARKVFDEMPDKNVVSWNSLLSGYIKGG--NLDEGQRFFDEI 196

Query: 60  PVKDLVAWNTMVAGYVKIGE 1
           P+KD+++WN MV+GY K G+
Sbjct: 197 PLKDVISWNCMVSGYAKAGK 216



 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 28/74 (37%), Positives = 45/74 (60%)
 Frame = -3

Query: 225 NLIELYVSCGSVSVAHKVFDEMPVKDTVSWTAIMSGYVNQGSSNMAMARKFFEEMPVKDL 46
           +L+  Y+  G++    + FDE+P+KD +SW  ++SGY   G   M  A   F++MP ++ 
Sbjct: 175 SLLSGYIKGGNLDEGQRFFDEIPLKDVISWNCMVSGYAKAG--KMDRACYLFQQMPERNF 232

Query: 45  VAWNTMVAGYVKIG 4
            +WNTM+ GYV  G
Sbjct: 233 ASWNTMITGYVDCG 246



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 27/71 (38%), Positives = 47/71 (66%)
 Frame = -3

Query: 222 LIELYVSCGSVSVAHKVFDEMPVKDTVSWTAIMSGYVNQGSSNMAMARKFFEEMPVKDLV 43
           +I  YV CGS+  A ++FD MP +++VS   +++GY   G  ++  AR+ F++M  KDL+
Sbjct: 238 MITGYVDCGSIVEARELFDAMPRRNSVSLITMIAGYSKSG--DVHSARELFDQMDDKDLL 295

Query: 42  AWNTMVAGYVK 10
           ++N M+A Y +
Sbjct: 296 SYNAMIACYAQ 306


>gb|AEP33757.1| organelle transcript processing 82, partial [Aethionema
           cordifolium]
          Length = 679

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 41/83 (49%), Positives = 61/83 (73%)
 Frame = -3

Query: 252 LSVDVFVATNLIELYVSCGSVSVAHKVFDEMPVKDTVSWTAIMSGYVNQGSSNMAMARKF 73
           L+VD+ V T+LI +Y   G V  AHKVFD    +D VS+TA+++GY ++G  NM  A+K 
Sbjct: 109 LTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRDVVSYTAMITGYASRG--NMDKAQKM 166

Query: 72  FEEMPVKDLVAWNTMVAGYVKIG 4
           F+E+P+KD+V+WN M++GY +IG
Sbjct: 167 FDEIPIKDVVSWNAMISGYAEIG 189