BLASTX nr result

ID: Coptis21_contig00026827 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00026827
         (214 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273648.2| PREDICTED: LOB domain-containing protein 12-...    92   3e-17
ref|XP_002313968.1| predicted protein [Populus trichocarpa] gi|2...    86   4e-15
ref|XP_004148190.1| PREDICTED: LOB domain-containing protein 12-...    85   7e-15
ref|XP_002520780.1| LOB domain-containing protein, putative [Ric...    85   7e-15
ref|XP_002311246.1| predicted protein [Populus trichocarpa] gi|2...    85   7e-15

>ref|XP_002273648.2| PREDICTED: LOB domain-containing protein 12-like [Vitis vinifera]
          Length = 212

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 42/58 (72%), Positives = 46/58 (79%)
 Frame = -1

Query: 175 PVPSFLQTNFLPSFLRDFQHQNMGGNSPCASCKLLRRRCAKDCIFAPYFPSDDPHKFA 2
           P PSF   + L +FL      +MGGNSPCASCKLLRRRCAKDCIFAPYFPSDDPHKF+
Sbjct: 20  PQPSFSNPSSLLAFLPRSSPSSMGGNSPCASCKLLRRRCAKDCIFAPYFPSDDPHKFS 77


>ref|XP_002313968.1| predicted protein [Populus trichocarpa] gi|222850376|gb|EEE87923.1|
           predicted protein [Populus trichocarpa]
          Length = 120

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 36/38 (94%), Positives = 38/38 (100%)
 Frame = -1

Query: 115 QNMGGNSPCASCKLLRRRCAKDCIFAPYFPSDDPHKFA 2
           +NMGG+SPCASCKLLRRRCAKDCIFAPYFPSDDPHKFA
Sbjct: 1   KNMGGSSPCASCKLLRRRCAKDCIFAPYFPSDDPHKFA 38


>ref|XP_004148190.1| PREDICTED: LOB domain-containing protein 12-like [Cucumis sativus]
           gi|449509217|ref|XP_004163527.1| PREDICTED: LOB
           domain-containing protein 12-like [Cucumis sativus]
          Length = 167

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 36/36 (100%), Positives = 36/36 (100%)
 Frame = -1

Query: 109 MGGNSPCASCKLLRRRCAKDCIFAPYFPSDDPHKFA 2
           MGGNSPCASCKLLRRRCAKDCIFAPYFPSDDPHKFA
Sbjct: 1   MGGNSPCASCKLLRRRCAKDCIFAPYFPSDDPHKFA 36


>ref|XP_002520780.1| LOB domain-containing protein, putative [Ricinus communis]
           gi|223539911|gb|EEF41489.1| LOB domain-containing
           protein, putative [Ricinus communis]
          Length = 173

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 36/36 (100%), Positives = 36/36 (100%)
 Frame = -1

Query: 109 MGGNSPCASCKLLRRRCAKDCIFAPYFPSDDPHKFA 2
           MGGNSPCASCKLLRRRCAKDCIFAPYFPSDDPHKFA
Sbjct: 1   MGGNSPCASCKLLRRRCAKDCIFAPYFPSDDPHKFA 36


>ref|XP_002311246.1| predicted protein [Populus trichocarpa] gi|222851066|gb|EEE88613.1|
           predicted protein [Populus trichocarpa]
          Length = 164

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 36/36 (100%), Positives = 36/36 (100%)
 Frame = -1

Query: 109 MGGNSPCASCKLLRRRCAKDCIFAPYFPSDDPHKFA 2
           MGGNSPCASCKLLRRRCAKDCIFAPYFPSDDPHKFA
Sbjct: 1   MGGNSPCASCKLLRRRCAKDCIFAPYFPSDDPHKFA 36


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