BLASTX nr result

ID: Coptis21_contig00026826 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00026826
         (401 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003518544.1| PREDICTED: ABC transporter C family member 3...   134   1e-31
ref|XP_003617730.1| Multidrug resistance protein ABC transporter...   132   1e-31
ref|XP_003545103.1| PREDICTED: ABC transporter C family member 3...   133   2e-31
ref|XP_003519622.1| PREDICTED: ABC transporter C family member 3...   132   4e-31
ref|XP_002265605.2| PREDICTED: ABC transporter C family member 3...   132   5e-31

>ref|XP_003518544.1| PREDICTED: ABC transporter C family member 3-like [Glycine max]
          Length = 2054

 Score =  134 bits (337), Expect(2) = 1e-31
 Identities = 61/114 (53%), Positives = 86/114 (75%)
 Frame = -1

Query: 344  QYLNGRRVFKNEGYFLVSAFILSEIIECLAERQKTFRFNRVSVRVTAALSGLIYRKC*TL 165
            QYL+G+R+++N+GYFLVSAF  ++++ECL +R   FR  +V +R+ A L  +IY K  TL
Sbjct: 885  QYLDGQRLYENQGYFLVSAFFFAKLVECLTQRHWFFRLQQVGLRIRALLVTMIYNKALTL 944

Query: 164  SIQSRQVHSSGEIANFMNIDAGRIGSFNTFLHDWWKVPIQIVLGLLILYKNVGL 3
            S QS+Q H+SGEI NFM +DA R+G F+ ++HD W V +Q+ L LLILYKN+GL
Sbjct: 945  SCQSKQGHTSGEIINFMTVDAERVGVFSWYMHDLWMVALQVTLALLILYKNLGL 998



 Score = 26.9 bits (58), Expect(2) = 1e-31
 Identities = 11/12 (91%), Positives = 11/12 (91%)
 Frame = -3

Query: 390 TFASYVGPYLID 355
           T ASYVGPYLID
Sbjct: 870 TLASYVGPYLID 881


>ref|XP_003617730.1| Multidrug resistance protein ABC transporter family [Medicago
           truncatula] gi|355519065|gb|AET00689.1| Multidrug
           resistance protein ABC transporter family [Medicago
           truncatula]
          Length = 1521

 Score =  132 bits (331), Expect(2) = 1e-31
 Identities = 61/114 (53%), Positives = 85/114 (74%)
 Frame = -1

Query: 344 QYLNGRRVFKNEGYFLVSAFILSEIIECLAERQKTFRFNRVSVRVTAALSGLIYRKC*TL 165
           QYL+G+R+++N+GY LVSAF  ++++ECL +R   FR  ++ +R  A L  +IY K  TL
Sbjct: 341 QYLDGKRLYENQGYVLVSAFFFAKLVECLTQRHWFFRLQQLGLRTRALLVTMIYSKALTL 400

Query: 164 SIQSRQVHSSGEIANFMNIDAGRIGSFNTFLHDWWKVPIQIVLGLLILYKNVGL 3
           S QSRQ H+SGEI NFM +DA R+GSF+ ++HD W V +Q+ L LLILYKN+GL
Sbjct: 401 SGQSRQCHTSGEIINFMTVDAERVGSFSWYMHDLWLVALQVTLALLILYKNLGL 454



 Score = 29.3 bits (64), Expect(2) = 1e-31
 Identities = 12/12 (100%), Positives = 12/12 (100%)
 Frame = -3

Query: 390 TFASYVGPYLID 355
           TFASYVGPYLID
Sbjct: 326 TFASYVGPYLID 337


>ref|XP_003545103.1| PREDICTED: ABC transporter C family member 3-like [Glycine max]
          Length = 1494

 Score =  133 bits (335), Expect(2) = 2e-31
 Identities = 60/114 (52%), Positives = 86/114 (75%)
 Frame = -1

Query: 344 QYLNGRRVFKNEGYFLVSAFILSEIIECLAERQKTFRFNRVSVRVTAALSGLIYRKC*TL 165
           QYL+G+R+++N+GYFLVSAF  ++++ECL +R   F+  +V +R+ A L  +IY K  TL
Sbjct: 325 QYLDGQRLYENQGYFLVSAFFFAKLVECLTQRHWIFKLQQVGLRIRALLVTMIYNKALTL 384

Query: 164 SIQSRQVHSSGEIANFMNIDAGRIGSFNTFLHDWWKVPIQIVLGLLILYKNVGL 3
           S QS+Q H+SGEI NFM +DA R+G F+ ++HD W V +Q+ L LLILYKN+GL
Sbjct: 385 SCQSKQGHTSGEIINFMTVDAERVGVFSWYMHDLWMVALQVTLALLILYKNLGL 438



 Score = 26.9 bits (58), Expect(2) = 2e-31
 Identities = 11/12 (91%), Positives = 11/12 (91%)
 Frame = -3

Query: 390 TFASYVGPYLID 355
           T ASYVGPYLID
Sbjct: 310 TLASYVGPYLID 321


>ref|XP_003519622.1| PREDICTED: ABC transporter C family member 3-like [Glycine max]
          Length = 1493

 Score =  132 bits (333), Expect(2) = 4e-31
 Identities = 61/114 (53%), Positives = 84/114 (73%)
 Frame = -1

Query: 344 QYLNGRRVFKNEGYFLVSAFILSEIIECLAERQKTFRFNRVSVRVTAALSGLIYRKC*TL 165
           QYL G+R+++N+GYFLVSAF  ++++ECL  R   FR  +V +R+ A L  +IY K  TL
Sbjct: 324 QYLGGQRLYENQGYFLVSAFFFAKLVECLTRRHWFFRLQQVGLRIRALLVTMIYNKALTL 383

Query: 164 SIQSRQVHSSGEIANFMNIDAGRIGSFNTFLHDWWKVPIQIVLGLLILYKNVGL 3
           S QS+Q H+SGEI NFM +DA R+G F+ ++HD W V +Q+ L LLILYKN+GL
Sbjct: 384 SCQSKQGHTSGEIINFMTVDAERVGVFSWYMHDLWMVVLQVTLALLILYKNLGL 437



 Score = 26.9 bits (58), Expect(2) = 4e-31
 Identities = 11/12 (91%), Positives = 11/12 (91%)
 Frame = -3

Query: 390 TFASYVGPYLID 355
           T ASYVGPYLID
Sbjct: 309 TLASYVGPYLID 320


>ref|XP_002265605.2| PREDICTED: ABC transporter C family member 3-like [Vitis vinifera]
          Length = 1485

 Score =  132 bits (331), Expect(2) = 5e-31
 Identities = 62/114 (54%), Positives = 84/114 (73%)
 Frame = -1

Query: 344 QYLNGRRVFKNEGYFLVSAFILSEIIECLAERQKTFRFNRVSVRVTAALSGLIYRKC*TL 165
           QYLNG+R FKNEGYFLVSAF++++++ECL+ R   FR  +V +R+ A L   IY K   +
Sbjct: 326 QYLNGQRQFKNEGYFLVSAFLVAKLVECLSMRHWFFRLQQVGIRMRAVLVTKIYNKVLAV 385

Query: 164 SIQSRQVHSSGEIANFMNIDAGRIGSFNTFLHDWWKVPIQIVLGLLILYKNVGL 3
           S  S+Q H+SGEI NF+++DA RIG F  ++HD W V +Q+ L LLILYKN+GL
Sbjct: 386 SYHSKQCHTSGEIINFISVDAERIGDFGWYMHDPWMVTLQVALALLILYKNLGL 439



 Score = 27.3 bits (59), Expect(2) = 5e-31
 Identities = 11/15 (73%), Positives = 13/15 (86%)
 Frame = -3

Query: 399 IVCTFASYVGPYLID 355
           ++ T ASYVGPYLID
Sbjct: 308 LLYTLASYVGPYLID 322


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