BLASTX nr result

ID: Coptis21_contig00026808 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00026808
         (571 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN77760.1| hypothetical protein VITISV_034908 [Vitis vinifera]   180   1e-43
ref|XP_002275544.2| PREDICTED: F-box protein At5g52880-like [Vit...   180   2e-43
ref|XP_003592172.1| F-box protein [Medicago truncatula] gi|35548...   161   6e-38
ref|XP_003535587.1| PREDICTED: uncharacterized protein LOC100789...   160   2e-37
gb|ACU18198.1| unknown [Glycine max]                                  159   3e-37

>emb|CAN77760.1| hypothetical protein VITISV_034908 [Vitis vinifera]
          Length = 299

 Score =  180 bits (457), Expect = 1e-43
 Identities = 88/138 (63%), Positives = 113/138 (81%)
 Frame = +2

Query: 158 MSEIVKRYEKLKLREHLNQSYYYPFVCKELSFILRSAYSKLPKNLQSILFQDTLSSFRSL 337
           MS  ++RY+KL LR+ L + Y YPFVCKELSFILR AY+KLPKNLQS++FQDTL++FR L
Sbjct: 1   MSTPLERYQKLGLRDSLXRIYQYPFVCKELSFILRGAYNKLPKNLQSLVFQDTLAAFRLL 60

Query: 338 PIVETHHGIEAANLLVQAAESALPKHKKILAVTEFKHAVVACKRRQRAQRHVEGSVEIPQ 517
           P ++T   + AANLL+Q+AE+ LPK K+  AVTEFKHA VACKRR +A++  EG   +PQ
Sbjct: 61  PQMQTQSAVSAANLLLQSAEAVLPKQKRTQAVTEFKHAKVACKRRSKARQEEEGLAHLPQ 120

Query: 518 DVLVHIFSFLDIRSLVAV 571
           DVLVHIFSFLD++SL++V
Sbjct: 121 DVLVHIFSFLDMQSLLSV 138


>ref|XP_002275544.2| PREDICTED: F-box protein At5g52880-like [Vitis vinifera]
           gi|302143746|emb|CBI22607.3| unnamed protein product
           [Vitis vinifera]
          Length = 299

 Score =  180 bits (456), Expect = 2e-43
 Identities = 88/138 (63%), Positives = 113/138 (81%)
 Frame = +2

Query: 158 MSEIVKRYEKLKLREHLNQSYYYPFVCKELSFILRSAYSKLPKNLQSILFQDTLSSFRSL 337
           MS  ++RY+KL LR+ L + Y YPFVCKELSFILR AY+KLPKNLQS++FQDTL++FR L
Sbjct: 1   MSTPLERYQKLGLRDSLPRIYQYPFVCKELSFILRGAYNKLPKNLQSLVFQDTLAAFRLL 60

Query: 338 PIVETHHGIEAANLLVQAAESALPKHKKILAVTEFKHAVVACKRRQRAQRHVEGSVEIPQ 517
           P ++T   + AANLL+Q+AE+ LPK K+  AVTEFKHA VACKRR +A++  EG   +PQ
Sbjct: 61  PQMQTQSAVSAANLLLQSAEAVLPKQKRTQAVTEFKHAKVACKRRSKARQEEEGLAHLPQ 120

Query: 518 DVLVHIFSFLDIRSLVAV 571
           DVLVHIFSFLD++SL++V
Sbjct: 121 DVLVHIFSFLDMQSLLSV 138


>ref|XP_003592172.1| F-box protein [Medicago truncatula] gi|355481220|gb|AES62423.1|
           F-box protein [Medicago truncatula]
          Length = 356

 Score =  161 bits (408), Expect = 6e-38
 Identities = 80/137 (58%), Positives = 106/137 (77%)
 Frame = +2

Query: 158 MSEIVKRYEKLKLREHLNQSYYYPFVCKELSFILRSAYSKLPKNLQSILFQDTLSSFRSL 337
           MS  ++RY+KL L E L +SY YP  CKELSFILR A+ K PKNLQ+I+FQDTLS+FR L
Sbjct: 1   MSTPLERYQKLSLTESLPKSYRYPIACKELSFILREAFHKFPKNLQTIIFQDTLSAFRLL 60

Query: 338 PIVETHHGIEAANLLVQAAESALPKHKKILAVTEFKHAVVACKRRQRAQRHVEGSVEIPQ 517
           P +ET   + A +LL Q+ E+ALPK KK +AVTEFK A++A KRR +A +  +GS+++P+
Sbjct: 61  PQMETQSAVSAVHLLFQSVEAALPKQKKNMAVTEFKQAMIAHKRRSKAHQVEKGSLQLPE 120

Query: 518 DVLVHIFSFLDIRSLVA 568
           D+LV IFS LD+RSLV+
Sbjct: 121 DILVQIFSLLDMRSLVS 137


>ref|XP_003535587.1| PREDICTED: uncharacterized protein LOC100789652 [Glycine max]
          Length = 1045

 Score =  160 bits (404), Expect = 2e-37
 Identities = 79/139 (56%), Positives = 109/139 (78%)
 Frame = +2

Query: 155  KMSEIVKRYEKLKLREHLNQSYYYPFVCKELSFILRSAYSKLPKNLQSILFQDTLSSFRS 334
            +M+  ++RY+KL L E L ++Y YP  C+ELSFILR A+ + PKNLQSI+FQDTLS+FR 
Sbjct: 759  RMTNPLERYQKLGLSESLPKTYRYPIACRELSFILREAFHQFPKNLQSIVFQDTLSAFRL 818

Query: 335  LPIVETHHGIEAANLLVQAAESALPKHKKILAVTEFKHAVVACKRRQRAQRHVEGSVEIP 514
            LP ++T   + A + L+Q+ E+ALPK KK +AVTEFKHA+VA KRR +A +  +GS+ +P
Sbjct: 819  LPEIQTQSAVSAVHFLLQSVEAALPKQKKNVAVTEFKHAMVAHKRRCKAHQVEKGSLPLP 878

Query: 515  QDVLVHIFSFLDIRSLVAV 571
            QD+LV IFSFLD++SLV+V
Sbjct: 879  QDILVLIFSFLDMKSLVSV 897


>gb|ACU18198.1| unknown [Glycine max]
          Length = 286

 Score =  159 bits (402), Expect = 3e-37
 Identities = 79/138 (57%), Positives = 108/138 (78%)
 Frame = +2

Query: 158 MSEIVKRYEKLKLREHLNQSYYYPFVCKELSFILRSAYSKLPKNLQSILFQDTLSSFRSL 337
           M+  ++RY+KL L E L ++Y YP  C+ELSFILR A+ + PKNLQSI+FQDTLS+FR L
Sbjct: 1   MTNPLERYQKLGLSESLPKTYRYPIACRELSFILREAFHQFPKNLQSIVFQDTLSAFRLL 60

Query: 338 PIVETHHGIEAANLLVQAAESALPKHKKILAVTEFKHAVVACKRRQRAQRHVEGSVEIPQ 517
           P ++T   + A + L+Q+ E+ALPK KK +AVTEFKHA+VA KRR +A +  +GS+ +PQ
Sbjct: 61  PEIQTQSAVSAVHFLLQSVEAALPKQKKNVAVTEFKHAMVAHKRRCKAHQVEKGSLPLPQ 120

Query: 518 DVLVHIFSFLDIRSLVAV 571
           D+LV IFSFLD++SLV+V
Sbjct: 121 DILVLIFSFLDMKSLVSV 138


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