BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00026778
         (427 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002884756.1| hypothetical protein ARALYDRAFT_478302 [Arab...   109   3e-22
ref|NP_566357.1| polyubiquitin 8 [Arabidopsis thaliana] gi|75101...   108   3e-22
gb|EIW62509.1| ubiquitin [Trametes versicolor FP-101664 SS1]          103   1e-20
sp|P42739.2|UBIQP_ACECL RecName: Full=Polyubiquitin; Contains: R...   101   7e-20
ref|NP_564675.1| polyubiquitin 12 [Arabidopsis thaliana] gi|1222...   100   9e-20

>ref|XP_002884756.1| hypothetical protein ARALYDRAFT_478302 [Arabidopsis lyrata subsp.
           lyrata] gi|297330596|gb|EFH61015.1| hypothetical protein
           ARALYDRAFT_478302 [Arabidopsis lyrata subsp. lyrata]
          Length = 598

 Score =  109 bits (272), Expect = 3e-22
 Identities = 66/136 (48%), Positives = 85/136 (62%)
 Frame = +2

Query: 14  HDLIYLGEELDNSRTLAAYNIEAGSILYAIFRFGDAMQINVSIEQYKRTINLKVKNWYTI 193
           H LI+ G+ L+  RTLA YNI+ GS LY + RF   MQI V     KR INL+V++W TI
Sbjct: 259 HRLIFAGKPLEGGRTLAHYNIQKGSTLYLVTRFRCGMQIFVKTLTGKR-INLEVESWDTI 317

Query: 194 KNVKNVIESMEGIQAISQRLYIGELKLENYVTVADLNIPRGQTLSLINGMRIFVSSITGK 373
           +NVK +I+  EGIQ   QRL     +L++  T AD  I +  TL L+ GM+IFV    GK
Sbjct: 318 ENVKAMIQDKEGIQPDLQRLIFLGKELKDRCTPADYGIQKESTLHLVLGMQIFVKLFGGK 377

Query: 374 KFKLEVLSSDTTKDVK 421
              LEV+SSDT + VK
Sbjct: 378 IITLEVVSSDTIESVK 393



 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 57/148 (38%), Positives = 77/148 (52%), Gaps = 10/148 (6%)
 Frame = +2

Query: 11  QHDLIYLGEELDNSRTLAAYNIEAGSILYAIFRFGDAMQINVSIEQYK------RTINLK 172
           Q  LI+LG EL++ RTLA Y+I   S L   F     MQI V    +       +TI L+
Sbjct: 406 QQRLIFLGHELEDGRTLADYDIRNESTLRLFFHIPHGMQIFVKTYAFSGETPTCKTITLE 465

Query: 173 VKNWYTIKNVKNVIESMEGIQAISQRLYIGELKLENYVTVADLNIPRGQTLSLI----NG 340
           V++  TI NVK  I+   GI    Q L  G   L    T+ D NI +  T+  +     G
Sbjct: 466 VESSDTIDNVKVKIQHKVGIPLDRQSLIFGGRVLVGTRTLLDYNIQKESTIHQLFLQRGG 525

Query: 341 MRIFVSSITGKKFKLEVLSSDTTKDVKE 424
           M+IF+ ++TGK   LEV +SDT  +VKE
Sbjct: 526 MQIFIKTLTGKTIMLEVENSDTIANVKE 553



 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 56/137 (40%), Positives = 75/137 (54%), Gaps = 9/137 (6%)
 Frame = +2

Query: 38  ELDNSRTLAAYNIEAGSILYAIFRFGDAMQINVSIEQYKRTINLKVKNWYTIKNVKNVIE 217
           +L++  TLA Y+I+  S L+ + R    MQI V     K TI L+V++  TI NVK  I+
Sbjct: 27  DLEDGLTLADYSIQKESTLHLVLRLRGGMQIFVKTLTGK-TITLEVESSDTIDNVKAKIQ 85

Query: 218 SMEGIQAISQRLYIGELKLENYVTVADLNIPRGQTLSLI----NGMRIFVSSITGKKF-- 379
             EGI    QRL     +LE+  T+AD +I +  TL L+     GM+IFV +  GK F  
Sbjct: 86  DKEGIPPDQQRLIFAGKQLEDGHTLADYSIQKESTLHLVLRLRGGMQIFVITFPGKNFTG 145

Query: 380 ---KLEVLSSDTTKDVK 421
               LEV SSDT   VK
Sbjct: 146 ETLTLEVESSDTIDSVK 162



 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 58/146 (39%), Positives = 75/146 (51%), Gaps = 10/146 (6%)
 Frame = +2

Query: 20  LIYLGEEL--DNSRTLAAYNIEAGSILYAIFRFGDAMQINVSIEQYK----RTINLKVKN 181
           L + GEEL   + RTLA Y I+  S L+   R    M I V    Y         L+V++
Sbjct: 178 LSFHGEELFTKDGRTLADYGIQNKSALHLGTRLRGNMYIFVKNLPYNTFTGENFILEVES 237

Query: 182 WYTIKNVKNVIESMEGIQAISQRLYIGELKLENYVTVADLNIPRGQTLSLIN----GMRI 349
             TI NVK  I+  EGI     RL      LE   T+A  NI +G TL L+     GM+I
Sbjct: 238 SDTIDNVKAKIQEKEGIPMDLHRLIFAGKPLEGGRTLAHYNIQKGSTLYLVTRFRCGMQI 297

Query: 350 FVSSITGKKFKLEVLSSDTTKDVKEM 427
           FV ++TGK+  LEV S DT ++VK M
Sbjct: 298 FVKTLTGKRINLEVESWDTIENVKAM 323



 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 55/152 (36%), Positives = 81/152 (53%), Gaps = 15/152 (9%)
 Frame = +2

Query: 11  QHDLIYLGEELDNSRTLAAYNIEAGSILYAIFRFGDAMQINVSIEQYK----RTINLKVK 178
           Q  LI+ G++L++  TLA Y+I+  S L+ + R    MQI V     K     T+ L+V+
Sbjct: 94  QQRLIFAGKQLEDGHTLADYSIQKESTLHLVLRLRGGMQIFVITFPGKNFTGETLTLEVE 153

Query: 179 NWYTIKNVKNVIESMEGIQAISQRL--YIGELKLENYVTVADLNIPRGQTLSLINGMR-- 346
           +  TI +VK  I+  EG++   QRL  +  EL  ++  T+AD  I     L L   +R  
Sbjct: 154 SSDTIDSVKAKIQDREGLRPDHQRLSFHGEELFTKDGRTLADYGIQNKSALHLGTRLRGN 213

Query: 347 --IFVSSI-----TGKKFKLEVLSSDTTKDVK 421
             IFV ++     TG+ F LEV SSDT  +VK
Sbjct: 214 MYIFVKNLPYNTFTGENFILEVESSDTIDNVK 245



 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 42/108 (38%), Positives = 59/108 (54%)
 Frame = +2

Query: 11  QHDLIYLGEELDNSRTLAAYNIEAGSILYAIFRFGDAMQINVSIEQYKRTINLKVKNWYT 190
           +  LI+ G  L  +RTL  YNI+  S ++ +F     MQI +     K TI L+V+N  T
Sbjct: 489 RQSLIFGGRVLVGTRTLLDYNIQKESTIHQLFLQRGGMQIFIKTLTGK-TIMLEVENSDT 547

Query: 191 IKNVKNVIESMEGIQAISQRLYIGELKLENYVTVADLNIPRGQTLSLI 334
           I NVK  I+  EGI  + QRL     +LE+ VT+ D  I +  TL L+
Sbjct: 548 IANVKEKIQVKEGITPVQQRLIFFGKQLEDGVTLGDYCIHKNSTLYLV 595


>ref|NP_566357.1| polyubiquitin 8 [Arabidopsis thaliana]
           gi|75101960|sp|Q39256.1|UBQ8_ARATH RecName:
           Full=Polyubiquitin 8; Contains: RecName:
           Full=Ubiquitin-related 1; Contains: RecName:
           Full=Ubiquitin-related 2; Contains: RecName:
           Full=Ubiquitin-related 3; Contains: RecName:
           Full=Ubiquitin-related 4; Contains: RecName:
           Full=Ubiquitin-related 5; Contains: RecName:
           Full=Ubiquitin-related 6; Contains: RecName:
           Full=Ubiquitin-related 7; Contains: RecName:
           Full=Ubiquitin-related 8; Flags: Precursor
           gi|6681339|gb|AAF23256.1|AC015985_14 polyubiquitin
           (ubq8) [Arabidopsis thaliana]
           gi|6682255|gb|AAF23307.1|AC016661_32 polyubiquitin
           [Arabidopsis thaliana] gi|870794|gb|AAA68879.1|
           polyubiquitin [Arabidopsis thaliana]
           gi|332641292|gb|AEE74813.1| polyubiquitin 8 [Arabidopsis
           thaliana]
          Length = 631

 Score =  108 bits (271), Expect = 3e-22
 Identities = 65/139 (46%), Positives = 91/139 (65%), Gaps = 3/139 (2%)
 Frame = +2

Query: 14  HDLIYLGEELDNSRTLAAYNIEAGSILYAIFRFGDAMQINVSIEQYKRTINLKVKNWYTI 193
           H LI+ G+ L+  RTLA YNI+ GS LY + RF   MQI V     KR INL+V++W TI
Sbjct: 283 HRLIFAGKPLEGGRTLAHYNIQKGSTLYLVTRFRCGMQIFVKTLTRKR-INLEVESWDTI 341

Query: 194 KNVKNVIESMEGIQA---ISQRLYIGELKLENYVTVADLNIPRGQTLSLINGMRIFVSSI 364
           +NVK +++  EGIQ    + + +++G+ +L++  T+AD +I +  TL L+ GM+IFV   
Sbjct: 342 ENVKAMVQDKEGIQPQPNLQRLIFLGK-ELKDGCTLADYSIQKESTLHLVLGMQIFVKLF 400

Query: 365 TGKKFKLEVLSSDTTKDVK 421
            GK   LEVLSSDT K VK
Sbjct: 401 GGKIITLEVLSSDTIKSVK 419



 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 63/146 (43%), Positives = 85/146 (58%), Gaps = 9/146 (6%)
 Frame = +2

Query: 11  QHDLIYLGEELDNSRTLAAYNIEAGSILYAIFRFGDAMQINVSIEQYKRTINLKVKNWYT 190
           Q  LI+ G++L++  TLA YNI+  S L+ + R    MQI V     K TI L+VK+  T
Sbjct: 42  QQRLIFAGKQLEDGLTLADYNIQKESTLHLVLRLRGGMQIFVQTLTGK-TITLEVKSSDT 100

Query: 191 IKNVKNVIESMEGIQAISQRLYIGELKLENYVTVADLNIPRGQTLSLI----NGMRIFVS 358
           I NVK  I+  EGI    QRL     +LE+  T+AD NI +  TL L+     GM+IFVS
Sbjct: 101 IDNVKAKIQDKEGILPRQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLCGGMQIFVS 160

Query: 359 SITGKKF-----KLEVLSSDTTKDVK 421
           + +GK F      L+V SSDT ++VK
Sbjct: 161 TFSGKNFTSDTLTLKVESSDTIENVK 186



 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 57/148 (38%), Positives = 77/148 (52%), Gaps = 10/148 (6%)
 Frame = +2

Query: 11  QHDLIYLGEELDNSRTLAAYNIEAGSILYAIFRFGDAMQINVSIEQYK------RTINLK 172
           Q  L++ G +L + RTL  YNI   S L+  F     MQI V    +       +TI L+
Sbjct: 432 QQILLFRGGQLQDGRTLGDYNIRNESTLHLFFHIRHGMQIFVKTFSFSGETPTCKTITLE 491

Query: 173 VKNWYTIKNVKNVIESMEGIQAISQRLYIGELKLENYVTVADLNIPRGQTLSLI----NG 340
           V++  TI NVK  I+   GI    QRL  G   L    T+ D NI +G T+  +     G
Sbjct: 492 VESSDTIDNVKVKIQHKVGIPLDRQRLIFGGRVLVGSRTLLDYNIQKGSTIHQLFLQRGG 551

Query: 341 MRIFVSSITGKKFKLEVLSSDTTKDVKE 424
           M+IF+ ++TGK   LEV SSDT  +VKE
Sbjct: 552 MQIFIKTLTGKTIILEVESSDTIANVKE 579



 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 63/152 (41%), Positives = 83/152 (54%), Gaps = 15/152 (9%)
 Frame = +2

Query: 11  QHDLIYLGEELDNSRTLAAYNIEAGSILYAIFRFGDAMQINVSIEQYKR----TINLKVK 178
           Q  LI+ G++L++ RTLA YNI+  S L+ + R    MQI VS    K     T+ LKV+
Sbjct: 118 QQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLCGGMQIFVSTFSGKNFTSDTLTLKVE 177

Query: 179 NWYTIKNVKNVIESMEGIQAISQRLYI--GELKLENYVTVADLNIPRGQTLSLI----NG 340
           +  TI+NVK  I+  EG++   QRL     EL  E+  T+AD  I    TL L       
Sbjct: 178 SSDTIENVKAKIQDREGLRPDHQRLIFHGEELFTEDNRTLADYGIRNRSTLCLALRLRGD 237

Query: 341 MRIFV-----SSITGKKFKLEVLSSDTTKDVK 421
           M IFV     +S TG+ F LEV SSDT  +VK
Sbjct: 238 MYIFVKNLPYNSFTGENFILEVESSDTIDNVK 269



 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 42/94 (44%), Positives = 58/94 (61%), Gaps = 4/94 (4%)
 Frame = +2

Query: 152 KRTINLKVKNWYTIKNVKNVIESMEGIQAISQRLYIGELKLENYVTVADLNIPRGQTLSL 331
           ++TI L V+   +I NVK  I++ EGI    QRL     +LE+ +T+AD NI +  TL L
Sbjct: 12  EKTITLDVETSDSIHNVKAKIQNKEGIPLDQQRLIFAGKQLEDGLTLADYNIQKESTLHL 71

Query: 332 I----NGMRIFVSSITGKKFKLEVLSSDTTKDVK 421
           +     GM+IFV ++TGK   LEV SSDT  +VK
Sbjct: 72  VLRLRGGMQIFVQTLTGKTITLEVKSSDTIDNVK 105



 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 56/146 (38%), Positives = 74/146 (50%), Gaps = 10/146 (6%)
 Frame = +2

Query: 20  LIYLGEEL--DNSRTLAAYNIEAGSILYAIFRFGDAMQINVSIEQYK----RTINLKVKN 181
           LI+ GEEL  +++RTLA Y I   S L    R    M I V    Y         L+V++
Sbjct: 202 LIFHGEELFTEDNRTLADYGIRNRSTLCLALRLRGDMYIFVKNLPYNSFTGENFILEVES 261

Query: 182 WYTIKNVKNVIESMEGIQAISQRLYIGELKLENYVTVADLNIPRGQTLSLIN----GMRI 349
             TI NVK  ++  E I     RL      LE   T+A  NI +G TL L+     GM+I
Sbjct: 262 SDTIDNVKAKLQDKERIPMDLHRLIFAGKPLEGGRTLAHYNIQKGSTLYLVTRFRCGMQI 321

Query: 350 FVSSITGKKFKLEVLSSDTTKDVKEM 427
           FV ++T K+  LEV S DT ++VK M
Sbjct: 322 FVKTLTRKRINLEVESWDTIENVKAM 347



 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 43/109 (39%), Positives = 61/109 (55%)
 Frame = +2

Query: 20  LIYLGEELDNSRTLAAYNIEAGSILYAIFRFGDAMQINVSIEQYKRTINLKVKNWYTIKN 199
           LI+ G  L  SRTL  YNI+ GS ++ +F     MQI +     K TI L+V++  TI N
Sbjct: 518 LIFGGRVLVGSRTLLDYNIQKGSTIHQLFLQRGGMQIFIKTLTGK-TIILEVESSDTIAN 576

Query: 200 VKNVIESMEGIQAISQRLYIGELKLENYVTVADLNIPRGQTLSLINGMR 346
           VK  I+  EGI+   Q L     +LE+ VT+ D +I +  TL L+  +R
Sbjct: 577 VKEKIQVKEGIKPDQQMLIFFGQQLEDGVTLGDYDIHKKSTLYLVLRLR 625


>gb|EIW62509.1| ubiquitin [Trametes versicolor FP-101664 SS1]
          Length = 397

 Score =  103 bits (257), Expect = 1e-20
 Identities = 60/139 (43%), Positives = 87/139 (62%)
 Frame = +2

Query: 8   SQHDLIYLGEELDNSRTLAAYNIEAGSILYAIFRFGDAMQINVSIEQYKRTINLKVKNWY 187
           +Q  LI+ G++LD+ RT++ YN+  GS ++ +FR  D MQI V     K TI L+VK   
Sbjct: 40  NQQRLIFAGKQLDSHRTVSDYNLRKGSTVFLMFRVLDGMQIFVKTLSGK-TITLEVKPLD 98

Query: 188 TIKNVKNVIESMEGIQAISQRLYIGELKLENYVTVADLNIPRGQTLSLINGMRIFVSSIT 367
           TI+N+K  I++ EG     QR+   E +LE+  T++D NI    TL L+   +IFV ++ 
Sbjct: 99  TIRNIKAKIQAKEGNPPDQQRIKFAEEQLEDDRTLSDYNIQWNSTLQLVGRFQIFVKTVA 158

Query: 368 GKKFKLEVLSSDTTKDVKE 424
           G+   LEV+SSDT KDVKE
Sbjct: 159 GETTPLEVVSSDTIKDVKE 177



 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 40/104 (38%), Positives = 64/104 (61%), Gaps = 4/104 (3%)
 Frame = +2

Query: 122 MQINVSIEQYKRTINLKVKNWYTIKNVKNVIESMEGIQAISQRLYIGELKLENYVTVADL 301
           MQI+V      +TI L+V +  TI+NVK +I   EG+    QRL     +L+++ TV+D 
Sbjct: 1   MQISVKNPTTGKTITLEVDSSDTIENVKAMIHDKEGVAPNQQRLIFAGKQLDSHRTVSDY 60

Query: 302 NIPRGQTLSL----INGMRIFVSSITGKKFKLEVLSSDTTKDVK 421
           N+ +G T+ L    ++GM+IFV +++GK   LEV   DT +++K
Sbjct: 61  NLRKGSTVFLMFRVLDGMQIFVKTLSGKTITLEVKPLDTIRNIK 104



 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 51/141 (36%), Positives = 73/141 (51%), Gaps = 3/141 (2%)
 Frame = +2

Query: 11  QHDLIYLGEELDNSRTLAAYNIEAGSILYAIFRFGDAMQINVSIEQYKRTINLKVKNWYT 190
           Q  + +  E+L++ RTL+ YNI+  S L  + RF    QI V     + T  L+V +  T
Sbjct: 117 QQRIKFAEEQLEDDRTLSDYNIQWNSTLQLVGRF----QIFVKTVAGETT-PLEVVSSDT 171

Query: 191 IKNVKNVIESMEGIQAISQRLYIGELKLENYVTVADLNIPRGQTLSLI---NGMRIFVSS 361
           IK+VK      EG     QRL     +LE+   ++D  I +  T+ L+    GM+IFV S
Sbjct: 172 IKDVKEKYRDKEGAVPAQQRLIFAGKELEDDCILSDYGIQKDSTVHLVLRLPGMQIFVKS 231

Query: 362 ITGKKFKLEVLSSDTTKDVKE 424
            TGK   +E  SSDT   V+E
Sbjct: 232 YTGKTITIEAKSSDTIGCVRE 252


>sp|P42739.2|UBIQP_ACECL RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
           Contains: RecName: Full=Ubiquitin-related 1; Contains:
           RecName: Full=Ubiquitin-related 2; Flags: Precursor
           gi|433970|emb|CAA82268.1| polyubiquitin [Acetabularia
           peniculus]
          Length = 423

 Score =  101 bits (251), Expect = 7e-20
 Identities = 62/141 (43%), Positives = 88/141 (62%), Gaps = 4/141 (2%)
 Frame = +2

Query: 11  QHDLIYLGEELDNSRTLAAYNIEAGSILYAIFRFGDAMQINVSIEQYKRTINLKVKNWYT 190
           Q  LI+ G++L++ RTLA YNI+  S L+ + R    MQI V     K TI L+V++  T
Sbjct: 5   QQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGK-TITLEVQSSDT 63

Query: 191 IKNVKNVIESMEGIQAISQRLYIGELKLENYVTVADLNIPRGQTLSLI----NGMRIFVS 358
           ++NVK+ I+  EGI    QRL     +LE+ +T+AD NI +  TL L+     GM+IFV 
Sbjct: 64  VENVKSKIQDKEGIPPDQQRLIFAGKQLEDGLTLADYNIQKESTLHLVLRLRGGMQIFVK 123

Query: 359 SITGKKFKLEVLSSDTTKDVK 421
           ++TGK   LEV SSDT ++VK
Sbjct: 124 TLTGKTITLEVESSDTVENVK 144



 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 62/141 (43%), Positives = 87/141 (61%), Gaps = 4/141 (2%)
 Frame = +2

Query: 11  QHDLIYLGEELDNSRTLAAYNIEAGSILYAIFRFGDAMQINVSIEQYKRTINLKVKNWYT 190
           Q  LI+ G++L++ RTLA YNI+  S L+ + R    MQI V     K TI L+V++  T
Sbjct: 157 QQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGK-TITLEVESSDT 215

Query: 191 IKNVKNVIESMEGIQAISQRLYIGELKLENYVTVADLNIPRGQTLSLI----NGMRIFVS 358
           ++NVK+ I+  EGI    QRL     +LE+  T+AD NI +  TL L+     GM+IFV 
Sbjct: 216 VENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVK 275

Query: 359 SITGKKFKLEVLSSDTTKDVK 421
           ++TGK   LEV SSDT ++VK
Sbjct: 276 TLTGKTITLEVESSDTVENVK 296



 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 62/141 (43%), Positives = 87/141 (61%), Gaps = 4/141 (2%)
 Frame = +2

Query: 11  QHDLIYLGEELDNSRTLAAYNIEAGSILYAIFRFGDAMQINVSIEQYKRTINLKVKNWYT 190
           Q  LI+ G++L++ RTLA YNI+  S L+ + R    MQI V     K TI L+V++  T
Sbjct: 233 QQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGK-TITLEVESSDT 291

Query: 191 IKNVKNVIESMEGIQAISQRLYIGELKLENYVTVADLNIPRGQTLSLI----NGMRIFVS 358
           ++NVK+ I+  EGI    QRL     +LE+  T+AD NI +  TL L+     GM+IFV 
Sbjct: 292 VENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVK 351

Query: 359 SITGKKFKLEVLSSDTTKDVK 421
           ++TGK   LEV SSDT ++VK
Sbjct: 352 TLTGKTITLEVESSDTVENVK 372



 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 61/141 (43%), Positives = 86/141 (60%), Gaps = 4/141 (2%)
 Frame = +2

Query: 11  QHDLIYLGEELDNSRTLAAYNIEAGSILYAIFRFGDAMQINVSIEQYKRTINLKVKNWYT 190
           Q  LI+ G++L++  TLA YNI+  S L+ + R    MQI V     K TI L+V++  T
Sbjct: 81  QQRLIFAGKQLEDGLTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGK-TITLEVESSDT 139

Query: 191 IKNVKNVIESMEGIQAISQRLYIGELKLENYVTVADLNIPRGQTLSLI----NGMRIFVS 358
           ++NVK+ I+  EGI    QRL     +LE+  T+AD NI +  TL L+     GM+IFV 
Sbjct: 140 VENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVK 199

Query: 359 SITGKKFKLEVLSSDTTKDVK 421
           ++TGK   LEV SSDT ++VK
Sbjct: 200 TLTGKTITLEVESSDTVENVK 220



 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 45/112 (40%), Positives = 67/112 (59%)
 Frame = +2

Query: 11  QHDLIYLGEELDNSRTLAAYNIEAGSILYAIFRFGDAMQINVSIEQYKRTINLKVKNWYT 190
           Q  LI+ G++L++ RTLA YNI+  S L+ + R    MQI V     K TI L+V++  T
Sbjct: 309 QQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGK-TITLEVESSDT 367

Query: 191 IKNVKNVIESMEGIQAISQRLYIGELKLENYVTVADLNIPRGQTLSLINGMR 346
           ++NVK+ I+  EGI    QR+     +LE+  T+AD NI +  TL L+  +R
Sbjct: 368 VENVKSKIQDKEGIPPDQQRIIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 419


>ref|NP_564675.1| polyubiquitin 12 [Arabidopsis thaliana]
           gi|122213849|sp|Q3E7K8.1|UBQ12_ARATH RecName:
           Full=Polyubiquitin 12; Contains: RecName:
           Full=Ubiquitin-related 1; Contains: RecName:
           Full=Ubiquitin-related 2; Contains: RecName:
           Full=Ubiquitin-related 3; Flags: Precursor
           gi|332195060|gb|AEE33181.1| polyubiquitin 12
           [Arabidopsis thaliana]
          Length = 230

 Score =  100 bits (250), Expect = 9e-20
 Identities = 63/141 (44%), Positives = 86/141 (60%), Gaps = 4/141 (2%)
 Frame = +2

Query: 11  QHDLIYLGEELDNSRTLAAYNIEAGSILYAIFRFGDAMQINVSIEQYKRTINLKVKNWYT 190
           QH LI+ G++L++ RTLA YN++  S L+ + RF   MQI V     K TI L+V++  T
Sbjct: 40  QHRLIFAGKQLEDGRTLADYNVQEDSTLHLLLRFRGGMQIFVKTLTGK-TITLEVESSDT 98

Query: 191 IKNVKNVIESMEGIQAISQRLYIGELKLENYVTVADLNIPRGQTLSLI----NGMRIFVS 358
           I N+K  I+  EGI    QRL     +LE+  T+AD NI +  TL L+     GM+IFV 
Sbjct: 99  IDNLKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVK 158

Query: 359 SITGKKFKLEVLSSDTTKDVK 421
           ++TGK   LEV SSDT  +VK
Sbjct: 159 TLTGKTITLEVESSDTIDNVK 179



 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 46/112 (41%), Positives = 64/112 (57%)
 Frame = +2

Query: 11  QHDLIYLGEELDNSRTLAAYNIEAGSILYAIFRFGDAMQINVSIEQYKRTINLKVKNWYT 190
           Q  LI+ G++L++ RTLA YNI+  S L+ + R    MQI V     K TI L+V++  T
Sbjct: 116 QQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGK-TITLEVESSDT 174

Query: 191 IKNVKNVIESMEGIQAISQRLYIGELKLENYVTVADLNIPRGQTLSLINGMR 346
           I NVK  I+  EGI    QRL     + E+  T+AD NI +  TL L+  +R
Sbjct: 175 IDNVKAKIQDKEGISPDQQRLIFAGKQHEDGRTLADYNIQKESTLHLVLRLR 226



 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 39/93 (41%), Positives = 55/93 (59%), Gaps = 4/93 (4%)
 Frame = +2

Query: 155 RTINLKVKNWYTIKNVKNVIESMEGIQAISQRLYIGELKLENYVTVADLNIPRGQTLSLI 334
           +T  L+V++  TI NVK  I+ +EGI     RL     +LE+  T+AD N+    TL L+
Sbjct: 11  KTKVLEVESSDTIDNVKAKIQDIEGIPPDQHRLIFAGKQLEDGRTLADYNVQEDSTLHLL 70

Query: 335 ----NGMRIFVSSITGKKFKLEVLSSDTTKDVK 421
                GM+IFV ++TGK   LEV SSDT  ++K
Sbjct: 71  LRFRGGMQIFVKTLTGKTITLEVESSDTIDNLK 103