BLASTX nr result

ID: Coptis21_contig00026766 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00026766
         (1646 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278526.1| PREDICTED: uncharacterized protein LOC100249...   249   2e-63
ref|XP_002311628.1| predicted protein [Populus trichocarpa] gi|2...   245   3e-62
ref|XP_003538642.1| PREDICTED: uncharacterized protein LOC100802...   241   5e-61
ref|XP_004141580.1| PREDICTED: uncharacterized protein LOC101213...   229   2e-57
ref|XP_002883368.1| structural constituent of ribosome [Arabidop...   223   1e-55

>ref|XP_002278526.1| PREDICTED: uncharacterized protein LOC100249372 [Vitis vinifera]
            gi|297737055|emb|CBI26256.3| unnamed protein product
            [Vitis vinifera]
          Length = 348

 Score =  249 bits (636), Expect = 2e-63
 Identities = 142/263 (53%), Positives = 161/263 (61%), Gaps = 6/263 (2%)
 Frame = -3

Query: 1209 PSLLQPSRAQLKDINIELVDHDSWKVSSGLSEAWRQQMNGSFERKSKVVXXXXXXXXXXX 1030
            PSL           +IELVD D+W+VSSGL++AWR   +G    K  V            
Sbjct: 64   PSLYSHGGLYPDGYDIELVDPDTWRVSSGLAQAWRDGPSGRRVVKGAV----DEQIHESP 119

Query: 1029 XXXXXXEFDDIEDMRFRGKLFYKLDRDSREFEEYNLDLXXXXXXXXXXXXXXXXXXKVNL 850
                  +FD+IEDMR  G LFYKLDRDS+EFEEYNLD                       
Sbjct: 120  SFEADLDFDEIEDMRIYGSLFYKLDRDSKEFEEYNLDFHRKKSSKNKGDKKESKKENPTQ 179

Query: 849  XXXXXXXXXXXXXXXXPRE------GMDTSSVGKTERTPTFNQLTAPYHEPFCLDIFITK 688
                             ++      G D+S V K  RTPTFNQLTAPYHEPFCLDIFI+K
Sbjct: 180  NSPNSEKLPKLPKVVKSKDHIFLLDGRDSSLVEKKLRTPTFNQLTAPYHEPFCLDIFISK 239

Query: 687  SSVRACIVHRATSNVVVVAHSISKDMKFDLKSTKDDNACAAVGGILAQRALADDIHDIVY 508
             SVRACI+HR TS VV VAHSISKDMKFDL ST++  ACAAVG ILAQRALADDIHD VY
Sbjct: 240  GSVRACIIHRVTSKVVAVAHSISKDMKFDLTSTRNVTACAAVGRILAQRALADDIHDTVY 299

Query: 507  TPRKGDKVEGKLQIVLQSLIDHG 439
            TPRKGDK+EGKLQIVLQS+ID+G
Sbjct: 300  TPRKGDKLEGKLQIVLQSIIDNG 322


>ref|XP_002311628.1| predicted protein [Populus trichocarpa] gi|222851448|gb|EEE88995.1|
            predicted protein [Populus trichocarpa]
          Length = 356

 Score =  245 bits (625), Expect = 3e-62
 Identities = 146/305 (47%), Positives = 179/305 (58%), Gaps = 19/305 (6%)
 Frame = -3

Query: 1296 RVCSFCSNAPRLVD-VDEASKPPSRMGMG--------FPSLLQPSRAQLKDINIELVDHD 1144
            RV SFCS A   +D  +E ++  S             F  LL  SR  L   NIELVD D
Sbjct: 23   RVSSFCSKASTTIDKANETTEQASLQERSTSYSSKIHFSPLLGDSRPNLDGYNIELVDDD 82

Query: 1143 SWKVSSGLSEAWRQQMNGSFERKSKVVXXXXXXXXXXXXXXXXXEFDDIEDMRFRGKLFY 964
            +W+VSS L  AWR  ++   E KS V+                 +FD+I++MR RG LFY
Sbjct: 83   AWQVSSSLVHAWRG-LDREKEAKS-VIEAFGEQFDDVKSLQGNPDFDEIDNMRIRGNLFY 140

Query: 963  KLDRDSREFEEYNLDLXXXXXXXXXXXXXXXXXXKVNLXXXXXXXXXXXXXXXXPR---- 796
            KLDRDS+EFEEY+ D                   + +                       
Sbjct: 141  KLDRDSKEFEEYSFDFHRKNSWRRKDDPKGNEKKESSKKNESSKESKRKENRSCNSAFDV 200

Query: 795  ----EGMDTSSVGKTE--RTPTFNQLTAPYHEPFCLDIFITKSSVRACIVHRATSNVVVV 634
                  MD+S   + +  RTPTFNQLT PYHEPFCLDI+I+K+SVRAC++HR TS VV V
Sbjct: 201  YTLVSNMDSSGGAEKKKIRTPTFNQLTGPYHEPFCLDIYISKASVRACVIHRVTSKVVAV 260

Query: 633  AHSISKDMKFDLKSTKDDNACAAVGGILAQRALADDIHDIVYTPRKGDKVEGKLQIVLQS 454
            AHSISKD KFDL STK+  ACAAVGGILAQRALADDIHD+VYTPRKG+++EGKLQIVLQ+
Sbjct: 261  AHSISKDFKFDLASTKNATACAAVGGILAQRALADDIHDVVYTPRKGERLEGKLQIVLQA 320

Query: 453  LIDHG 439
            +ID+G
Sbjct: 321  IIDNG 325


>ref|XP_003538642.1| PREDICTED: uncharacterized protein LOC100802391 [Glycine max]
          Length = 329

 Score =  241 bits (614), Expect = 5e-61
 Identities = 139/284 (48%), Positives = 167/284 (58%), Gaps = 11/284 (3%)
 Frame = -3

Query: 1257 DVDEASKPPSRMGMG------FPSLLQPSRAQLKDINIELVDHDSWKVSSGLSEAWRQQM 1096
            DV+ A+  PS           F     PS       +IELVDHD+W VSSG+++AWR+  
Sbjct: 36   DVEAAASLPSEYSTSPHLSPFFSDFNHPSTG----FDIELVDHDAWAVSSGVAQAWREPA 91

Query: 1095 NGSFERKSKVVXXXXXXXXXXXXXXXXXEFDDIEDMRFRGKLFYKLDRDSREFEEYNLDL 916
            +    R +                    +F+DI++MR RG LFYKL+R S+EFEEYNLD 
Sbjct: 92   S----RATTSFGPQVTGEALDDHVEGELDFEDIDNMRVRGNLFYKLERSSKEFEEYNLDF 147

Query: 915  XXXXXXXXXXXXXXXXXXKV-----NLXXXXXXXXXXXXXXXXPREGMDTSSVGKTERTP 751
                                     +                   +  D S+V K +RTP
Sbjct: 148  HRKKSSKRKEEVNKAKTTPNVVSKDHKLPKVDELTRSKSVVPRVDDINDGSTVNKRQRTP 207

Query: 750  TFNQLTAPYHEPFCLDIFITKSSVRACIVHRATSNVVVVAHSISKDMKFDLKSTKDDNAC 571
            TFNQLT PYHEPFCLDIFI+K+SVRAC+VHR TS VV VAHSISKD KFDL STK+   C
Sbjct: 208  TFNQLTGPYHEPFCLDIFISKASVRACVVHRVTSKVVAVAHSISKDFKFDLASTKNKTTC 267

Query: 570  AAVGGILAQRALADDIHDIVYTPRKGDKVEGKLQIVLQSLIDHG 439
            AAVG ILAQRALADDIHDIVYTPRKG++VEGKLQIVLQS+ID+G
Sbjct: 268  AAVGAILAQRALADDIHDIVYTPRKGERVEGKLQIVLQSIIDNG 311


>ref|XP_004141580.1| PREDICTED: uncharacterized protein LOC101213193 [Cucumis sativus]
            gi|449481530|ref|XP_004156210.1| PREDICTED:
            uncharacterized LOC101213193 [Cucumis sativus]
          Length = 334

 Score =  229 bits (583), Expect = 2e-57
 Identities = 126/250 (50%), Positives = 155/250 (62%), Gaps = 7/250 (2%)
 Frame = -3

Query: 1167 NIELVDHDSWKVSSGLSEAWRQQMNG--SFERKSKVVXXXXXXXXXXXXXXXXXEFDDIE 994
            ++ELVD D+W VS GL+ AW  +  G   FE +  +                  +FDDI+
Sbjct: 68   DVELVDDDTWAVSCGLARAWEAREKGWSGFENRYSL-----EDEAHDPVDYCDSDFDDID 122

Query: 993  DMRFRGKLFYKLDRDSREFEEYNLDLXXXXXXXXXXXXXXXXXXKVNLXXXXXXXXXXXX 814
            +MR RG LFYKLD+ S+EFEE +LD                   KVN             
Sbjct: 123  NMRIRGNLFYKLDQASKEFEECSLDFHRKKKSLKEKEDMVKRRSKVNDKLDKCLASGQVK 182

Query: 813  XXXXPREGM-----DTSSVGKTERTPTFNQLTAPYHEPFCLDIFITKSSVRACIVHRATS 649
                 +        +   V K  RTPTFNQLT+PYHEPFCLDIFI+K+SVRACI+HR TS
Sbjct: 183  LPEHLKNKYVIVERENDDVEKKLRTPTFNQLTSPYHEPFCLDIFISKASVRACIIHRVTS 242

Query: 648  NVVVVAHSISKDMKFDLKSTKDDNACAAVGGILAQRALADDIHDIVYTPRKGDKVEGKLQ 469
             VV VAHSISKDMKFDL S KD +ACAAVG +LAQRAL DDIH+++YTPRKG+++EGKLQ
Sbjct: 243  KVVAVAHSISKDMKFDLTSRKDSSACAAVGAVLAQRALGDDIHNLIYTPRKGERIEGKLQ 302

Query: 468  IVLQSLIDHG 439
            IVLQS+ID+G
Sbjct: 303  IVLQSVIDNG 312


>ref|XP_002883368.1| structural constituent of ribosome [Arabidopsis lyrata subsp. lyrata]
            gi|297329208|gb|EFH59627.1| structural constituent of
            ribosome [Arabidopsis lyrata subsp. lyrata]
          Length = 311

 Score =  223 bits (568), Expect = 1e-55
 Identities = 123/252 (48%), Positives = 148/252 (58%), Gaps = 3/252 (1%)
 Frame = -3

Query: 1185 AQLKDINIELVDHDSWKVSSGLSEAWRQQMNGSFERKSKVVXXXXXXXXXXXXXXXXXEF 1006
            A L    IE VD D+W VSS LS+AWRQ    + +     +                   
Sbjct: 42   AGLSGCGIETVDDDAWHVSSSLSQAWRQFQADTAKNSPVTIQGVRETMLDDEDPDH---- 97

Query: 1005 DDIEDMRFRGKLFYKLDRDSREFEEYNLDLXXXXXXXXXXXXXXXXXXKV---NLXXXXX 835
            D+I++MR RG LFYKLDR S+EFEEYN D                        N      
Sbjct: 98   DEIDNMRIRGDLFYKLDRGSKEFEEYNYDFHRKNQHKNVKREQNQEEETTMKKNNKKEVR 157

Query: 834  XXXXXXXXXXXPREGMDTSSVGKTERTPTFNQLTAPYHEPFCLDIFITKSSVRACIVHRA 655
                              ++V K ERT TFNQLTAP+H PFCLDI+I+K SVRAC++HR 
Sbjct: 158  EEYKKRNDSFTGETDHPNAAVRKRERTFTFNQLTAPFHYPFCLDIYISKESVRACVIHRV 217

Query: 654  TSNVVVVAHSISKDMKFDLKSTKDDNACAAVGGILAQRALADDIHDIVYTPRKGDKVEGK 475
            TS VV VAHSISKDMKFDL ST++  ACAAVG +LAQR L DDIHD++YTPRKGDK+EGK
Sbjct: 218  TSKVVTVAHSISKDMKFDLGSTRNAAACAAVGAVLAQRCLEDDIHDVIYTPRKGDKIEGK 277

Query: 474  LQIVLQSLIDHG 439
            LQ+VLQ+LID+G
Sbjct: 278  LQVVLQALIDNG 289


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