BLASTX nr result
ID: Coptis21_contig00026766
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00026766 (1646 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002278526.1| PREDICTED: uncharacterized protein LOC100249... 249 2e-63 ref|XP_002311628.1| predicted protein [Populus trichocarpa] gi|2... 245 3e-62 ref|XP_003538642.1| PREDICTED: uncharacterized protein LOC100802... 241 5e-61 ref|XP_004141580.1| PREDICTED: uncharacterized protein LOC101213... 229 2e-57 ref|XP_002883368.1| structural constituent of ribosome [Arabidop... 223 1e-55 >ref|XP_002278526.1| PREDICTED: uncharacterized protein LOC100249372 [Vitis vinifera] gi|297737055|emb|CBI26256.3| unnamed protein product [Vitis vinifera] Length = 348 Score = 249 bits (636), Expect = 2e-63 Identities = 142/263 (53%), Positives = 161/263 (61%), Gaps = 6/263 (2%) Frame = -3 Query: 1209 PSLLQPSRAQLKDINIELVDHDSWKVSSGLSEAWRQQMNGSFERKSKVVXXXXXXXXXXX 1030 PSL +IELVD D+W+VSSGL++AWR +G K V Sbjct: 64 PSLYSHGGLYPDGYDIELVDPDTWRVSSGLAQAWRDGPSGRRVVKGAV----DEQIHESP 119 Query: 1029 XXXXXXEFDDIEDMRFRGKLFYKLDRDSREFEEYNLDLXXXXXXXXXXXXXXXXXXKVNL 850 +FD+IEDMR G LFYKLDRDS+EFEEYNLD Sbjct: 120 SFEADLDFDEIEDMRIYGSLFYKLDRDSKEFEEYNLDFHRKKSSKNKGDKKESKKENPTQ 179 Query: 849 XXXXXXXXXXXXXXXXPRE------GMDTSSVGKTERTPTFNQLTAPYHEPFCLDIFITK 688 ++ G D+S V K RTPTFNQLTAPYHEPFCLDIFI+K Sbjct: 180 NSPNSEKLPKLPKVVKSKDHIFLLDGRDSSLVEKKLRTPTFNQLTAPYHEPFCLDIFISK 239 Query: 687 SSVRACIVHRATSNVVVVAHSISKDMKFDLKSTKDDNACAAVGGILAQRALADDIHDIVY 508 SVRACI+HR TS VV VAHSISKDMKFDL ST++ ACAAVG ILAQRALADDIHD VY Sbjct: 240 GSVRACIIHRVTSKVVAVAHSISKDMKFDLTSTRNVTACAAVGRILAQRALADDIHDTVY 299 Query: 507 TPRKGDKVEGKLQIVLQSLIDHG 439 TPRKGDK+EGKLQIVLQS+ID+G Sbjct: 300 TPRKGDKLEGKLQIVLQSIIDNG 322 >ref|XP_002311628.1| predicted protein [Populus trichocarpa] gi|222851448|gb|EEE88995.1| predicted protein [Populus trichocarpa] Length = 356 Score = 245 bits (625), Expect = 3e-62 Identities = 146/305 (47%), Positives = 179/305 (58%), Gaps = 19/305 (6%) Frame = -3 Query: 1296 RVCSFCSNAPRLVD-VDEASKPPSRMGMG--------FPSLLQPSRAQLKDINIELVDHD 1144 RV SFCS A +D +E ++ S F LL SR L NIELVD D Sbjct: 23 RVSSFCSKASTTIDKANETTEQASLQERSTSYSSKIHFSPLLGDSRPNLDGYNIELVDDD 82 Query: 1143 SWKVSSGLSEAWRQQMNGSFERKSKVVXXXXXXXXXXXXXXXXXEFDDIEDMRFRGKLFY 964 +W+VSS L AWR ++ E KS V+ +FD+I++MR RG LFY Sbjct: 83 AWQVSSSLVHAWRG-LDREKEAKS-VIEAFGEQFDDVKSLQGNPDFDEIDNMRIRGNLFY 140 Query: 963 KLDRDSREFEEYNLDLXXXXXXXXXXXXXXXXXXKVNLXXXXXXXXXXXXXXXXPR---- 796 KLDRDS+EFEEY+ D + + Sbjct: 141 KLDRDSKEFEEYSFDFHRKNSWRRKDDPKGNEKKESSKKNESSKESKRKENRSCNSAFDV 200 Query: 795 ----EGMDTSSVGKTE--RTPTFNQLTAPYHEPFCLDIFITKSSVRACIVHRATSNVVVV 634 MD+S + + RTPTFNQLT PYHEPFCLDI+I+K+SVRAC++HR TS VV V Sbjct: 201 YTLVSNMDSSGGAEKKKIRTPTFNQLTGPYHEPFCLDIYISKASVRACVIHRVTSKVVAV 260 Query: 633 AHSISKDMKFDLKSTKDDNACAAVGGILAQRALADDIHDIVYTPRKGDKVEGKLQIVLQS 454 AHSISKD KFDL STK+ ACAAVGGILAQRALADDIHD+VYTPRKG+++EGKLQIVLQ+ Sbjct: 261 AHSISKDFKFDLASTKNATACAAVGGILAQRALADDIHDVVYTPRKGERLEGKLQIVLQA 320 Query: 453 LIDHG 439 +ID+G Sbjct: 321 IIDNG 325 >ref|XP_003538642.1| PREDICTED: uncharacterized protein LOC100802391 [Glycine max] Length = 329 Score = 241 bits (614), Expect = 5e-61 Identities = 139/284 (48%), Positives = 167/284 (58%), Gaps = 11/284 (3%) Frame = -3 Query: 1257 DVDEASKPPSRMGMG------FPSLLQPSRAQLKDINIELVDHDSWKVSSGLSEAWRQQM 1096 DV+ A+ PS F PS +IELVDHD+W VSSG+++AWR+ Sbjct: 36 DVEAAASLPSEYSTSPHLSPFFSDFNHPSTG----FDIELVDHDAWAVSSGVAQAWREPA 91 Query: 1095 NGSFERKSKVVXXXXXXXXXXXXXXXXXEFDDIEDMRFRGKLFYKLDRDSREFEEYNLDL 916 + R + +F+DI++MR RG LFYKL+R S+EFEEYNLD Sbjct: 92 S----RATTSFGPQVTGEALDDHVEGELDFEDIDNMRVRGNLFYKLERSSKEFEEYNLDF 147 Query: 915 XXXXXXXXXXXXXXXXXXKV-----NLXXXXXXXXXXXXXXXXPREGMDTSSVGKTERTP 751 + + D S+V K +RTP Sbjct: 148 HRKKSSKRKEEVNKAKTTPNVVSKDHKLPKVDELTRSKSVVPRVDDINDGSTVNKRQRTP 207 Query: 750 TFNQLTAPYHEPFCLDIFITKSSVRACIVHRATSNVVVVAHSISKDMKFDLKSTKDDNAC 571 TFNQLT PYHEPFCLDIFI+K+SVRAC+VHR TS VV VAHSISKD KFDL STK+ C Sbjct: 208 TFNQLTGPYHEPFCLDIFISKASVRACVVHRVTSKVVAVAHSISKDFKFDLASTKNKTTC 267 Query: 570 AAVGGILAQRALADDIHDIVYTPRKGDKVEGKLQIVLQSLIDHG 439 AAVG ILAQRALADDIHDIVYTPRKG++VEGKLQIVLQS+ID+G Sbjct: 268 AAVGAILAQRALADDIHDIVYTPRKGERVEGKLQIVLQSIIDNG 311 >ref|XP_004141580.1| PREDICTED: uncharacterized protein LOC101213193 [Cucumis sativus] gi|449481530|ref|XP_004156210.1| PREDICTED: uncharacterized LOC101213193 [Cucumis sativus] Length = 334 Score = 229 bits (583), Expect = 2e-57 Identities = 126/250 (50%), Positives = 155/250 (62%), Gaps = 7/250 (2%) Frame = -3 Query: 1167 NIELVDHDSWKVSSGLSEAWRQQMNG--SFERKSKVVXXXXXXXXXXXXXXXXXEFDDIE 994 ++ELVD D+W VS GL+ AW + G FE + + +FDDI+ Sbjct: 68 DVELVDDDTWAVSCGLARAWEAREKGWSGFENRYSL-----EDEAHDPVDYCDSDFDDID 122 Query: 993 DMRFRGKLFYKLDRDSREFEEYNLDLXXXXXXXXXXXXXXXXXXKVNLXXXXXXXXXXXX 814 +MR RG LFYKLD+ S+EFEE +LD KVN Sbjct: 123 NMRIRGNLFYKLDQASKEFEECSLDFHRKKKSLKEKEDMVKRRSKVNDKLDKCLASGQVK 182 Query: 813 XXXXPREGM-----DTSSVGKTERTPTFNQLTAPYHEPFCLDIFITKSSVRACIVHRATS 649 + + V K RTPTFNQLT+PYHEPFCLDIFI+K+SVRACI+HR TS Sbjct: 183 LPEHLKNKYVIVERENDDVEKKLRTPTFNQLTSPYHEPFCLDIFISKASVRACIIHRVTS 242 Query: 648 NVVVVAHSISKDMKFDLKSTKDDNACAAVGGILAQRALADDIHDIVYTPRKGDKVEGKLQ 469 VV VAHSISKDMKFDL S KD +ACAAVG +LAQRAL DDIH+++YTPRKG+++EGKLQ Sbjct: 243 KVVAVAHSISKDMKFDLTSRKDSSACAAVGAVLAQRALGDDIHNLIYTPRKGERIEGKLQ 302 Query: 468 IVLQSLIDHG 439 IVLQS+ID+G Sbjct: 303 IVLQSVIDNG 312 >ref|XP_002883368.1| structural constituent of ribosome [Arabidopsis lyrata subsp. lyrata] gi|297329208|gb|EFH59627.1| structural constituent of ribosome [Arabidopsis lyrata subsp. lyrata] Length = 311 Score = 223 bits (568), Expect = 1e-55 Identities = 123/252 (48%), Positives = 148/252 (58%), Gaps = 3/252 (1%) Frame = -3 Query: 1185 AQLKDINIELVDHDSWKVSSGLSEAWRQQMNGSFERKSKVVXXXXXXXXXXXXXXXXXEF 1006 A L IE VD D+W VSS LS+AWRQ + + + Sbjct: 42 AGLSGCGIETVDDDAWHVSSSLSQAWRQFQADTAKNSPVTIQGVRETMLDDEDPDH---- 97 Query: 1005 DDIEDMRFRGKLFYKLDRDSREFEEYNLDLXXXXXXXXXXXXXXXXXXKV---NLXXXXX 835 D+I++MR RG LFYKLDR S+EFEEYN D N Sbjct: 98 DEIDNMRIRGDLFYKLDRGSKEFEEYNYDFHRKNQHKNVKREQNQEEETTMKKNNKKEVR 157 Query: 834 XXXXXXXXXXXPREGMDTSSVGKTERTPTFNQLTAPYHEPFCLDIFITKSSVRACIVHRA 655 ++V K ERT TFNQLTAP+H PFCLDI+I+K SVRAC++HR Sbjct: 158 EEYKKRNDSFTGETDHPNAAVRKRERTFTFNQLTAPFHYPFCLDIYISKESVRACVIHRV 217 Query: 654 TSNVVVVAHSISKDMKFDLKSTKDDNACAAVGGILAQRALADDIHDIVYTPRKGDKVEGK 475 TS VV VAHSISKDMKFDL ST++ ACAAVG +LAQR L DDIHD++YTPRKGDK+EGK Sbjct: 218 TSKVVTVAHSISKDMKFDLGSTRNAAACAAVGAVLAQRCLEDDIHDVIYTPRKGDKIEGK 277 Query: 474 LQIVLQSLIDHG 439 LQ+VLQ+LID+G Sbjct: 278 LQVVLQALIDNG 289