BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00026740
         (288 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634263.1| PREDICTED: pentatricopeptide repeat-containi...   150   1e-34
emb|CBI15198.3| unnamed protein product [Vitis vinifera]              150   1e-34
emb|CAN66662.1| hypothetical protein VITISV_031722 [Vitis vinifera]   150   1e-34
ref|XP_004167903.1| PREDICTED: pentatricopeptide repeat-containi...   140   1e-31
ref|NP_200948.1| pentatricopeptide repeat-containing protein [Ar...   130   1e-28

>ref|XP_003634263.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g61400-like [Vitis vinifera]
          Length = 665

 Score =  150 bits (378), Expect = 1e-34
 Identities = 70/96 (72%), Positives = 83/96 (86%)
 Frame = +1

Query: 1   QEGVLGNAATYNALIDGYCKERSMDKALKVCSQMTEKNIEPNIITFTSLINGYCNEKKIE 180
           ++G L NA TYN LIDGYCKE +M+KA++VCSQMTEK IEPNIITF++LI+GYC   K+E
Sbjct: 396 KKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKME 455

Query: 181 AAMGIYSEMVIKGLVPDVVCYTALIHGHLKDGNMKE 288
           AAMG+Y+EMVIKGL+PDVV YTALI GH KDGN KE
Sbjct: 456 AAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKE 491



 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 39/94 (41%), Positives = 60/94 (63%)
 Frame = +1

Query: 7   GVLGNAATYNALIDGYCKERSMDKALKVCSQMTEKNIEPNIITFTSLINGYCNEKKIEAA 186
           GV+ N   YN LIDGYCK  ++ +AL + S++ +  I P++ T++ LI G C   ++E A
Sbjct: 328 GVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEA 387

Query: 187 MGIYSEMVIKGLVPDVVCYTALIHGHLKDGNMKE 288
            G+  EM  KG +P+ V Y  LI G+ K+GNM++
Sbjct: 388 DGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEK 421



 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 36/94 (38%), Positives = 56/94 (59%)
 Frame = +1

Query: 7   GVLGNAATYNALIDGYCKERSMDKALKVCSQMTEKNIEPNIITFTSLINGYCNEKKIEAA 186
           G+L N  TYN ++DGYCK   + KAL++  +M    + PN++TF  LI+G C   ++ +A
Sbjct: 258 GMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSA 317

Query: 187 MGIYSEMVIKGLVPDVVCYTALIHGHLKDGNMKE 288
                +M   G+VP++  Y  LI G+ K GN+ E
Sbjct: 318 RKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSE 351



 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 32/96 (33%), Positives = 58/96 (60%)
 Frame = +1

Query: 1   QEGVLGNAATYNALIDGYCKERSMDKALKVCSQMTEKNIEPNIITFTSLINGYCNEKKIE 180
           ++G+  N  T++ LIDGYCK   M+ A+ + ++M  K + P+++ +T+LI+G+  +   +
Sbjct: 431 EKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTK 490

Query: 181 AAMGIYSEMVIKGLVPDVVCYTALIHGHLKDGNMKE 288
            A  ++ EM   GL P+V   + LI G  KDG + +
Sbjct: 491 EAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISD 526



 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 31/94 (32%), Positives = 52/94 (55%)
 Frame = +1

Query: 7   GVLGNAATYNALIDGYCKERSMDKALKVCSQMTEKNIEPNIITFTSLINGYCNEKKIEAA 186
           G   N  TY  LIDG C++    KA ++  +M EK I P ++ +T LI G C E +I  A
Sbjct: 188 GASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEA 247

Query: 187 MGIYSEMVIKGLVPDVVCYTALIHGHLKDGNMKE 288
             ++  M   G++P++  Y  ++ G+ K  ++K+
Sbjct: 248 ESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKK 281



 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 34/95 (35%), Positives = 49/95 (51%)
 Frame = +1

Query: 4   EGVLGNAATYNALIDGYCKERSMDKALKVCSQMTEKNIEPNIITFTSLINGYCNEKKIEA 183
           +G+L N  T+  LIDG CK   M  A K    M    + PNI  +  LI+GYC    +  
Sbjct: 292 DGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSE 351

Query: 184 AMGIYSEMVIKGLVPDVVCYTALIHGHLKDGNMKE 288
           A+ ++SE+    ++PDV  Y+ LI G      M+E
Sbjct: 352 ALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEE 386



 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 28/85 (32%), Positives = 44/85 (51%)
 Frame = +1

Query: 34  NALIDGYCKERSMDKALKVCSQMTEKNIEPNIITFTSLINGYCNEKKIEAAMGIYSEMVI 213
           N ++DG  K+   D   KV   M  +   PN++T+ +LI+G C +     A  ++ EM+ 
Sbjct: 162 NMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIE 221

Query: 214 KGLVPDVVCYTALIHGHLKDGNMKE 288
           K + P VV YT LI G   +  + E
Sbjct: 222 KKIFPTVVIYTILIRGLCGESRISE 246



 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 28/94 (29%), Positives = 49/94 (52%)
 Frame = +1

Query: 1   QEGVLGNAATYNALIDGYCKERSMDKALKVCSQMTEKNIEPNIITFTSLINGYCNEKKIE 180
           ++ +      Y  LI G C E  + +A  +   M    + PN+ T+ ++++GYC    ++
Sbjct: 221 EKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVK 280

Query: 181 AAMGIYSEMVIKGLVPDVVCYTALIHGHLKDGNM 282
            A+ +Y EM+  GL+P+VV +  LI G  K   M
Sbjct: 281 KALELYQEMLGDGLLPNVVTFGILIDGLCKTDEM 314



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 32/106 (30%), Positives = 55/106 (51%), Gaps = 13/106 (12%)
 Frame = +1

Query: 4   EGVLGNAATYNALIDGYCKERSMDKALKVCSQMTEKNIEPNIITFTSLINGYCNEKKIEA 183
           +G+L +   Y ALIDG+ K+ +  +A ++  +M E  + PN+ T + LI+G C + +I  
Sbjct: 467 KGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISD 526

Query: 184 AMGIY-------------SEMVIKGLVPDVVCYTALIHGHLKDGNM 282
           A+ ++             +E+      P+ V YTALI G   DG +
Sbjct: 527 AIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRI 572



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 30/109 (27%), Positives = 53/109 (48%), Gaps = 13/109 (11%)
 Frame = +1

Query: 1   QEGVLGNAATYNALIDGYCKERSMDKALKV-------------CSQMTEKNIEPNIITFT 141
           + G+  N  T + LIDG CK+  +  A+K+              +++      PN + +T
Sbjct: 501 EAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYT 560

Query: 142 SLINGYCNEKKIEAAMGIYSEMVIKGLVPDVVCYTALIHGHLKDGNMKE 288
           +LI G C + +I  A   +S+M   GL PDV     +I GH +  ++++
Sbjct: 561 ALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRD 609


>emb|CBI15198.3| unnamed protein product [Vitis vinifera]
          Length = 948

 Score =  150 bits (378), Expect = 1e-34
 Identities = 70/96 (72%), Positives = 83/96 (86%)
 Frame = +1

Query: 1   QEGVLGNAATYNALIDGYCKERSMDKALKVCSQMTEKNIEPNIITFTSLINGYCNEKKIE 180
           ++G L NA TYN LIDGYCKE +M+KA++VCSQMTEK IEPNIITF++LI+GYC   K+E
Sbjct: 396 KKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKME 455

Query: 181 AAMGIYSEMVIKGLVPDVVCYTALIHGHLKDGNMKE 288
           AAMG+Y+EMVIKGL+PDVV YTALI GH KDGN KE
Sbjct: 456 AAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKE 491



 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 39/94 (41%), Positives = 60/94 (63%)
 Frame = +1

Query: 7   GVLGNAATYNALIDGYCKERSMDKALKVCSQMTEKNIEPNIITFTSLINGYCNEKKIEAA 186
           GV+ N   YN LIDGYCK  ++ +AL + S++ +  I P++ T++ LI G C   ++E A
Sbjct: 328 GVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEA 387

Query: 187 MGIYSEMVIKGLVPDVVCYTALIHGHLKDGNMKE 288
            G+  EM  KG +P+ V Y  LI G+ K+GNM++
Sbjct: 388 DGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEK 421



 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 36/94 (38%), Positives = 56/94 (59%)
 Frame = +1

Query: 7   GVLGNAATYNALIDGYCKERSMDKALKVCSQMTEKNIEPNIITFTSLINGYCNEKKIEAA 186
           G+L N  TYN ++DGYCK   + KAL++  +M    + PN++TF  LI+G C   ++ +A
Sbjct: 258 GMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSA 317

Query: 187 MGIYSEMVIKGLVPDVVCYTALIHGHLKDGNMKE 288
                +M   G+VP++  Y  LI G+ K GN+ E
Sbjct: 318 RKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSE 351



 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 32/96 (33%), Positives = 58/96 (60%)
 Frame = +1

Query: 1   QEGVLGNAATYNALIDGYCKERSMDKALKVCSQMTEKNIEPNIITFTSLINGYCNEKKIE 180
           ++G+  N  T++ LIDGYCK   M+ A+ + ++M  K + P+++ +T+LI+G+  +   +
Sbjct: 431 EKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTK 490

Query: 181 AAMGIYSEMVIKGLVPDVVCYTALIHGHLKDGNMKE 288
            A  ++ EM   GL P+V   + LI G  KDG + +
Sbjct: 491 EAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISD 526



 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 31/94 (32%), Positives = 52/94 (55%)
 Frame = +1

Query: 7   GVLGNAATYNALIDGYCKERSMDKALKVCSQMTEKNIEPNIITFTSLINGYCNEKKIEAA 186
           G   N  TY  LIDG C++    KA ++  +M EK I P ++ +T LI G C E +I  A
Sbjct: 188 GASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEA 247

Query: 187 MGIYSEMVIKGLVPDVVCYTALIHGHLKDGNMKE 288
             ++  M   G++P++  Y  ++ G+ K  ++K+
Sbjct: 248 ESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKK 281



 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 34/95 (35%), Positives = 49/95 (51%)
 Frame = +1

Query: 4   EGVLGNAATYNALIDGYCKERSMDKALKVCSQMTEKNIEPNIITFTSLINGYCNEKKIEA 183
           +G+L N  T+  LIDG CK   M  A K    M    + PNI  +  LI+GYC    +  
Sbjct: 292 DGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSE 351

Query: 184 AMGIYSEMVIKGLVPDVVCYTALIHGHLKDGNMKE 288
           A+ ++SE+    ++PDV  Y+ LI G      M+E
Sbjct: 352 ALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEE 386



 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 28/85 (32%), Positives = 44/85 (51%)
 Frame = +1

Query: 34  NALIDGYCKERSMDKALKVCSQMTEKNIEPNIITFTSLINGYCNEKKIEAAMGIYSEMVI 213
           N ++DG  K+   D   KV   M  +   PN++T+ +LI+G C +     A  ++ EM+ 
Sbjct: 162 NMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIE 221

Query: 214 KGLVPDVVCYTALIHGHLKDGNMKE 288
           K + P VV YT LI G   +  + E
Sbjct: 222 KKIFPTVVIYTILIRGLCGESRISE 246



 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 28/94 (29%), Positives = 49/94 (52%)
 Frame = +1

Query: 1   QEGVLGNAATYNALIDGYCKERSMDKALKVCSQMTEKNIEPNIITFTSLINGYCNEKKIE 180
           ++ +      Y  LI G C E  + +A  +   M    + PN+ T+ ++++GYC    ++
Sbjct: 221 EKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVK 280

Query: 181 AAMGIYSEMVIKGLVPDVVCYTALIHGHLKDGNM 282
            A+ +Y EM+  GL+P+VV +  LI G  K   M
Sbjct: 281 KALELYQEMLGDGLLPNVVTFGILIDGLCKTDEM 314


>emb|CAN66662.1| hypothetical protein VITISV_031722 [Vitis vinifera]
          Length = 1060

 Score =  150 bits (378), Expect = 1e-34
 Identities = 70/96 (72%), Positives = 83/96 (86%)
 Frame = +1

Query: 1   QEGVLGNAATYNALIDGYCKERSMDKALKVCSQMTEKNIEPNIITFTSLINGYCNEKKIE 180
           ++G L NA TYN LIDGYCKE +M+KA++VCSQMTEK IEPNIITF++LI+GYC   K+E
Sbjct: 396 KKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKME 455

Query: 181 AAMGIYSEMVIKGLVPDVVCYTALIHGHLKDGNMKE 288
           AAMG+Y+EMVIKGL+PDVV YTALI GH KDGN KE
Sbjct: 456 AAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKE 491



 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 39/94 (41%), Positives = 60/94 (63%)
 Frame = +1

Query: 7   GVLGNAATYNALIDGYCKERSMDKALKVCSQMTEKNIEPNIITFTSLINGYCNEKKIEAA 186
           GV+ N   YN LIDGYCK  ++ +AL + S++ +  I P++ T++ LI G C   ++E A
Sbjct: 328 GVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEA 387

Query: 187 MGIYSEMVIKGLVPDVVCYTALIHGHLKDGNMKE 288
            G+  EM  KG +P+ V Y  LI G+ K+GNM++
Sbjct: 388 DGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEK 421



 Score = 76.3 bits (186), Expect = 3e-12
 Identities = 36/94 (38%), Positives = 56/94 (59%)
 Frame = +1

Query: 7   GVLGNAATYNALIDGYCKERSMDKALKVCSQMTEKNIEPNIITFTSLINGYCNEKKIEAA 186
           G+L N  TYN ++DGYCK   + KAL++  +M    + PN++TF  LI+G C   ++ +A
Sbjct: 258 GMLPNLYTYNTMMDGYCKIAHVKKALELYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSA 317

Query: 187 MGIYSEMVIKGLVPDVVCYTALIHGHLKDGNMKE 288
                +M   G+VP++  Y  LI G+ K GN+ E
Sbjct: 318 RKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSE 351



 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 32/96 (33%), Positives = 58/96 (60%)
 Frame = +1

Query: 1   QEGVLGNAATYNALIDGYCKERSMDKALKVCSQMTEKNIEPNIITFTSLINGYCNEKKIE 180
           ++G+  N  T++ LIDGYCK   M+ A+ + ++M  K + P+++ +T+LI+G+  +   +
Sbjct: 431 EKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTK 490

Query: 181 AAMGIYSEMVIKGLVPDVVCYTALIHGHLKDGNMKE 288
            A  ++ EM   GL P+V   + LI G  KDG + +
Sbjct: 491 EAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISD 526



 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 31/94 (32%), Positives = 52/94 (55%)
 Frame = +1

Query: 7   GVLGNAATYNALIDGYCKERSMDKALKVCSQMTEKNIEPNIITFTSLINGYCNEKKIEAA 186
           G   N  TY  LIDG C++    KA ++  +M EK I P ++ +T LI G C E +I  A
Sbjct: 188 GASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEA 247

Query: 187 MGIYSEMVIKGLVPDVVCYTALIHGHLKDGNMKE 288
             ++  M   G++P++  Y  ++ G+ K  ++K+
Sbjct: 248 ESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKK 281



 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 34/95 (35%), Positives = 49/95 (51%)
 Frame = +1

Query: 4   EGVLGNAATYNALIDGYCKERSMDKALKVCSQMTEKNIEPNIITFTSLINGYCNEKKIEA 183
           +G+L N  T+  LIDG CK   M  A K    M    + PNI  +  LI+GYC    +  
Sbjct: 292 DGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSE 351

Query: 184 AMGIYSEMVIKGLVPDVVCYTALIHGHLKDGNMKE 288
           A+ ++SE+    ++PDV  Y+ LI G      M+E
Sbjct: 352 ALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEE 386



 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 28/85 (32%), Positives = 44/85 (51%)
 Frame = +1

Query: 34  NALIDGYCKERSMDKALKVCSQMTEKNIEPNIITFTSLINGYCNEKKIEAAMGIYSEMVI 213
           N ++DG  K+   D   KV   M  +   PN++T+ +LI+G C +     A  ++ EM+ 
Sbjct: 162 NMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIE 221

Query: 214 KGLVPDVVCYTALIHGHLKDGNMKE 288
           K + P VV YT LI G   +  + E
Sbjct: 222 KKIFPTVVIYTILIRGLCGESRISE 246



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 28/94 (29%), Positives = 49/94 (52%)
 Frame = +1

Query: 1   QEGVLGNAATYNALIDGYCKERSMDKALKVCSQMTEKNIEPNIITFTSLINGYCNEKKIE 180
           ++ +      Y  LI G C E  + +A  +   M    + PN+ T+ ++++GYC    ++
Sbjct: 221 EKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVK 280

Query: 181 AAMGIYSEMVIKGLVPDVVCYTALIHGHLKDGNM 282
            A+ +Y EM+  GL+P+VV +  LI G  K   M
Sbjct: 281 KALELYXEMLGDGLLPNVVTFGILIDGLCKTDEM 314



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 32/106 (30%), Positives = 55/106 (51%), Gaps = 13/106 (12%)
 Frame = +1

Query: 4   EGVLGNAATYNALIDGYCKERSMDKALKVCSQMTEKNIEPNIITFTSLINGYCNEKKIEA 183
           +G+L +   Y ALIDG+ K+ +  +A ++  +M E  + PN+ T + LI+G C + +I  
Sbjct: 467 KGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISD 526

Query: 184 AMGIY-------------SEMVIKGLVPDVVCYTALIHGHLKDGNM 282
           A+ ++             +E+      P+ V YTALI G   DG +
Sbjct: 527 AIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRI 572



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 30/109 (27%), Positives = 53/109 (48%), Gaps = 13/109 (11%)
 Frame = +1

Query: 1   QEGVLGNAATYNALIDGYCKERSMDKALKV-------------CSQMTEKNIEPNIITFT 141
           + G+  N  T + LIDG CK+  +  A+K+              +++      PN + +T
Sbjct: 501 EAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYT 560

Query: 142 SLINGYCNEKKIEAAMGIYSEMVIKGLVPDVVCYTALIHGHLKDGNMKE 288
           +LI G C + +I  A   +S+M   GL PDV     +I GH +  ++++
Sbjct: 561 ALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRD 609


>ref|XP_004167903.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g61400-like [Cucumis sativus]
          Length = 645

 Score =  140 bits (353), Expect = 1e-31
 Identities = 64/96 (66%), Positives = 80/96 (83%)
 Frame = +1

Query: 1   QEGVLGNAATYNALIDGYCKERSMDKALKVCSQMTEKNIEPNIITFTSLINGYCNEKKIE 180
           +EG+L N+ TYN+LIDG CKE  MDKAL++CSQMTE  +EPN+ITF++LI+GYC  + ++
Sbjct: 385 KEGILANSVTYNSLIDGCCKEGKMDKALEICSQMTENGVEPNVITFSTLIDGYCKIRNLQ 444

Query: 181 AAMGIYSEMVIKGLVPDVVCYTALIHGHLKDGNMKE 288
           AAMGIYSEMVIK L PDVV YTA+I GH K G+MKE
Sbjct: 445 AAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYGSMKE 480



 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 33/96 (34%), Positives = 63/96 (65%)
 Frame = +1

Query: 1   QEGVLGNAATYNALIDGYCKERSMDKALKVCSQMTEKNIEPNIITFTSLINGYCNEKKIE 180
           + GV  N  T++ LIDGYCK R++  A+ + S+M  K++ P+++T+T++I+G+C    ++
Sbjct: 420 ENGVEPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYGSMK 479

Query: 181 AAMGIYSEMVIKGLVPDVVCYTALIHGHLKDGNMKE 288
            A+ +YS+M+  G+ P+    + L+ G  KDG + +
Sbjct: 480 EALKLYSDMLDNGITPNCYTISCLLDGLCKDGKISD 515



 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 33/94 (35%), Positives = 54/94 (57%)
 Frame = +1

Query: 4   EGVLGNAATYNALIDGYCKERSMDKALKVCSQMTEKNIEPNIITFTSLINGYCNEKKIEA 183
           +G++     Y  LI G C +  +++A  +   M E  + PN+ T+ +L++GYC     + 
Sbjct: 211 KGIVPTVIVYTILIRGLCSDNKIEEAESMHRAMREVGVYPNVYTYNTLMDGYCKLANAKQ 270

Query: 184 AMGIYSEMVIKGLVPDVVCYTALIHGHLKDGNMK 285
           A+ +Y +M+ +GLVPDVV +  LI G  K G MK
Sbjct: 271 ALRLYQDMLGEGLVPDVVTFGILIDGLCKFGEMK 304



 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 32/94 (34%), Positives = 56/94 (59%)
 Frame = +1

Query: 7   GVLGNAATYNALIDGYCKERSMDKALKVCSQMTEKNIEPNIITFTSLINGYCNEKKIEAA 186
           GV  N  TYN L+DGYCK  +  +AL++   M  + + P+++TF  LI+G C   +++AA
Sbjct: 247 GVYPNVYTYNTLMDGYCKLANAKQALRLYQDMLGEGLVPDVVTFGILIDGLCKFGEMKAA 306

Query: 187 MGIYSEMVIKGLVPDVVCYTALIHGHLKDGNMKE 288
             ++  M+   + P++  Y +LI  + K G++ E
Sbjct: 307 RNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSE 340



 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 37/103 (35%), Positives = 56/103 (54%), Gaps = 13/103 (12%)
 Frame = +1

Query: 19  NAATYNALIDGYCKERSMDKALKVCSQMTEKNIEPNIITFTSLINGYCNEKKIEAAMGIY 198
           +  TY A+IDG+CK  SM +ALK+ S M +  I PN  T + L++G C + KI  A+ ++
Sbjct: 461 DVVTYTAMIDGHCKYGSMKEALKLYSDMLDNGITPNCYTISCLLDGLCKDGKISDALELF 520

Query: 199 SEMV-------------IKGLVPDVVCYTALIHGHLKDGNMKE 288
           +E +              K  + + V YTALIHG  +DG   +
Sbjct: 521 TEKIEFQTPRCNVDAGGSKPSLTNHVAYTALIHGLCQDGQFSK 563



 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 31/91 (34%), Positives = 53/91 (58%)
 Frame = +1

Query: 10  VLGNAATYNALIDGYCKERSMDKALKVCSQMTEKNIEPNIITFTSLINGYCNEKKIEAAM 189
           V  N A YN+LID YCK   + +A+ +  ++    + P++ T++ LI G C+  + E A 
Sbjct: 318 VTPNIAVYNSLIDAYCKVGDVSEAMALFLELERFEVSPDVFTYSILIRGLCSVSRTEEAG 377

Query: 190 GIYSEMVIKGLVPDVVCYTALIHGHLKDGNM 282
            I+ +M  +G++ + V Y +LI G  K+G M
Sbjct: 378 NIFEKMTKEGILANSVTYNSLIDGCCKEGKM 408



 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 32/94 (34%), Positives = 53/94 (56%)
 Frame = +1

Query: 7   GVLGNAATYNALIDGYCKERSMDKALKVCSQMTEKNIEPNIITFTSLINGYCNEKKIEAA 186
           G+  +  T+  LIDG C++  + +A ++  +M  K I P +I +T LI G C++ KIE A
Sbjct: 177 GLSPSVITFGTLIDGCCRQGDLLRAQEMFDEMRVKGIVPTVIVYTILIRGLCSDNKIEEA 236

Query: 187 MGIYSEMVIKGLVPDVVCYTALIHGHLKDGNMKE 288
             ++  M   G+ P+V  Y  L+ G+ K  N K+
Sbjct: 237 ESMHRAMREVGVYPNVYTYNTLMDGYCKLANAKQ 270



 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 30/86 (34%), Positives = 46/86 (53%)
 Frame = +1

Query: 4   EGVLGNAATYNALIDGYCKERSMDKALKVCSQMTEKNIEPNIITFTSLINGYCNEKKIEA 183
           EG++ +  T+  LIDG CK   M  A  +   M + ++ PNI  + SLI+ YC    +  
Sbjct: 281 EGLVPDVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSE 340

Query: 184 AMGIYSEMVIKGLVPDVVCYTALIHG 261
           AM ++ E+    + PDV  Y+ LI G
Sbjct: 341 AMALFLELERFEVSPDVFTYSILIRG 366



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 27/85 (31%), Positives = 46/85 (54%)
 Frame = +1

Query: 34  NALIDGYCKERSMDKALKVCSQMTEKNIEPNIITFTSLINGYCNEKKIEAAMGIYSEMVI 213
           N L+    K    +   ++  +M    + P++ITF +LI+G C +  +  A  ++ EM +
Sbjct: 151 NVLLYVLVKTGRFELLWRIYEEMISNGLSPSVITFGTLIDGCCRQGDLLRAQEMFDEMRV 210

Query: 214 KGLVPDVVCYTALIHGHLKDGNMKE 288
           KG+VP V+ YT LI G   D  ++E
Sbjct: 211 KGIVPTVIVYTILIRGLCSDNKIEE 235


>ref|NP_200948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75171473|sp|Q9FLJ4.1|PP440_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At5g61400 gi|9757861|dbj|BAB08495.1| unnamed protein
           product [Arabidopsis thaliana]
           gi|332010079|gb|AED97462.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 654

 Score =  130 bits (326), Expect = 1e-28
 Identities = 59/95 (62%), Positives = 77/95 (81%)
 Frame = +1

Query: 4   EGVLGNAATYNALIDGYCKERSMDKALKVCSQMTEKNIEPNIITFTSLINGYCNEKKIEA 183
           E +  ++ATYN+LI GYCKE +M++AL +CS+MT   +EPNIITF++LI+GYCN + I+A
Sbjct: 403 ERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKA 462

Query: 184 AMGIYSEMVIKGLVPDVVCYTALIHGHLKDGNMKE 288
           AMG+Y EM IKG+VPDVV YTALI  H K+ NMKE
Sbjct: 463 AMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKE 497



 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 36/96 (37%), Positives = 60/96 (62%)
 Frame = +1

Query: 1   QEGVLGNAATYNALIDGYCKERSMDKALKVCSQMTEKNIEPNIITFTSLINGYCNEKKIE 180
           + GVL N  TY+A+IDGYCK  ++ +A  +  ++    + PN++ F +L++G+C  +++ 
Sbjct: 262 KHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELV 321

Query: 181 AAMGIYSEMVIKGLVPDVVCYTALIHGHLKDGNMKE 288
            A  ++  MV  G+ P++  Y  LIHGH K GNM E
Sbjct: 322 TARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLE 357



 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 35/94 (37%), Positives = 57/94 (60%)
 Frame = +1

Query: 7   GVLGNAATYNALIDGYCKERSMDKALKVCSQMTEKNIEPNIITFTSLINGYCNEKKIEAA 186
           GV  N   YN LI G+CK  +M +A+ + S+M   N+ P++ T+T LING C E ++  A
Sbjct: 334 GVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEA 393

Query: 187 MGIYSEMVIKGLVPDVVCYTALIHGHLKDGNMKE 288
             ++ +M  + + P    Y +LIHG+ K+ NM++
Sbjct: 394 NRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQ 427



 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 32/92 (34%), Positives = 57/92 (61%)
 Frame = +1

Query: 7   GVLGNAATYNALIDGYCKERSMDKALKVCSQMTEKNIEPNIITFTSLINGYCNEKKIEAA 186
           GV  N  T++ LIDGYC  R +  A+ +  +MT K I P+++T+T+LI+ +  E  ++ A
Sbjct: 439 GVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEA 498

Query: 187 MGIYSEMVIKGLVPDVVCYTALIHGHLKDGNM 282
           + +YS+M+  G+ P+   +  L+ G  K+G +
Sbjct: 499 LRLYSDMLEAGIHPNDHTFACLVDGFWKEGRL 530



 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 30/84 (35%), Positives = 47/84 (55%)
 Frame = +1

Query: 10  VLGNAATYNALIDGYCKERSMDKALKVCSQMTEKNIEPNIITFTSLINGYCNEKKIEAAM 189
           +L N   +  L+DG+CK R +  A  +   M +  ++PN+  +  LI+G+C    +  A+
Sbjct: 300 LLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAV 359

Query: 190 GIYSEMVIKGLVPDVVCYTALIHG 261
           G+ SEM    L PDV  YT LI+G
Sbjct: 360 GLLSEMESLNLSPDVFTYTILING 383



 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 27/88 (30%), Positives = 50/88 (56%)
 Frame = +1

Query: 7   GVLGNAATYNALIDGYCKERSMDKALKVCSQMTEKNIEPNIITFTSLINGYCNEKKIEAA 186
           G+  N   Y   I   C++  M++A K+   M +  + PN+ T++++I+GYC    +  A
Sbjct: 229 GIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQA 288

Query: 187 MGIYSEMVIKGLVPDVVCYTALIHGHLK 270
            G+Y E+++  L+P+VV +  L+ G  K
Sbjct: 289 YGLYKEILVAELLPNVVVFGTLVDGFCK 316



 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 32/91 (35%), Positives = 52/91 (57%)
 Frame = +1

Query: 4   EGVLGNAATYNALIDGYCKERSMDKALKVCSQMTEKNIEPNIITFTSLINGYCNEKKIEA 183
           +G++ +  TY ALID + KE +M +AL++ S M E  I PN  TF  L++G+  E ++  
Sbjct: 473 KGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSV 532

Query: 184 AMGIYSEMVIKGLVPDVVCYTALIHGHLKDG 276
           A+  Y E   +    + V +T LI G  ++G
Sbjct: 533 AIDFYQENNQQRSCWNHVGFTCLIEGLCQNG 563