BLASTX nr result

ID: Coptis21_contig00026731 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00026731
         (355 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002309500.1| predicted protein [Populus trichocarpa] gi|2...    73   2e-11
ref|XP_002279173.2| PREDICTED: probable leucine-rich repeat rece...    68   9e-10
ref|XP_003609204.1| hypothetical protein MTR_4g113100 [Medicago ...    67   1e-09
ref|XP_004159291.1| PREDICTED: probable leucine-rich repeat rece...    65   4e-09
ref|XP_004135084.1| PREDICTED: probable leucine-rich repeat rece...    65   4e-09

>ref|XP_002309500.1| predicted protein [Populus trichocarpa] gi|222855476|gb|EEE93023.1|
           predicted protein [Populus trichocarpa]
          Length = 651

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 46/119 (38%), Positives = 66/119 (55%), Gaps = 3/119 (2%)
 Frame = -1

Query: 352 LLRLRRIDLSHNQFFGEIXXXXXXXXXXXXXXXLESNYFNGSLQTDTL---KALEDFSVS 182
           L RLRR+DLS+N F+GEI               L+ N F G +   +     ++ +F+VS
Sbjct: 138 LRRLRRLDLSYNYFYGEIPFPELAQMPRLLTLRLDFNSFTGKIGPFSFFPSGSILEFNVS 197

Query: 181 DNNLSGEIPRPLSLFFPSASFEGNENLCGEVLGKKCVKPTAKNEHPLPVEIPVGHGKKK 5
           +N LSGEIP   S F P +SF GN+NLCG+ L   C   T ++E   P ++ + + KKK
Sbjct: 198 NNFLSGEIPAIFSRF-PVSSFSGNKNLCGKPLALDCFHRTVESEPAKPGDVGMKNKKKK 255


>ref|XP_002279173.2| PREDICTED: probable leucine-rich repeat receptor-like protein
           kinase At1g68400-like [Vitis vinifera]
          Length = 608

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 41/92 (44%), Positives = 53/92 (57%), Gaps = 1/92 (1%)
 Frame = -1

Query: 346 RLRRIDLSHNQFFGEIXXXXXXXXXXXXXXXLESNYFNGSLQTDTLKA-LEDFSVSDNNL 170
           R+RR+ LSHN F GEI               LE N F G+L +++  + + DF+VS NNL
Sbjct: 133 RIRRLVLSHNNFSGEIPMNKLTQLRHLLTLRLEENSFTGTLSSNSSSSSIYDFNVSGNNL 192

Query: 169 SGEIPRPLSLFFPSASFEGNENLCGEVLGKKC 74
           +GEIP  LS  FP +SF  N  LCG+ LG  C
Sbjct: 193 AGEIPAWLSQ-FPLSSFARNAKLCGKPLGYSC 223


>ref|XP_003609204.1| hypothetical protein MTR_4g113100 [Medicago truncatula]
           gi|355510259|gb|AES91401.1| hypothetical protein
           MTR_4g113100 [Medicago truncatula]
          Length = 655

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 49/117 (41%), Positives = 58/117 (49%)
 Frame = -1

Query: 355 QLLRLRRIDLSHNQFFGEIXXXXXXXXXXXXXXXLESNYFNGSLQTDTLKALEDFSVSDN 176
           +L RL R+DLS N F G I                E+N F+GSL + T   L  F VS+N
Sbjct: 139 RLTRLTRLDLSSNNFTGSIPFSINNLTHLSGLFL-ENNTFSGSLPSITAN-LNGFDVSNN 196

Query: 175 NLSGEIPRPLSLFFPSASFEGNENLCGEVLGKKCVKPTAKNEHPLPVEIPVGHGKKK 5
           NL+G IP+ LS  FP ASF GN +LCG  L   C  P      P P  IP     KK
Sbjct: 197 NLNGSIPKTLSK-FPEASFAGNLDLCGPPLKTSC-SPFFPAPAPSPDNIPPADKPKK 251


>ref|XP_004159291.1| PREDICTED: probable leucine-rich repeat receptor-like protein
           kinase At1g68400-like [Cucumis sativus]
          Length = 672

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 42/103 (40%), Positives = 54/103 (52%)
 Frame = -1

Query: 352 LLRLRRIDLSHNQFFGEIXXXXXXXXXXXXXXXLESNYFNGSLQTDTLKALEDFSVSDNN 173
           L+RL R+DLSHN   GEI                E N F+G +    L  L+DF++S+N 
Sbjct: 135 LVRLYRLDLSHNNLTGEIPASVNRLTHLLTLRL-EDNRFSGPILELNLPNLQDFNISENR 193

Query: 172 LSGEIPRPLSLFFPSASFEGNENLCGEVLGKKCVKPTAKNEHP 44
           LSGEIP+ LS  FP +SF  N  LCG  L + C    +K   P
Sbjct: 194 LSGEIPKSLSA-FPESSFGQNMGLCGSPL-QSCKSIVSKPTEP 234


>ref|XP_004135084.1| PREDICTED: probable leucine-rich repeat receptor-like protein
           kinase At1g68400-like [Cucumis sativus]
          Length = 672

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 42/103 (40%), Positives = 54/103 (52%)
 Frame = -1

Query: 352 LLRLRRIDLSHNQFFGEIXXXXXXXXXXXXXXXLESNYFNGSLQTDTLKALEDFSVSDNN 173
           L+RL R+DLSHN   GEI                E N F+G +    L  L+DF++S+N 
Sbjct: 135 LVRLYRLDLSHNNLTGEIPASVNRLTHLLTLRL-EDNRFSGPILELNLPNLQDFNISENR 193

Query: 172 LSGEIPRPLSLFFPSASFEGNENLCGEVLGKKCVKPTAKNEHP 44
           LSGEIP+ LS  FP +SF  N  LCG  L + C    +K   P
Sbjct: 194 LSGEIPKSLSA-FPESSFGQNMGLCGSPL-QSCKSIVSKPTEP 234


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