BLASTX nr result

ID: Coptis21_contig00026730 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00026730
         (720 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532127.1| leucine-rich repeat containing protein, puta...   312   4e-83
sp|Q7XA40.2|RGA3_SOLBU RecName: Full=Putative disease resistance...   300   2e-79
gb|AAP45181.2| Disease resistant protein rga3, putative [Solanum...   300   2e-79
gb|AAR29073.1| blight resistance protein B149, partial [Solanum ...   300   3e-79
ref|XP_003517872.1| PREDICTED: disease resistance protein RGA2-l...   297   2e-78

>ref|XP_002532127.1| leucine-rich repeat containing protein, putative [Ricinus communis]
           gi|223528186|gb|EEF30247.1| leucine-rich repeat
           containing protein, putative [Ricinus communis]
          Length = 1142

 Score =  312 bits (800), Expect = 4e-83
 Identities = 149/239 (62%), Positives = 189/239 (79%)
 Frame = +3

Query: 3   LAQLVYNEDRVKEHFEVRIWVCVSEDFDIKRLTKAVIASISGNTCDLEELDPLQCRLQEQ 182
           LAQLVYN++RVK HF++RIWVCVS +FD++RL K +I S SGN C   +LDPLQ +LQE 
Sbjct: 182 LAQLVYNDERVKRHFDLRIWVCVSGEFDVRRLVKTIIESASGNACPCLDLDPLQRQLQEI 241

Query: 183 LAGKRYLLVLDDVWNENQEDWNRFMYSLKCGAKGSSVIVTTCLETVASITGTSPPYCLKF 362
           L+GKRYL+VLD VWN +Q+ W+R  + L CG+KGSS+IVTT +E VAS+ GT P + L  
Sbjct: 242 LSGKRYLIVLDHVWNGDQDKWDRLKFVLACGSKGSSIIVTTRMEKVASVMGTLPAHNLSG 301

Query: 363 LSEDDCWCLFKQRAFGMGNQGNPVLLKIGKEIVKKCGGVPLAAKALGGLMRFKGEENEWL 542
           LSE DCW LFK+RAF    + +P ++ IG EIVKKCGGVPLAAKALG LMR+K  ENEWL
Sbjct: 302 LSEADCWLLFKERAFECRREEHPSIICIGHEIVKKCGGVPLAAKALGSLMRYKNGENEWL 361

Query: 543 SVRDNGLWDLTQSKENNILPALRLSYSHLPLNLRQCFAFCSIFPKDHIIRKEEVIHLWM 719
           SV+++ +WDL Q  E +I+PALRLSYS+LPL LR+CF +C+IFPKD +I KE++I LWM
Sbjct: 362 SVKESEIWDLPQD-ECSIMPALRLSYSNLPLKLRKCFVYCAIFPKDCVIHKEDIILLWM 419


>sp|Q7XA40.2|RGA3_SOLBU RecName: Full=Putative disease resistance protein RGA3; AltName:
           Full=Blight resistance protein B149; AltName:
           Full=RGA1-blb gi|39636723|gb|AAR29070.1| blight
           resistance protein RGA1 [Solanum bulbocastanum]
           gi|113208411|gb|AAP45165.2| Disease resistance protein
           RGA3, putative [Solanum bulbocastanum]
          Length = 992

 Score =  300 bits (769), Expect = 2e-79
 Identities = 146/239 (61%), Positives = 183/239 (76%)
 Frame = +3

Query: 3   LAQLVYNEDRVKEHFEVRIWVCVSEDFDIKRLTKAVIASISGNTCDLEELDPLQCRLQEQ 182
           LAQ+V+N+ R+ EHF ++IWVCVS+DFD KRL KA++ SI G +    +L PLQ +LQE 
Sbjct: 191 LAQMVFNDQRITEHFNLKIWVCVSDDFDEKRLIKAIVESIEGKSLGDMDLAPLQKKLQEL 250

Query: 183 LAGKRYLLVLDDVWNENQEDWNRFMYSLKCGAKGSSVIVTTCLETVASITGTSPPYCLKF 362
           L GKRY LVLDDVWNE+QE W+     LK GA G+S+++TT LE + SI GT   Y L  
Sbjct: 251 LNGKRYFLVLDDVWNEDQEKWDNLRAVLKIGASGASILITTRLEKIGSIMGTLQLYQLSN 310

Query: 363 LSEDDCWCLFKQRAFGMGNQGNPVLLKIGKEIVKKCGGVPLAAKALGGLMRFKGEENEWL 542
           LS++DCW LFKQRAF    + +P L++IGKEIVKKCGGVPLAAK LGGL+RFK EE+EW 
Sbjct: 311 LSQEDCWLLFKQRAFCHQTETSPKLMEIGKEIVKKCGGVPLAAKTLGGLLRFKREESEWE 370

Query: 543 SVRDNGLWDLTQSKENNILPALRLSYSHLPLNLRQCFAFCSIFPKDHIIRKEEVIHLWM 719
            VRD+ +W+L Q  EN++LPALRLSY HLPL+LRQCFA+C++FPKD  I KE +I LWM
Sbjct: 371 HVRDSEIWNLPQD-ENSVLPALRLSYHHLPLDLRQCFAYCAVFPKDTKIEKEYLIALWM 428


>gb|AAP45181.2| Disease resistant protein rga3, putative [Solanum bulbocastanum]
          Length = 953

 Score =  300 bits (769), Expect = 2e-79
 Identities = 146/239 (61%), Positives = 183/239 (76%)
 Frame = +3

Query: 3   LAQLVYNEDRVKEHFEVRIWVCVSEDFDIKRLTKAVIASISGNTCDLEELDPLQCRLQEQ 182
           LAQ+V+N+ R+ EHF ++IWVCVS+DFD KRL KA++ SI G +    +L PLQ +LQE 
Sbjct: 191 LAQMVFNDQRITEHFNLKIWVCVSDDFDEKRLIKAIVESIEGKSLGDMDLAPLQKKLQEL 250

Query: 183 LAGKRYLLVLDDVWNENQEDWNRFMYSLKCGAKGSSVIVTTCLETVASITGTSPPYCLKF 362
           L GKRY LVLDDVWNE+QE W+     LK GA G+S+++TT LE + SI GT   Y L  
Sbjct: 251 LNGKRYFLVLDDVWNEDQEKWDNLRAVLKIGASGASILITTRLEKIGSIMGTLQLYQLSN 310

Query: 363 LSEDDCWCLFKQRAFGMGNQGNPVLLKIGKEIVKKCGGVPLAAKALGGLMRFKGEENEWL 542
           LS++DCW LFKQRAF    + +P L++IGKEIVKKCGGVPLAAK LGGL+RFK EE+EW 
Sbjct: 311 LSQEDCWLLFKQRAFCHQTETSPKLMEIGKEIVKKCGGVPLAAKTLGGLLRFKREESEWE 370

Query: 543 SVRDNGLWDLTQSKENNILPALRLSYSHLPLNLRQCFAFCSIFPKDHIIRKEEVIHLWM 719
            VRD+ +W+L Q  EN++LPALRLSY HLPL+LRQCFA+C++FPKD  I KE +I LWM
Sbjct: 371 HVRDSEIWNLPQD-ENSVLPALRLSYHHLPLDLRQCFAYCAVFPKDTKIEKEYLIALWM 428


>gb|AAR29073.1| blight resistance protein B149, partial [Solanum bulbocastanum]
          Length = 971

 Score =  300 bits (767), Expect = 3e-79
 Identities = 146/239 (61%), Positives = 182/239 (76%)
 Frame = +3

Query: 3   LAQLVYNEDRVKEHFEVRIWVCVSEDFDIKRLTKAVIASISGNTCDLEELDPLQCRLQEQ 182
           LAQ+V+N+ R+ EHF ++IWVCVS+DFD KRL KA++ SI G +    +L PLQ +LQE 
Sbjct: 191 LAQMVFNDQRITEHFNLKIWVCVSDDFDEKRLIKAIVESIEGKSLGDMDLAPLQKKLQEL 250

Query: 183 LAGKRYLLVLDDVWNENQEDWNRFMYSLKCGAKGSSVIVTTCLETVASITGTSPPYCLKF 362
           L GKRY LVLDDVWNE+QE W+     LK GA G+S+++TT LE + SI GT   Y L  
Sbjct: 251 LNGKRYFLVLDDVWNEDQEKWDNLRAVLKIGASGASILITTRLEKIGSIMGTLQLYQLSN 310

Query: 363 LSEDDCWCLFKQRAFGMGNQGNPVLLKIGKEIVKKCGGVPLAAKALGGLMRFKGEENEWL 542
           LS++DCW LFKQRAF    + +P L++IGKEIVKKCGGVPLAAK LGGL+RFK EE+EW 
Sbjct: 311 LSQEDCWLLFKQRAFCHQTETSPKLMEIGKEIVKKCGGVPLAAKTLGGLLRFKREESEWE 370

Query: 543 SVRDNGLWDLTQSKENNILPALRLSYSHLPLNLRQCFAFCSIFPKDHIIRKEEVIHLWM 719
            VRD+ +W L Q  EN++LPALRLSY HLPL+LRQCFA+C++FPKD  I KE +I LWM
Sbjct: 371 HVRDSEIWXLPQD-ENSVLPALRLSYHHLPLDLRQCFAYCAVFPKDTKIEKEYLIALWM 428


>ref|XP_003517872.1| PREDICTED: disease resistance protein RGA2-like [Glycine max]
          Length = 899

 Score =  297 bits (760), Expect = 2e-78
 Identities = 144/239 (60%), Positives = 185/239 (77%)
 Frame = +3

Query: 3   LAQLVYNEDRVKEHFEVRIWVCVSEDFDIKRLTKAVIASISGNTCDLEELDPLQCRLQEQ 182
           LAQL++N +RV  HFE+RIWVCVSEDF +KR+TKA+I + +G+  +  +L+PLQ RLQ+ 
Sbjct: 181 LAQLIFNCERVVNHFELRIWVCVSEDFSLKRMTKAIIEATTGHASEDLDLEPLQRRLQDL 240

Query: 183 LAGKRYLLVLDDVWNENQEDWNRFMYSLKCGAKGSSVIVTTCLETVASITGTSPPYCLKF 362
           L  KRYLLVLDDVW+E QE+W R    L CGAKG+S++VTT L  VA+I GT PP+ L  
Sbjct: 241 LQRKRYLLVLDDVWDEVQENWQRLKSVLACGAKGASILVTTRLPKVAAIMGTMPPHELSM 300

Query: 363 LSEDDCWCLFKQRAFGMGNQGNPVLLKIGKEIVKKCGGVPLAAKALGGLMRFKGEENEWL 542
           LS++DCW LFK RAFG        L+ IGKEIVKKC GVPLAAKALGGL+RFK +E EW+
Sbjct: 301 LSDNDCWELFKHRAFGPNEVEQVELVIIGKEIVKKCRGVPLAAKALGGLLRFKRDEKEWI 360

Query: 543 SVRDNGLWDLTQSKENNILPALRLSYSHLPLNLRQCFAFCSIFPKDHIIRKEEVIHLWM 719
            V+++ LW L  + EN+++PALRLSY +LP+ LRQCFA+C+IFPKD II+K+ +I LWM
Sbjct: 361 YVKESNLWSL-PNNENSVMPALRLSYLNLPIKLRQCFAYCAIFPKDEIIKKQYLIELWM 418


Top