BLASTX nr result

ID: Coptis21_contig00026716 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00026716
         (434 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004164091.1| PREDICTED: B3 domain-containing transcriptio...    75   7e-12
ref|XP_004145348.1| PREDICTED: B3 domain-containing transcriptio...    75   7e-12
ref|XP_002281517.1| PREDICTED: B3 domain-containing transcriptio...    72   6e-11
emb|CBI32503.3| unnamed protein product [Vitis vinifera]               72   6e-11
emb|CAN82369.1| hypothetical protein VITISV_027620 [Vitis vinifera]    72   6e-11

>ref|XP_004164091.1| PREDICTED: B3 domain-containing transcription factor VRN1-like
           [Cucumis sativus]
          Length = 375

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 36/77 (46%), Positives = 52/77 (67%), Gaps = 1/77 (1%)
 Frame = +2

Query: 53  LPSAFAKKFLKYAPREVTLRVSNGDTWHAQ-YSAGFHHVIQRGWSAFALDNDLKENDVCI 229
           +PS FA+K+LK    ++TL+VS+G  W  +    G    + RGW+ F +DNDLKE DVC+
Sbjct: 291 IPSKFAEKYLKGVWGDITLQVSSGKQWRVRCIREGPGTKLTRGWADFVVDNDLKEEDVCV 350

Query: 230 FELIDQKHITMKVSIIR 280
           FELI+ K I M+V++ R
Sbjct: 351 FELINMKDIVMQVTVFR 367


>ref|XP_004145348.1| PREDICTED: B3 domain-containing transcription factor VRN1-like
           [Cucumis sativus] gi|449471263|ref|XP_004153258.1|
           PREDICTED: B3 domain-containing transcription factor
           VRN1-like [Cucumis sativus]
          Length = 417

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 36/77 (46%), Positives = 52/77 (67%), Gaps = 1/77 (1%)
 Frame = +2

Query: 53  LPSAFAKKFLKYAPREVTLRVSNGDTWHAQ-YSAGFHHVIQRGWSAFALDNDLKENDVCI 229
           +PS FA+K+LK    ++TL+VS+G  W  +    G    + RGW+ F +DNDLKE DVC+
Sbjct: 333 IPSKFAEKYLKGVWGDITLQVSSGKQWRVRCIREGPGTKLTRGWADFVVDNDLKEEDVCV 392

Query: 230 FELIDQKHITMKVSIIR 280
           FELI+ K I M+V++ R
Sbjct: 393 FELINMKDIVMQVTVFR 409


>ref|XP_002281517.1| PREDICTED: B3 domain-containing transcription factor VRN1-like
           [Vitis vinifera]
          Length = 407

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 32/77 (41%), Positives = 51/77 (66%), Gaps = 1/77 (1%)
 Frame = +2

Query: 53  LPSAFAKKFLKYAPREVTLRVSNGDTWHAQYSAGFHHV-IQRGWSAFALDNDLKENDVCI 229
           +PS FA+K+L    + + L+ S+G  WH +  +G   V + +GW+ F  DN+L+E DVC+
Sbjct: 318 MPSRFAEKYLNGVSKFIKLQTSDGKQWHVRCLSGESRVKLSKGWTEFVKDNNLEEGDVCV 377

Query: 230 FELIDQKHITMKVSIIR 280
           FELI+ + + +KVSI R
Sbjct: 378 FELINMEDVVLKVSIFR 394


>emb|CBI32503.3| unnamed protein product [Vitis vinifera]
          Length = 355

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 32/77 (41%), Positives = 51/77 (66%), Gaps = 1/77 (1%)
 Frame = +2

Query: 53  LPSAFAKKFLKYAPREVTLRVSNGDTWHAQYSAGFHHV-IQRGWSAFALDNDLKENDVCI 229
           +PS FA+K+L    + + L+ S+G  WH +  +G   V + +GW+ F  DN+L+E DVC+
Sbjct: 266 MPSRFAEKYLNGVSKFIKLQTSDGKQWHVRCLSGESRVKLSKGWTEFVKDNNLEEGDVCV 325

Query: 230 FELIDQKHITMKVSIIR 280
           FELI+ + + +KVSI R
Sbjct: 326 FELINMEDVVLKVSIFR 342


>emb|CAN82369.1| hypothetical protein VITISV_027620 [Vitis vinifera]
          Length = 563

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 32/77 (41%), Positives = 51/77 (66%), Gaps = 1/77 (1%)
 Frame = +2

Query: 53  LPSAFAKKFLKYAPREVTLRVSNGDTWHAQYSAGFHHV-IQRGWSAFALDNDLKENDVCI 229
           +PS FA+K+L    + + L+ S+G  WH +  +G   V + +GW+ F  DN+L+E DVC+
Sbjct: 474 MPSRFAEKYLNGVSKFIKLQTSDGKQWHVRCLSGESRVKLSKGWTEFVKDNNLEEGDVCV 533

Query: 230 FELIDQKHITMKVSIIR 280
           FELI+ + + +KVSI R
Sbjct: 534 FELINMEDVVLKVSIFR 550


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