BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00026704
         (917 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulga...   182   6e-62
emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulga...   181   1e-61
emb|CAA66812.1| non-ltr retrotransposon reverse transcriptase-li...   167   3e-60
dbj|BAB01845.1| non-LTR retroelement reverse transcriptase-like ...   167   4e-60
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ...   176   5e-60

>emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1114

 Score =  182 bits (463), Expect(2) = 6e-62
 Identities = 86/199 (43%), Positives = 128/199 (64%)
 Frame = -2

Query: 895  ELIKEVTRDEIIECLSSIDSDKAPGSDGVSSLFFKAT*RVIGNDFVKAVKNFFRSVMMLQ 716
            +L++ +T  EI + L+ ID  KAPG DG +S+FFK +  VI  +  + + +FF +  M +
Sbjct: 436  QLVQPITIQEIDQALADIDDTKAPGLDGFNSVFFKKSWLVIKQEIYEGILDFFENGFMHK 495

Query: 715  EVNTTCITLIPKILKPSSLGDYRHIACCNVIYKCITKIMTRRMKIFMAQVISLNQSAFIS 536
             +N T +TLIPKI +     DYR IACC+ +YK I+KI+T+R++  + +V+   Q+ FI 
Sbjct: 496  PINCTAVTLIPKIDEAKHAKDYRPIACCSTLYKIISKILTKRLQAVITEVVDCAQTGFIP 555

Query: 535  SRSIHDNILLSHELIHNYHRNHGPPRCAAKIDLRKAYDTVRWEAVRFALIRIGVPLKFVK 356
             R I DNILL+ ELI  Y+R H  PRC  K+D+RKAYD+V W  +   L  +G P  F++
Sbjct: 556  ERHIGDNILLATELIRGYNRRHVSPRCVIKVDIRKAYDSVEWVFLESMLKELGFPSMFIR 615

Query: 355  WIQKCIETPRYSIMIYGTP 299
            WI  C++T  YSI++ G P
Sbjct: 616  WIMACVKTVSYSILLNGIP 634



 Score = 82.0 bits (201), Expect(2) = 6e-62
 Identities = 35/96 (36%), Positives = 57/96 (59%)
 Frame = -3

Query: 288 FKGKRGIRQGDPMSPYLFVLVMEFFTQMLRRKVEVGEYRLHYKCRNPLITHLSFADDLIA 109
           F  ++G+RQGDP+SP+LF L ME+ ++ +    +  E+  H KC    +THL FADDL+ 
Sbjct: 638 FDAQKGLRQGDPLSPFLFALSMEYLSRCMGNMCKDPEFNFHPKCERIKLTHLMFADDLLM 697

Query: 108 FINGDLDTVRALKETLSKLKKCSGLQVNFQKSNMFY 1
           F   D  ++  +    +   K SGLQ + +KS +++
Sbjct: 698 FARADASSISKIMAAFNSFSKASGLQASIEKSCIYF 733


>emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1110

 Score =  181 bits (460), Expect(2) = 1e-61
 Identities = 88/206 (42%), Positives = 126/206 (61%)
 Frame = -2

Query: 916  LDQNTQEELIKEVTRDEIIECLSSIDSDKAPGSDGVSSLFFKAT*RVIGNDFVKAVKNFF 737
            L    +E LI+EV   EI E L+ I +DKAPG DG ++ FFK +   I  +    ++ FF
Sbjct: 426  LSAQAKESLIREVASTEIDEALAGIGNDKAPGLDGFNAYFFKKSWGSIKQEIYAGIQEFF 485

Query: 736  RSVMMLQEVNTTCITLIPKILKPSSLGDYRHIACCNVIYKCITKIMTRRMKIFMAQVISL 557
             +  M + +N   +TL+PK+   + + ++R IACC VIYK I+K++T RMK  + +V++ 
Sbjct: 486  NNSRMHRPINCIVVTLLPKVQHATRVKEFRPIACCTVIYKIISKMLTNRMKGIIGEVVNE 545

Query: 556  NQSAFISSRSIHDNILLSHELIHNYHRNHGPPRCAAKIDLRKAYDTVRWEAVRFALIRIG 377
             QS FI  R I DNILL+ ELI  Y R H  PRC  K+D+RKAYD+V W  +   L   G
Sbjct: 546  AQSGFIPGRHIADNILLASELIRGYTRKHMSPRCIMKVDIRKAYDSVEWSFLETLLYEFG 605

Query: 376  VPLKFVKWIQKCIETPRYSIMIYGTP 299
             P +FV WI +C+ T  YS+++ G P
Sbjct: 606  FPSRFVGWIMECVSTVSYSVLVNGIP 631



 Score = 82.0 bits (201), Expect(2) = 1e-61
 Identities = 37/96 (38%), Positives = 56/96 (58%)
 Frame = -3

Query: 288 FKGKRGIRQGDPMSPYLFVLVMEFFTQMLRRKVEVGEYRLHYKCRNPLITHLSFADDLIA 109
           F+ ++G+RQGDPMSP+LF L ME+ ++ L       ++  H KC    ITHL FADDL+ 
Sbjct: 635 FQARKGLRQGDPMSPFLFALCMEYLSRCLEELKGSPDFNFHPKCERLNITHLMFADDLLM 694

Query: 108 FINGDLDTVRALKETLSKLKKCSGLQVNFQKSNMFY 1
           F   D  ++  +     K    SGL  + +KSN+++
Sbjct: 695 FCRADKSSLDHMNVAFQKFSHASGLAASHEKSNIYF 730


>emb|CAA66812.1| non-ltr retrotransposon reverse transcriptase-like protein
            [Arabidopsis thaliana]
          Length = 893

 Score =  167 bits (422), Expect(2) = 3e-60
 Identities = 82/189 (43%), Positives = 123/189 (65%)
 Frame = -2

Query: 868  EIIECLSSIDSDKAPGSDGVSSLFFKAT*RVIGNDFVKAVKNFFRSVMMLQEVNTTCITL 689
            +I E   S+  +KA G DG SS FFK    V+G +  +AV+ FFRS  +L++ N T + L
Sbjct: 452  DIQEAFFSLPRNKASGPDGYSSEFFKGVWFVVGPEVTEAVQEFFRSGQLLKQWNATTLVL 511

Query: 688  IPKILKPSSLGDYRHIACCNVIYKCITKIMTRRMKIFMAQVISLNQSAFISSRSIHDNIL 509
            IPKI   S + D+R I+C N +YK I K++T R+K  + +VIS +QSAF+  R + +N+L
Sbjct: 512  IPKITNSSKMTDFRPISCLNTLYKVIAKLLTSRLKKLLNEVISPSQSAFLPGRLLSENVL 571

Query: 508  LSHELIHNYHRNHGPPRCAAKIDLRKAYDTVRWEAVRFALIRIGVPLKFVKWIQKCIETP 329
            L+ E++H Y+  +   R   K+DLRKA+D+VRW+ +  A   + VP KFV WI +CI TP
Sbjct: 572  LATEIVHGYNTKNISSRGMLKVDLRKAFDSVRWDFIISAFRALAVPEKFVCWINQCISTP 631

Query: 328  RYSIMIYGT 302
             +S+M+ G+
Sbjct: 632  YFSVMVNGS 640



 Score = 92.0 bits (227), Expect(2) = 3e-60
 Identities = 41/97 (42%), Positives = 62/97 (63%)
 Frame = -3

Query: 294 GYFKGKRGIRQGDPMSPYLFVLVMEFFTQMLRRKVEVGEYRLHYKCRNPLITHLSFADDL 115
           G+FK  +G+RQGDP+SPYLFVL ME F+ +L+ + + G  + H K  +  I+HL FADD+
Sbjct: 643 GFFKSNKGLRQGDPLSPYLFVLAMEVFSSLLKARFDAGYIQYHPKTADLSISHLMFADDV 702

Query: 114 IAFINGDLDTVRALKETLSKLKKCSGLQVNFQKSNMF 4
           + F +G   ++  + E L      SGL VN  K+N++
Sbjct: 703 MVFFDGGSSSLHGISEALDDFASWSGLHVNKDKTNLY 739


>dbj|BAB01845.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
            thaliana]
          Length = 893

 Score =  167 bits (422), Expect(2) = 4e-60
 Identities = 82/189 (43%), Positives = 123/189 (65%)
 Frame = -2

Query: 868  EIIECLSSIDSDKAPGSDGVSSLFFKAT*RVIGNDFVKAVKNFFRSVMMLQEVNTTCITL 689
            +I E   S+  +KA G DG SS FFK    V+G +  +AV+ FFRS  +L++ N T + L
Sbjct: 452  DIQEAFFSLPRNKASGPDGYSSEFFKGVWFVVGPEVTEAVQEFFRSGQLLKQWNATTLVL 511

Query: 688  IPKILKPSSLGDYRHIACCNVIYKCITKIMTRRMKIFMAQVISLNQSAFISSRSIHDNIL 509
            IPKI   S + D+R I+C N +YK I K++T R+K  + +VIS +QSAF+  R + +N+L
Sbjct: 512  IPKITNSSKMTDFRPISCLNTLYKVIAKLLTSRLKKLLNEVISPSQSAFLPGRLLSENVL 571

Query: 508  LSHELIHNYHRNHGPPRCAAKIDLRKAYDTVRWEAVRFALIRIGVPLKFVKWIQKCIETP 329
            L+ E++H Y+  +   R   K+DLRKA+D+VRW+ +  A   + VP KFV WI +CI TP
Sbjct: 572  LATEIVHGYNTKNISSRGMLKVDLRKAFDSVRWDFIISAFRALAVPEKFVCWINQCISTP 631

Query: 328  RYSIMIYGT 302
             +S+M+ G+
Sbjct: 632  YFSVMVNGS 640



 Score = 91.7 bits (226), Expect(2) = 4e-60
 Identities = 41/97 (42%), Positives = 61/97 (62%)
 Frame = -3

Query: 294 GYFKGKRGIRQGDPMSPYLFVLVMEFFTQMLRRKVEVGEYRLHYKCRNPLITHLSFADDL 115
           G+FK  +G+RQGDP+SPYLFVL ME F+ +L+ + + G    H K  +  I+HL FADD+
Sbjct: 643 GFFKSNKGLRQGDPLSPYLFVLAMEVFSSLLKARFDAGYIHYHPKTADLSISHLMFADDV 702

Query: 114 IAFINGDLDTVRALKETLSKLKKCSGLQVNFQKSNMF 4
           + F +G   ++  + E L      SGL VN  K+N++
Sbjct: 703 MVFFDGGSSSLHGISEALDDFASWSGLHVNKDKTNLY 739


>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
            thaliana]
          Length = 1223

 Score =  176 bits (445), Expect(2) = 5e-60
 Identities = 84/199 (42%), Positives = 132/199 (66%)
 Frame = -2

Query: 901  QEELIKEVTRDEIIECLSSIDSDKAPGSDGVSSLFFKAT*RVIGNDFVKAVKNFFRSVMM 722
            Q+ LI+ VT +EI + L  + SDK+PG DG +S FFKAT  +IG++F  AV++FF    +
Sbjct: 446  QQSLIRPVTAEEIRKVLFRMPSDKSPGPDGYTSEFFKATWEIIGDEFTLAVQSFFTKGFL 505

Query: 721  LQEVNTTCITLIPKILKPSSLGDYRHIACCNVIYKCITKIMTRRMKIFMAQVISLNQSAF 542
             + +N+T + LIPK  +   + DYR I+CCNV+YK I+KI+  R+K+ + + I+ NQSAF
Sbjct: 506  PKGINSTILALIPKKTEAREMKDYRPISCCNVLYKVISKIIANRLKLVLPKFIAGNQSAF 565

Query: 541  ISSRSIHDNILLSHELIHNYHRNHGPPRCAAKIDLRKAYDTVRWEAVRFALIRIGVPLKF 362
            +  R + +N+LL+ EL+ +YH++    RCA KID+ KA+D+V+W  +      +G P +F
Sbjct: 566  VKDRLLIENLLLATELVKDYHKDTISTRCAIKIDISKAFDSVQWPFLINVFTILGFPREF 625

Query: 361  VKWIQKCIETPRYSIMIYG 305
            + WI  CI T  +S+ + G
Sbjct: 626  IHWINICITTASFSVQVNG 644



 Score = 82.4 bits (202), Expect(2) = 5e-60
 Identities = 36/97 (37%), Positives = 61/97 (62%)
 Frame = -3

Query: 294 GYFKGKRGIRQGDPMSPYLFVLVMEFFTQMLRRKVEVGEYRLHYKCRNPLITHLSFADDL 115
           GYF+  RG+RQG  +SPYLFV+ M+  ++ML +      +  H KC+   +THLSFADDL
Sbjct: 648 GYFQSSRGLRQGCALSPYLFVICMDVLSKMLDKAAAARHFGYHPKCKTMGLTHLSFADDL 707

Query: 114 IAFINGDLDTVRALKETLSKLKKCSGLQVNFQKSNMF 4
           +   +G + ++  + +   +  K SGL+++ +KS ++
Sbjct: 708 MVLSDGKIRSIERIIKVFDEFAKWSGLRISLEKSTVY 744