BLASTX nr result

ID: Coptis21_contig00026680 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00026680
         (338 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326594.1| predicted protein [Populus trichocarpa] gi|2...    57   1e-06

>ref|XP_002326594.1| predicted protein [Populus trichocarpa] gi|222833916|gb|EEE72393.1|
           predicted protein [Populus trichocarpa]
          Length = 477

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 34/97 (35%), Positives = 53/97 (54%), Gaps = 5/97 (5%)
 Frame = -1

Query: 338 DIWVVQDYNGKMSWNKQFSVRRYLVHPSPG-----GLIRPVQVLKNGEILLKCGFSRLVA 174
           DIWV++ Y  + SW K+F ++    +PS        L RP+ +L NGEIL+      +V+
Sbjct: 300 DIWVMKQYGVQESWTKEFILK----NPSTDIIWYWDLYRPISLLSNGEILMSHKSKAMVS 355

Query: 173 YNTKSKKCRSLKIGKKFGNFEPFPFVASLISVKSVCR 63
           YN + +  R LKI     NFE  P+V S +S + + +
Sbjct: 356 YNPEDRSFRFLKI-YGIQNFEANPYVPSFLSPREIVK 391


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