BLASTX nr result

ID: Coptis21_contig00026673 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00026673
         (314 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN74166.1| hypothetical protein VITISV_007721 [Vitis vinifera]    46   2e-07
emb|CAN66863.1| hypothetical protein VITISV_013500 [Vitis vinifera]    40   4e-07
emb|CAN78447.1| hypothetical protein VITISV_026810 [Vitis vinifera]    44   4e-06

>emb|CAN74166.1| hypothetical protein VITISV_007721 [Vitis vinifera]
          Length = 631

 Score = 45.8 bits (107), Expect(2) = 2e-07
 Identities = 22/39 (56%), Positives = 26/39 (66%)
 Frame = -3

Query: 165 KASTCFNVSSGQVSFPSLAFSGIKTNANIWHQRLGHPAF 49
           K +T   V+   VS P LAFS +KT  + WHQRLGHPAF
Sbjct: 117 KGNTKDGVNEWPVSPPLLAFSSLKTTLSEWHQRLGHPAF 155



 Score = 33.9 bits (76), Expect(2) = 2e-07
 Identities = 17/37 (45%), Positives = 23/37 (62%)
 Frame = -2

Query: 313 FIKDNNCSMIFCPNHFVVKDNVMGKTLLQGRTKNGLS 203
           F   NN S+ F P   +VKD   G TLL+G TK+G++
Sbjct: 89  FGTSNNVSIEFLPTALLVKDIQTGITLLKGNTKDGVN 125


>emb|CAN66863.1| hypothetical protein VITISV_013500 [Vitis vinifera]
          Length = 1112

 Score = 40.0 bits (92), Expect(2) = 4e-07
 Identities = 20/36 (55%), Positives = 24/36 (66%)
 Frame = -2

Query: 313 FIKDNNCSMIFCPNHFVVKDNVMGKTLLQGRTKNGL 206
           F K NN S+ F P+ F VKD   G  LLQGRTK+G+
Sbjct: 231 FCKSNNTSIEFLPSSFHVKDLHTGAILLQGRTKDGV 266



 Score = 38.5 bits (88), Expect(2) = 4e-07
 Identities = 15/27 (55%), Positives = 19/27 (70%)
 Frame = -3

Query: 126 SFPSLAFSGIKTNANIWHQRLGHPAFS 46
           S P +AFS +KT  + WH RLGHP+ S
Sbjct: 276 SXPLIAFSSVKTTLSEWHHRLGHPSLS 302


>emb|CAN78447.1| hypothetical protein VITISV_026810 [Vitis vinifera]
          Length = 1171

 Score = 43.5 bits (101), Expect(2) = 4e-06
 Identities = 20/36 (55%), Positives = 24/36 (66%)
 Frame = -2

Query: 313 FIKDNNCSMIFCPNHFVVKDNVMGKTLLQGRTKNGL 206
           F  DNNC  I   N FVVK+N+ G+ LLQG  +NGL
Sbjct: 396 FCLDNNCYFILTANGFVVKENLTGRILLQGVVENGL 431



 Score = 32.0 bits (71), Expect(2) = 4e-06
 Identities = 10/17 (58%), Positives = 14/17 (82%)
 Frame = -3

Query: 102 GIKTNANIWHQRLGHPA 52
           G++ NA+ WH RLGHP+
Sbjct: 452 GVRANADTWHSRLGHPS 468


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