BLASTX nr result
ID: Coptis21_contig00026673
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00026673 (314 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN74166.1| hypothetical protein VITISV_007721 [Vitis vinifera] 46 2e-07 emb|CAN66863.1| hypothetical protein VITISV_013500 [Vitis vinifera] 40 4e-07 emb|CAN78447.1| hypothetical protein VITISV_026810 [Vitis vinifera] 44 4e-06 >emb|CAN74166.1| hypothetical protein VITISV_007721 [Vitis vinifera] Length = 631 Score = 45.8 bits (107), Expect(2) = 2e-07 Identities = 22/39 (56%), Positives = 26/39 (66%) Frame = -3 Query: 165 KASTCFNVSSGQVSFPSLAFSGIKTNANIWHQRLGHPAF 49 K +T V+ VS P LAFS +KT + WHQRLGHPAF Sbjct: 117 KGNTKDGVNEWPVSPPLLAFSSLKTTLSEWHQRLGHPAF 155 Score = 33.9 bits (76), Expect(2) = 2e-07 Identities = 17/37 (45%), Positives = 23/37 (62%) Frame = -2 Query: 313 FIKDNNCSMIFCPNHFVVKDNVMGKTLLQGRTKNGLS 203 F NN S+ F P +VKD G TLL+G TK+G++ Sbjct: 89 FGTSNNVSIEFLPTALLVKDIQTGITLLKGNTKDGVN 125 >emb|CAN66863.1| hypothetical protein VITISV_013500 [Vitis vinifera] Length = 1112 Score = 40.0 bits (92), Expect(2) = 4e-07 Identities = 20/36 (55%), Positives = 24/36 (66%) Frame = -2 Query: 313 FIKDNNCSMIFCPNHFVVKDNVMGKTLLQGRTKNGL 206 F K NN S+ F P+ F VKD G LLQGRTK+G+ Sbjct: 231 FCKSNNTSIEFLPSSFHVKDLHTGAILLQGRTKDGV 266 Score = 38.5 bits (88), Expect(2) = 4e-07 Identities = 15/27 (55%), Positives = 19/27 (70%) Frame = -3 Query: 126 SFPSLAFSGIKTNANIWHQRLGHPAFS 46 S P +AFS +KT + WH RLGHP+ S Sbjct: 276 SXPLIAFSSVKTTLSEWHHRLGHPSLS 302 >emb|CAN78447.1| hypothetical protein VITISV_026810 [Vitis vinifera] Length = 1171 Score = 43.5 bits (101), Expect(2) = 4e-06 Identities = 20/36 (55%), Positives = 24/36 (66%) Frame = -2 Query: 313 FIKDNNCSMIFCPNHFVVKDNVMGKTLLQGRTKNGL 206 F DNNC I N FVVK+N+ G+ LLQG +NGL Sbjct: 396 FCLDNNCYFILTANGFVVKENLTGRILLQGVVENGL 431 Score = 32.0 bits (71), Expect(2) = 4e-06 Identities = 10/17 (58%), Positives = 14/17 (82%) Frame = -3 Query: 102 GIKTNANIWHQRLGHPA 52 G++ NA+ WH RLGHP+ Sbjct: 452 GVRANADTWHSRLGHPS 468