BLASTX nr result

ID: Coptis21_contig00026671 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00026671
         (604 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318134.1| predicted protein [Populus trichocarpa] gi|1...    51   5e-09
ref|XP_002283991.1| PREDICTED: uncharacterized protein LOC100264...    44   1e-07
ref|XP_002511168.1| conserved hypothetical protein [Ricinus comm...    56   6e-06

>ref|XP_002318134.1| predicted protein [Populus trichocarpa] gi|118486707|gb|ABK95190.1|
           unknown [Populus trichocarpa]
           gi|222858807|gb|EEE96354.1| predicted protein [Populus
           trichocarpa]
          Length = 185

 Score = 51.2 bits (121), Expect(2) = 5e-09
 Identities = 28/51 (54%), Positives = 32/51 (62%), Gaps = 4/51 (7%)
 Frame = -3

Query: 569 TTGKSSTTQELGIEGQKHLE----AAHHIHSSMDHELCNPAPWYAAAHSNN 429
           T   S TTQEL IEGQKHLE    AA+ I SSM+ ELCNP  W   + S +
Sbjct: 12  TPQHSKTTQELAIEGQKHLEETIQAAYQILSSMNDELCNPTLWSTTSTSTS 62



 Score = 34.7 bits (78), Expect(2) = 5e-09
 Identities = 18/37 (48%), Positives = 24/37 (64%)
 Frame = -1

Query: 421 SDSYLHNNTNFDMPGGALDDAHLRYKSTVASSRSVLS 311
           SDS L  N    +  GALD+A  RYK++VA+ R VL+
Sbjct: 83  SDSTLELNGGGGVGNGALDEARFRYKNSVAALRDVLA 119


>ref|XP_002283991.1| PREDICTED: uncharacterized protein LOC100264705 [Vitis vinifera]
           gi|147789866|emb|CAN73869.1| hypothetical protein
           VITISV_001275 [Vitis vinifera]
           gi|297734439|emb|CBI15686.3| unnamed protein product
           [Vitis vinifera]
          Length = 174

 Score = 43.5 bits (101), Expect(2) = 1e-07
 Identities = 22/36 (61%), Positives = 25/36 (69%), Gaps = 4/36 (11%)
 Frame = -3

Query: 548 TQELGIEGQKHLE----AAHHIHSSMDHELCNPAPW 453
           TQEL +EGQKHLE    +A  I SSM+ ELCNP  W
Sbjct: 9   TQELALEGQKHLEETIESAFQILSSMNDELCNPTLW 44



 Score = 38.1 bits (87), Expect(2) = 1e-07
 Identities = 18/23 (78%), Positives = 21/23 (91%)
 Frame = -1

Query: 379 GGALDDAHLRYKSTVASSRSVLS 311
           GGALDDA LRYKS+VAS R+VL+
Sbjct: 79  GGALDDARLRYKSSVASLRAVLN 101


>ref|XP_002511168.1| conserved hypothetical protein [Ricinus communis]
           gi|223550283|gb|EEF51770.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 196

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 29/52 (55%), Positives = 35/52 (67%), Gaps = 4/52 (7%)
 Frame = -3

Query: 572 NTTGKSSTTQELGIEGQKHLE----AAHHIHSSMDHELCNPAPWYAAAHSNN 429
           +T  +S TTQEL +EGQKHLE    AA+ I SSM+ ELCNP  W   + SNN
Sbjct: 7   STITQSKTTQELAMEGQKHLEETIQAAYQILSSMNDELCNPTLWSTTSSSNN 58


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