BLASTX nr result
ID: Coptis21_contig00026671
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00026671 (604 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002318134.1| predicted protein [Populus trichocarpa] gi|1... 51 5e-09 ref|XP_002283991.1| PREDICTED: uncharacterized protein LOC100264... 44 1e-07 ref|XP_002511168.1| conserved hypothetical protein [Ricinus comm... 56 6e-06 >ref|XP_002318134.1| predicted protein [Populus trichocarpa] gi|118486707|gb|ABK95190.1| unknown [Populus trichocarpa] gi|222858807|gb|EEE96354.1| predicted protein [Populus trichocarpa] Length = 185 Score = 51.2 bits (121), Expect(2) = 5e-09 Identities = 28/51 (54%), Positives = 32/51 (62%), Gaps = 4/51 (7%) Frame = -3 Query: 569 TTGKSSTTQELGIEGQKHLE----AAHHIHSSMDHELCNPAPWYAAAHSNN 429 T S TTQEL IEGQKHLE AA+ I SSM+ ELCNP W + S + Sbjct: 12 TPQHSKTTQELAIEGQKHLEETIQAAYQILSSMNDELCNPTLWSTTSTSTS 62 Score = 34.7 bits (78), Expect(2) = 5e-09 Identities = 18/37 (48%), Positives = 24/37 (64%) Frame = -1 Query: 421 SDSYLHNNTNFDMPGGALDDAHLRYKSTVASSRSVLS 311 SDS L N + GALD+A RYK++VA+ R VL+ Sbjct: 83 SDSTLELNGGGGVGNGALDEARFRYKNSVAALRDVLA 119 >ref|XP_002283991.1| PREDICTED: uncharacterized protein LOC100264705 [Vitis vinifera] gi|147789866|emb|CAN73869.1| hypothetical protein VITISV_001275 [Vitis vinifera] gi|297734439|emb|CBI15686.3| unnamed protein product [Vitis vinifera] Length = 174 Score = 43.5 bits (101), Expect(2) = 1e-07 Identities = 22/36 (61%), Positives = 25/36 (69%), Gaps = 4/36 (11%) Frame = -3 Query: 548 TQELGIEGQKHLE----AAHHIHSSMDHELCNPAPW 453 TQEL +EGQKHLE +A I SSM+ ELCNP W Sbjct: 9 TQELALEGQKHLEETIESAFQILSSMNDELCNPTLW 44 Score = 38.1 bits (87), Expect(2) = 1e-07 Identities = 18/23 (78%), Positives = 21/23 (91%) Frame = -1 Query: 379 GGALDDAHLRYKSTVASSRSVLS 311 GGALDDA LRYKS+VAS R+VL+ Sbjct: 79 GGALDDARLRYKSSVASLRAVLN 101 >ref|XP_002511168.1| conserved hypothetical protein [Ricinus communis] gi|223550283|gb|EEF51770.1| conserved hypothetical protein [Ricinus communis] Length = 196 Score = 55.8 bits (133), Expect = 6e-06 Identities = 29/52 (55%), Positives = 35/52 (67%), Gaps = 4/52 (7%) Frame = -3 Query: 572 NTTGKSSTTQELGIEGQKHLE----AAHHIHSSMDHELCNPAPWYAAAHSNN 429 +T +S TTQEL +EGQKHLE AA+ I SSM+ ELCNP W + SNN Sbjct: 7 STITQSKTTQELAMEGQKHLEETIQAAYQILSSMNDELCNPTLWSTTSSSNN 58