BLASTX nr result

ID: Coptis21_contig00026661 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00026661
         (1081 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278512.2| PREDICTED: promoter-binding protein SPL9 [Vi...   302   1e-79
gb|ADG36380.1| promoter-binding protein SPL9 [Vitis vinifera]         302   1e-79
emb|CBI30036.3| unnamed protein product [Vitis vinifera]              302   1e-79
ref|XP_002532343.1| LIGULELESS1 protein, putative [Ricinus commu...   283   4e-74
gb|AEW23126.1| SQUAMOSA promoter binding protein-like protein [F...   266   7e-69

>ref|XP_002278512.2| PREDICTED: promoter-binding protein SPL9 [Vitis vinifera]
          Length = 379

 Score =  302 bits (773), Expect = 1e-79
 Identities = 160/262 (61%), Positives = 175/262 (66%), Gaps = 6/262 (2%)
 Frame = +2

Query: 2   RFHLLTEFDQGKRSCRRRLAGHNERRRKPQPGSLFSSRYGRLSPSFQENSSR-GGGFLMD 178
           RFH L EFDQGKRSCRRRLAGHNERRRKP PGSL SSRYGRLS S  ENSSR GGGFLMD
Sbjct: 128 RFHQLAEFDQGKRSCRRRLAGHNERRRKPPPGSLLSSRYGRLSSSIFENSSRVGGGFLMD 187

Query: 179 FT---RQPGRDEWPIVKTGNWADGNQPTPTGKLLPQQWQGDPENPPAIVYSQSSQPYLQG 349
           F    R P RD WP  +  +   GNQ T  G+ LP  WQ + ENP           +LQG
Sbjct: 188 FAAYPRHPERDTWPTTRASDRVPGNQTTAMGRFLPHPWQSNSENP----------LFLQG 237

Query: 350 AVGGTVFSSTRIPSGECFAGVSDSSCALSLLSNQPWGPRSHTSXXXXXXXXXGEGTSMAQ 529
           + GGT F    IPSGECF G SDSSCALSLLSNQPW  R+  S          EG SMAQ
Sbjct: 238 SAGGTSFHGPGIPSGECFTGASDSSCALSLLSNQPWSSRNRASGLGANSFMNPEGASMAQ 297

Query: 530 STATHSAAV--FTSNSWSFKGNEVGGSSQEMPRDFGLGQVSQSMNNHFSGELEMAQQGDR 703
            TA HSAA+  F S SW FKGNE   SSQEMP D GLGQ+SQ +N+ FSG  E+ QQ  R
Sbjct: 298 PTAPHSAAINHFPSTSWDFKGNEGSSSSQEMPPDLGLGQISQPINSQFSGGGELPQQSGR 357

Query: 704 QYVELGNSRGYGSSTRQAHWSL 769
           QY+EL +SR Y SST+Q HWSL
Sbjct: 358 QYMELEHSRAYDSSTQQMHWSL 379


>gb|ADG36380.1| promoter-binding protein SPL9 [Vitis vinifera]
          Length = 378

 Score =  302 bits (773), Expect = 1e-79
 Identities = 160/262 (61%), Positives = 175/262 (66%), Gaps = 6/262 (2%)
 Frame = +2

Query: 2   RFHLLTEFDQGKRSCRRRLAGHNERRRKPQPGSLFSSRYGRLSPSFQENSSR-GGGFLMD 178
           RFH L EFDQGKRSCRRRLAGHNERRRKP PGSL SSRYGRLS S  ENSSR GGGFLMD
Sbjct: 127 RFHQLAEFDQGKRSCRRRLAGHNERRRKPPPGSLLSSRYGRLSSSIFENSSRVGGGFLMD 186

Query: 179 FT---RQPGRDEWPIVKTGNWADGNQPTPTGKLLPQQWQGDPENPPAIVYSQSSQPYLQG 349
           F    R P RD WP  +  +   GNQ T  G+ LP  WQ + ENP           +LQG
Sbjct: 187 FAAYPRHPERDTWPTTRASDRVPGNQTTAMGRFLPHPWQSNSENP----------LFLQG 236

Query: 350 AVGGTVFSSTRIPSGECFAGVSDSSCALSLLSNQPWGPRSHTSXXXXXXXXXGEGTSMAQ 529
           + GGT F    IPSGECF G SDSSCALSLLSNQPW  R+  S          EG SMAQ
Sbjct: 237 SAGGTSFHGPGIPSGECFTGASDSSCALSLLSNQPWSSRNRASGLGANSFMNPEGASMAQ 296

Query: 530 STATHSAAV--FTSNSWSFKGNEVGGSSQEMPRDFGLGQVSQSMNNHFSGELEMAQQGDR 703
            TA HSAA+  F S SW FKGNE   SSQEMP D GLGQ+SQ +N+ FSG  E+ QQ  R
Sbjct: 297 PTAPHSAAINHFPSTSWDFKGNEGSSSSQEMPPDLGLGQISQPINSQFSGGGELPQQSGR 356

Query: 704 QYVELGNSRGYGSSTRQAHWSL 769
           QY+EL +SR Y SST+Q HWSL
Sbjct: 357 QYMELEHSRAYDSSTQQMHWSL 378


>emb|CBI30036.3| unnamed protein product [Vitis vinifera]
          Length = 349

 Score =  302 bits (773), Expect = 1e-79
 Identities = 160/262 (61%), Positives = 175/262 (66%), Gaps = 6/262 (2%)
 Frame = +2

Query: 2   RFHLLTEFDQGKRSCRRRLAGHNERRRKPQPGSLFSSRYGRLSPSFQENSSR-GGGFLMD 178
           RFH L EFDQGKRSCRRRLAGHNERRRKP PGSL SSRYGRLS S  ENSSR GGGFLMD
Sbjct: 98  RFHQLAEFDQGKRSCRRRLAGHNERRRKPPPGSLLSSRYGRLSSSIFENSSRVGGGFLMD 157

Query: 179 FT---RQPGRDEWPIVKTGNWADGNQPTPTGKLLPQQWQGDPENPPAIVYSQSSQPYLQG 349
           F    R P RD WP  +  +   GNQ T  G+ LP  WQ + ENP           +LQG
Sbjct: 158 FAAYPRHPERDTWPTTRASDRVPGNQTTAMGRFLPHPWQSNSENP----------LFLQG 207

Query: 350 AVGGTVFSSTRIPSGECFAGVSDSSCALSLLSNQPWGPRSHTSXXXXXXXXXGEGTSMAQ 529
           + GGT F    IPSGECF G SDSSCALSLLSNQPW  R+  S          EG SMAQ
Sbjct: 208 SAGGTSFHGPGIPSGECFTGASDSSCALSLLSNQPWSSRNRASGLGANSFMNPEGASMAQ 267

Query: 530 STATHSAAV--FTSNSWSFKGNEVGGSSQEMPRDFGLGQVSQSMNNHFSGELEMAQQGDR 703
            TA HSAA+  F S SW FKGNE   SSQEMP D GLGQ+SQ +N+ FSG  E+ QQ  R
Sbjct: 268 PTAPHSAAINHFPSTSWDFKGNEGSSSSQEMPPDLGLGQISQPINSQFSGGGELPQQSGR 327

Query: 704 QYVELGNSRGYGSSTRQAHWSL 769
           QY+EL +SR Y SST+Q HWSL
Sbjct: 328 QYMELEHSRAYDSSTQQMHWSL 349


>ref|XP_002532343.1| LIGULELESS1 protein, putative [Ricinus communis]
           gi|223527960|gb|EEF30045.1| LIGULELESS1 protein,
           putative [Ricinus communis]
          Length = 349

 Score =  283 bits (725), Expect = 4e-74
 Identities = 149/263 (56%), Positives = 173/263 (65%), Gaps = 7/263 (2%)
 Frame = +2

Query: 2   RFHLLTEFDQGKRSCRRRLAGHNERRRKPQPGSLFSSRYGRLSPSFQENSSRGGGFLMDF 181
           RFH L EFDQGKRSCRRRLAGHNERRRKP PGSL SSRY RLS +  +NSSR GGFL+DF
Sbjct: 94  RFHQLPEFDQGKRSCRRRLAGHNERRRKPPPGSLLSSRYSRLSSTVFDNSSRAGGFLVDF 153

Query: 182 TRQP---GRDEWPIVKTGNWADGNQPTPTGKLLPQQWQGDPENPPAIVYSQSSQPYLQGA 352
           +  P    RD WP  +      GN  T  G+ +P  WQ   +NPP       S  YLQG+
Sbjct: 154 SAYPRLSARDAWPSARPSERVPGNHTTGAGRSIPNPWQTSSQNPP-------SNLYLQGS 206

Query: 353 VGGTVFSSTRIPSGECFAGVS--DSSCALSLLSNQPWGPRSHTSXXXXXXXXXGEGTSMA 526
             GT FSS+  PSGECF GVS  DSSCALSLLSNQPWG R+  S          +G  +A
Sbjct: 207 ASGTGFSSSENPSGECFTGVSIADSSCALSLLSNQPWGSRNQASGLGVKNLVDPQGAPLA 266

Query: 527 QSTATHSAAV--FTSNSWSFKGNEVGGSSQEMPRDFGLGQVSQSMNNHFSGELEMAQQGD 700
           QST  H AAV  + + SW FKG+E G SS EM  D GLGQ+SQ  N HF+GELE++QQ  
Sbjct: 267 QSTNPHGAAVNQYPNPSWGFKGSEAGSSSHEMCPDLGLGQISQPPNGHFAGELELSQQNR 326

Query: 701 RQYVELGNSRGYGSSTRQAHWSL 769
           RQY+EL +SR Y SST+  +WSL
Sbjct: 327 RQYMELDHSRAYDSSTQHMNWSL 349


>gb|AEW23126.1| SQUAMOSA promoter binding protein-like protein [Fragaria x
           ananassa]
          Length = 380

 Score =  266 bits (680), Expect = 7e-69
 Identities = 148/265 (55%), Positives = 170/265 (64%), Gaps = 9/265 (3%)
 Frame = +2

Query: 2   RFHLLTEFDQGKRSCRRRLAGHNERRRKPQPGSLFSSRYGRLSPSFQENSSRGGGFLMDF 181
           RFH L EFDQGKRSCRRRLAGHNERRRKPQPGS+ S+R+GRLS S  ENS++ G FLMDF
Sbjct: 125 RFHQLPEFDQGKRSCRRRLAGHNERRRKPQPGSMMSTRFGRLSSSIYENSNQVGSFLMDF 184

Query: 182 TRQP--GRDEWPIVKTGNWADGNQP-TPTGKLLPQQWQGDPENPPAIVYSQSSQPYLQGA 352
           T  P  GRD W   +T      NQ  T TGK L  QWQ +PEN         S  YLQG+
Sbjct: 185 TAYPRDGRDAWATARTSERPPANQTVTATGKFLQHQWQSNPEN-------NRSNLYLQGS 237

Query: 353 VGGTVFSSTRIPSGECFAGVSDSSCALSLLSNQPWGPRSHTSXXXXXXXXXGEGTSMAQS 532
            GGT +    IP GEC  GV+DSSCALSLLS+QPW  R+             +G  MAQS
Sbjct: 238 AGGTSYPGPGIPPGECVTGVTDSSCALSLLSSQPWASRNR--GVGTNAFLNTQGAPMAQS 295

Query: 533 TATHSAA-VFTSNSWSFKGNEVGGSSQEMPRDFGLGQVSQSMNNHFSGELEMAQQGDRQY 709
            A       F + SW FKGNE G SS EM  D GLGQ SQ +N+H+SGELE++QQG RQ 
Sbjct: 296 IANAGPVNPFPTTSWGFKGNEAGSSSHEMLPDLGLGQFSQPLNSHYSGELELSQQGRRQQ 355

Query: 710 -VELGNSRGYG----SSTRQAHWSL 769
            +EL NSRGY     SS++Q HWSL
Sbjct: 356 NMELRNSRGYSRGYDSSSQQIHWSL 380


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