BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00026654
         (726 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containi...   168   9e-40
emb|CBI30711.3| unnamed protein product [Vitis vinifera]              168   9e-40
ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containi...   162   7e-38
ref|XP_003547177.1| PREDICTED: pentatricopeptide repeat-containi...   158   9e-37
gb|ACD56635.1| putative pentatricopeptide repeat protein [Gossyp...   158   1e-36

>ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
            chloroplastic-like [Vitis vinifera]
          Length = 824

 Score =  168 bits (426), Expect = 9e-40
 Identities = 78/97 (80%), Positives = 85/97 (87%)
 Frame = -2

Query: 725  MKEEGCLPDNRYALIIAGDTEKEEVLCGHSEKLAMAYGILNLPYGKTVRVTKNLRVCGDC 546
            MKEEG  P  RYALI A DTEKE  LCGHSEK+AMA+GIL+LP GKTVRVTKNLRVCGDC
Sbjct: 728  MKEEGHFPKMRYALIKADDTEKEMALCGHSEKIAMAFGILSLPPGKTVRVTKNLRVCGDC 787

Query: 545  HEMAKFMSKMFAKEIVLRDSNRFHHFKDGRCSCRGYW 435
            HEMAKFMSKM  ++I+LRDSNRFHHFKDG CSCRG+W
Sbjct: 788  HEMAKFMSKMVKRDIILRDSNRFHHFKDGSCSCRGHW 824


>emb|CBI30711.3| unnamed protein product [Vitis vinifera]
          Length = 697

 Score =  168 bits (426), Expect = 9e-40
 Identities = 78/97 (80%), Positives = 85/97 (87%)
 Frame = -2

Query: 725 MKEEGCLPDNRYALIIAGDTEKEEVLCGHSEKLAMAYGILNLPYGKTVRVTKNLRVCGDC 546
           MKEEG  P  RYALI A DTEKE  LCGHSEK+AMA+GIL+LP GKTVRVTKNLRVCGDC
Sbjct: 601 MKEEGHFPKMRYALIKADDTEKEMALCGHSEKIAMAFGILSLPPGKTVRVTKNLRVCGDC 660

Query: 545 HEMAKFMSKMFAKEIVLRDSNRFHHFKDGRCSCRGYW 435
           HEMAKFMSKM  ++I+LRDSNRFHHFKDG CSCRG+W
Sbjct: 661 HEMAKFMSKMVKRDIILRDSNRFHHFKDGSCSCRGHW 697


>ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
            chloroplastic-like [Cucumis sativus]
            gi|449500809|ref|XP_004161200.1| PREDICTED:
            pentatricopeptide repeat-containing protein At4g18750,
            chloroplastic-like [Cucumis sativus]
          Length = 926

 Score =  162 bits (410), Expect = 7e-38
 Identities = 74/97 (76%), Positives = 83/97 (85%)
 Frame = -2

Query: 725  MKEEGCLPDNRYALIIAGDTEKEEVLCGHSEKLAMAYGILNLPYGKTVRVTKNLRVCGDC 546
            MKEEG  P   YAL+ A + EKE  LCGHSEKLAMA+G+LNLP GKT+RVTKNLRVCGDC
Sbjct: 830  MKEEGYSPKTAYALLNADEREKEVALCGHSEKLAMAFGMLNLPPGKTIRVTKNLRVCGDC 889

Query: 545  HEMAKFMSKMFAKEIVLRDSNRFHHFKDGRCSCRGYW 435
            HEMAKFMSK  ++EI+LRDS+RFHHFKDG CSCRGYW
Sbjct: 890  HEMAKFMSKSASREIILRDSSRFHHFKDGSCSCRGYW 926


>ref|XP_003547177.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
            chloroplastic-like [Glycine max]
          Length = 1227

 Score =  158 bits (400), Expect = 9e-37
 Identities = 74/97 (76%), Positives = 80/97 (82%)
 Frame = -2

Query: 725  MKEEGCLPDNRYALIIAGDTEKEEVLCGHSEKLAMAYGILNLPYGKTVRVTKNLRVCGDC 546
            MK EG  P  RYALI AGD EKE  LCGHSEKLAMA+GILNLP G+T+RV KNLRVC DC
Sbjct: 1131 MKNEGHSPKMRYALINAGDMEKEVALCGHSEKLAMAFGILNLPSGRTIRVAKNLRVCDDC 1190

Query: 545  HEMAKFMSKMFAKEIVLRDSNRFHHFKDGRCSCRGYW 435
            HEMAKFMSK   +EI+LRDSNRFHHFKDG CSCR +W
Sbjct: 1191 HEMAKFMSKTTRREIILRDSNRFHHFKDGFCSCRDFW 1227


>gb|ACD56635.1| putative pentatricopeptide repeat protein [Gossypium raimondii]
          Length = 667

 Score =  158 bits (399), Expect = 1e-36
 Identities = 73/97 (75%), Positives = 81/97 (83%)
 Frame = -2

Query: 725 MKEEGCLPDNRYALIIAGDTEKEEVLCGHSEKLAMAYGILNLPYGKTVRVTKNLRVCGDC 546
           MKEEG  P  +YALI A + +KE  LCGHSEKLAMA+G+L LP  KT+RVTKNLRVCGDC
Sbjct: 571 MKEEGYFPKTKYALINADEMQKEMALCGHSEKLAMAFGLLTLPPRKTIRVTKNLRVCGDC 630

Query: 545 HEMAKFMSKMFAKEIVLRDSNRFHHFKDGRCSCRGYW 435
           HEMAKFMSK   +EIVLRDSNRFHHFKDG CSCRG+W
Sbjct: 631 HEMAKFMSKETRREIVLRDSNRFHHFKDGYCSCRGFW 667