BLASTX nr result

ID: Coptis21_contig00026649 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00026649
         (596 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK49153.1| unknown [Lotus japonicus]                               76   4e-12
ref|XP_002299156.1| predicted protein [Populus trichocarpa] gi|2...    75   9e-12
ref|XP_002513432.1| conserved hypothetical protein [Ricinus comm...    75   1e-11
ref|NP_187821.1| Emsy N Terminus and plant Tudor-like domain-con...    74   1e-11
ref|XP_002884886.1| hypothetical protein ARALYDRAFT_478573 [Arab...    74   1e-11

>gb|AFK49153.1| unknown [Lotus japonicus]
          Length = 178

 Score = 76.3 bits (186), Expect = 4e-12
 Identities = 43/90 (47%), Positives = 56/90 (62%), Gaps = 1/90 (1%)
 Frame = +1

Query: 136 DVDSQLHSIELEAYTAVLRALTAQGGP-TWEQIENLIPLRKELRISDAEHRELRAKVQSD 312
           D++ Q+H+IELEAYT+VLRA  AQ    TWE    +  LRKELR+SD EHREL  +V  D
Sbjct: 49  DMEIQIHNIELEAYTSVLRAFKAQSDSLTWEIQGLITELRKELRVSDEEHRELLPRVNGD 108

Query: 313 DSVIMIRQCRQGMVGEKELHSNNINVSPSV 402
           D +  IR+ R+G      L    +N +P V
Sbjct: 109 DVIRRIREWRKG----SGLQPGTVNTAPQV 134


>ref|XP_002299156.1| predicted protein [Populus trichocarpa] gi|222846414|gb|EEE83961.1|
           predicted protein [Populus trichocarpa]
          Length = 399

 Score = 75.1 bits (183), Expect = 9e-12
 Identities = 38/71 (53%), Positives = 52/71 (73%), Gaps = 1/71 (1%)
 Frame = +1

Query: 136 DVDSQLHSIELEAYTAVLRALTAQGGP-TWEQIENLIPLRKELRISDAEHRELRAKVQSD 312
           D+++Q+H+IE EAYT+VLRA  AQ    TWE+   +  LRKELR+SD EHREL A+V +D
Sbjct: 49  DMETQIHNIEQEAYTSVLRAFKAQSDAITWEKESLITELRKELRVSDEEHRELLARVNAD 108

Query: 313 DSVIMIRQCRQ 345
           D +  IR+ R+
Sbjct: 109 DMIRRIREWRK 119


>ref|XP_002513432.1| conserved hypothetical protein [Ricinus communis]
           gi|223547340|gb|EEF48835.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 402

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 38/71 (53%), Positives = 52/71 (73%), Gaps = 1/71 (1%)
 Frame = +1

Query: 136 DVDSQLHSIELEAYTAVLRALTAQGGP-TWEQIENLIPLRKELRISDAEHRELRAKVQSD 312
           D+++Q+H+IE EAYT+VLRA  AQ    TWE+   +  LRKELR+SD EHREL ++V SD
Sbjct: 42  DMETQIHNIEQEAYTSVLRAFKAQSDAITWEKESLITELRKELRVSDEEHRELLSRVNSD 101

Query: 313 DSVIMIRQCRQ 345
           D +  IR+ R+
Sbjct: 102 DIIRRIREWRK 112


>ref|NP_187821.1| Emsy N Terminus and plant Tudor-like domain-containing protein
           [Arabidopsis thaliana] gi|30682067|ref|NP_850568.1| Emsy
           N Terminus and plant Tudor-like domain-containing
           protein [Arabidopsis thaliana]
           gi|12322022|gb|AAG51060.1|AC069473_22 unknown protein;
           11168-13185 [Arabidopsis thaliana]
           gi|27754266|gb|AAO22586.1| unknown protein [Arabidopsis
           thaliana] gi|110740796|dbj|BAE98495.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|332641634|gb|AEE75155.1| Emsy N Terminus and plant
           Tudor-like domain-containing protein [Arabidopsis
           thaliana] gi|332641635|gb|AEE75156.1| Emsy N Terminus
           and plant Tudor-like domain-containing protein
           [Arabidopsis thaliana]
          Length = 327

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 42/93 (45%), Positives = 58/93 (62%), Gaps = 1/93 (1%)
 Frame = +1

Query: 139 VDSQLHSIELEAYTAVLRALTAQGGP-TWEQIENLIPLRKELRISDAEHRELRAKVQSDD 315
           +++Q+H +E EAYTAVLRA  AQ    +WE+   +  LRKELR+SD EHREL ++V  DD
Sbjct: 1   METQIHQLEQEAYTAVLRAFKAQSDAISWEKESLITELRKELRVSDDEHRELLSRVNKDD 60

Query: 316 SVIMIRQCRQGMVGEKELHSNNINVSPSVVLMS 414
           ++  IR  RQG   +   H+    + P  VL S
Sbjct: 61  TIQRIRDWRQGGASQITRHA---TIQPFDVLPS 90


>ref|XP_002884886.1| hypothetical protein ARALYDRAFT_478573 [Arabidopsis lyrata subsp.
           lyrata] gi|297330726|gb|EFH61145.1| hypothetical protein
           ARALYDRAFT_478573 [Arabidopsis lyrata subsp. lyrata]
          Length = 328

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 45/111 (40%), Positives = 62/111 (55%), Gaps = 1/111 (0%)
 Frame = +1

Query: 139 VDSQLHSIELEAYTAVLRALTAQGGP-TWEQIENLIPLRKELRISDAEHRELRAKVQSDD 315
           +++Q+H +E EAYTAVLRA  AQ    +WE+   +  LRKEL +SD EHREL ++V  DD
Sbjct: 1   METQIHQLEQEAYTAVLRAFKAQSDAISWEKESLITELRKELGVSDDEHRELLSRVNKDD 60

Query: 316 SVIMIRQCRQGMVGEKELHSNNINVSPSVVLMSRVLPPRD*KLCMFLCHHP 468
           ++  IR  RQG   +   H+    + P  VL S        K   F  +HP
Sbjct: 61  TIQRIRDWRQGGGSQNTRHA---TIQPFDVLPSPTFSAGRKKQKTFQSYHP 108


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