BLASTX nr result

ID: Coptis21_contig00026637 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00026637
         (817 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19591.3| unnamed protein product [Vitis vinifera]              112   1e-22
ref|XP_002282159.2| PREDICTED: B3 domain-containing protein Os01...   109   8e-22
ref|XP_004147830.1| PREDICTED: B3 domain-containing protein Os01...   101   2e-19
ref|XP_003589277.1| B3 domain-containing protein [Medicago trunc...    94   5e-17
ref|XP_002510291.1| conserved hypothetical protein [Ricinus comm...    92   2e-16

>emb|CBI19591.3| unnamed protein product [Vitis vinifera]
          Length = 604

 Score =  112 bits (279), Expect = 1e-22
 Identities = 67/197 (34%), Positives = 98/197 (49%), Gaps = 6/197 (3%)
 Frame = +2

Query: 179 VNLSGKKRGRPPKQFVASTHQCQSKAPLEDPGESGLEEVALESNKREDTVSSSCKRCLQV 358
           + +SGKK  +        THQ      ++  G S    V+  S    +   S+ +     
Sbjct: 410 LGVSGKKGSK--------THQDTVPNEMKKHGSSSKSSVSSASKACNEKPESAIQNTTSA 461

Query: 359 KGNLLS--RGLLTEEEANLWKNTMSFTSNVPHFMRCLSTSTVRTSHVLRIPTDFAKAHFP 532
             +L S  +  ++   A   K   SFTS+ P+F R +    +  S+ L+IP  F+ AH P
Sbjct: 462 ADDLRSQAKSFVSTISAEEEKAVRSFTSSYPYFARFMKKFNISGSYTLKIPYQFSMAHLP 521

Query: 533 KCNTEVVLEGCGGKACTVNFISGK----TNAFCGGWAAFVHGNQLEPGDICLFELVGKLK 700
           KC TE+VL    G+  TVN +        + FCGGW AFV GN ++ GDIC+FELVGK +
Sbjct: 522 KCKTEIVLRNLKGECWTVNSVPDTKGRMVHTFCGGWMAFVRGNDVKMGDICMFELVGKSE 581

Query: 701 MCVHIFRICQTSQAHES 751
           M VHI  + +    H+S
Sbjct: 582 MLVHISGVGKKGSDHQS 598



 Score = 98.2 bits (243), Expect = 2e-18
 Identities = 70/178 (39%), Positives = 93/178 (52%), Gaps = 4/178 (2%)
 Frame = +2

Query: 194 KKRGRPPKQFVASTHQCQSKAPLEDPGESGLEEVALESNKREDTVSSSCKRCLQVKGNLL 373
           KK G P K  ++S    Q KA  E P      E A++S + +D   S  + C     +LL
Sbjct: 196 KKCGSPSKDSLSSMPS-QLKACNEKP------EAAIQS-RADDEFDSRARGCGCT--SLL 245

Query: 374 SRGLLTEEEANLWKNTMSFTSNVPHFMRCLSTSTVRTSHVLRIPTDFAKAHFPKCNTEVV 553
           S    T EE    K   SFTS+ P+F+R +    +  S+ L+IP  F+  H PKC  ++V
Sbjct: 246 S----TFEEK---KVAQSFTSSFPNFVRIMKKFNISGSYTLKIPYKFSMEHLPKCKIKIV 298

Query: 554 LEGCGGKACTVNFISGKT----NAFCGGWAAFVHGNQLEPGDICLFELVGKLKMCVHI 715
           L    G   TVN +        + FCGGW AFV GN L+ GDIC+FELV K +M VHI
Sbjct: 299 LRNLKGDCWTVNSVPTTKVHTLHTFCGGWMAFVRGNGLKMGDICIFELVRKCEMRVHI 356


>ref|XP_002282159.2| PREDICTED: B3 domain-containing protein Os01g0723500-like [Vitis
           vinifera]
          Length = 176

 Score =  109 bits (272), Expect = 8e-22
 Identities = 70/190 (36%), Positives = 93/190 (48%), Gaps = 4/190 (2%)
 Frame = +2

Query: 194 KKRGRPPKQFVASTHQCQSKAPLEDPGESGLEEVALESNKREDTVSSSCKRCLQVKGNLL 373
           KK G   K  V+S     SKA  E P     E     +    D + S  K  +       
Sbjct: 2   KKHGSSSKSSVSSA----SKACNEKP-----ESAIQNTTSAADDLRSQAKSFVST----- 47

Query: 374 SRGLLTEEEANLWKNTMSFTSNVPHFMRCLSTSTVRTSHVLRIPTDFAKAHFPKCNTEVV 553
              +  EEE    K   SFTS+ P+F R +    +  S+ L+IP  F+ AH PKC TE+V
Sbjct: 48  ---ISAEEE----KAVRSFTSSYPYFARFMKKFNISGSYTLKIPYQFSMAHLPKCKTEIV 100

Query: 554 LEGCGGKACTVNFISGK----TNAFCGGWAAFVHGNQLEPGDICLFELVGKLKMCVHIFR 721
           L    G+  TVN +        + FCGGW AFV GN ++ GDIC+FELVGK +M VHI  
Sbjct: 101 LRNLKGECWTVNSVPDTKGRMVHTFCGGWMAFVRGNDVKMGDICMFELVGKSEMLVHISG 160

Query: 722 ICQTSQAHES 751
           + +    H+S
Sbjct: 161 VGKKGSDHQS 170


>ref|XP_004147830.1| PREDICTED: B3 domain-containing protein Os01g0723500-like [Cucumis
           sativus]
          Length = 580

 Score =  101 bits (251), Expect = 2e-19
 Identities = 47/108 (43%), Positives = 68/108 (62%), Gaps = 4/108 (3%)
 Frame = +2

Query: 413 KNTMSFTSNVPHFMRCLSTSTVRTSHVLRIPTDFAKAHFPKCNTEVVLEGCGGKACTVNF 592
           K + +F+SN P+F+R + +  VR S+ L IP  F+ AH P C  ++VL    G++ TVN 
Sbjct: 207 KVSQTFSSNFPYFVRIMKSFNVRGSYTLNIPYKFSMAHLPSCKLKLVLHNLKGESWTVNS 266

Query: 593 ISGK----TNAFCGGWAAFVHGNQLEPGDICLFELVGKLKMCVHIFRI 724
           +       ++  CGGW AFV GN +  GDIC+FELV   ++CVHIFR+
Sbjct: 267 VPTTRVHTSHTLCGGWMAFVRGNDINMGDICVFELVRDCELCVHIFRV 314



 Score = 94.0 bits (232), Expect = 4e-17
 Identities = 52/130 (40%), Positives = 71/130 (54%), Gaps = 10/130 (7%)
 Frame = +2

Query: 356 VKGNLLS------RGLLTEEEANLWKNTMSFTSNVPHFMRCLSTSTVRTSHVLRIPTDFA 517
           VKG+L+       R +L  +E    K   SF S  P F+R +       S+ L+IP  F+
Sbjct: 422 VKGDLILPARPGLRAMLARDEERAAK---SFVSCFPSFVRIMKKFNTSGSYTLKIPHQFS 478

Query: 518 KAHFPKCNTEVVLEGCGGKACTVNFISGKT----NAFCGGWAAFVHGNQLEPGDICLFEL 685
            AHFP   TE+VL G  G   TVN +        + FCGGW +FV  N ++ GDIC+FEL
Sbjct: 479 SAHFPNIRTEIVLRGPNGGCWTVNSVPDSMGRMMHTFCGGWMSFVRDNGIQMGDICIFEL 538

Query: 686 VGKLKMCVHI 715
           VGK ++ VH+
Sbjct: 539 VGKCELYVHV 548


>ref|XP_003589277.1| B3 domain-containing protein [Medicago truncatula]
           gi|355478325|gb|AES59528.1| B3 domain-containing protein
           [Medicago truncatula]
          Length = 368

 Score = 93.6 bits (231), Expect = 5e-17
 Identities = 69/199 (34%), Positives = 98/199 (49%), Gaps = 5/199 (2%)
 Frame = +2

Query: 137 ESSCKRTGRPPK-KLVNLSGKKRGRPPKQFVASTHQCQSKAPLEDPGESGLEEVALESNK 313
           +++ KRT + P  ++  +  KKRGRPPK               +D GE  L +  L +  
Sbjct: 182 QTTSKRTKKKPVIEVTPVQTKKRGRPPKS--------------DDSGEKLLRD--LVACN 225

Query: 314 REDTVSSSCKRCLQVKGNLLSRGLLTEEEANLWKNTMSFTSNVPHFMRCLSTSTVRTSHV 493
           +E + +S+  R            +  E+E  + +   SFTS+ P+F++ L    V  S  
Sbjct: 226 KEHSEASTLDR------------IRKEDEKKIAE---SFTSSFPYFVKILKAGNVGGSRT 270

Query: 494 LRIPTDFAKAHFPKCNTEVVLEGCGGKACTVNFI---SGK-TNAFCGGWAAFVHGNQLEP 661
           LRIP  F+ AH P    EV L    GK  TVN +    GK  ++FCGGW AFV  N +  
Sbjct: 271 LRIPYHFSAAHLPDFKIEVTLRNSKGKCWTVNSVPCAKGKIIHSFCGGWMAFVRDNGVNF 330

Query: 662 GDICLFELVGKLKMCVHIF 718
           GD C+FELV    M V+IF
Sbjct: 331 GDTCIFELVTNYVMQVYIF 349


>ref|XP_002510291.1| conserved hypothetical protein [Ricinus communis]
           gi|223550992|gb|EEF52478.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 567

 Score = 91.7 bits (226), Expect = 2e-16
 Identities = 45/101 (44%), Positives = 63/101 (62%), Gaps = 4/101 (3%)
 Frame = +2

Query: 425 SFTSNVPHFMRCLSTSTVRTSHVLRIPTDFAKAHFPKCNTEVVLEGCGGKACTVNFI--- 595
           SFTS  P+F+R +    +  S+ L+IP  F+ AH P   TE++L    G+  TVN +   
Sbjct: 455 SFTSGFPNFVRIMRKFNISGSYTLKIPHQFSAAHLPNYKTEIILRNSHGERWTVNSVPDS 514

Query: 596 SGKT-NAFCGGWAAFVHGNQLEPGDICLFELVGKLKMCVHI 715
            G+T + FCGGW AFV  N ++ GDIC+FELV + +M VHI
Sbjct: 515 KGRTVHTFCGGWMAFVRDNDVKEGDICMFELVTECEMLVHI 555



 Score = 87.0 bits (214), Expect = 4e-15
 Identities = 64/193 (33%), Positives = 92/193 (47%), Gaps = 7/193 (3%)
 Frame = +2

Query: 167 PKKLVNLSGKKRGRPPKQFVASTHQCQSKAPLEDPGESGLEEVALESNKREDTVSSSCKR 346
           PKK+      KRG+     +  T QC S  P ++   S    +  E    +  V+   KR
Sbjct: 159 PKKV------KRGQEESS-LHETKQCWS--PCQNTAASSRLNICHEILDPKAEVAIQ-KR 208

Query: 347 CLQVKGNLLSRG---LLTEEEANLWKNTMSFTSNVPHFMRCLSTSTVRTSHVLRIPTDFA 517
             +   NL  RG   +  E E  +     SF S  P+F+R +    +  S+ L IP  F+
Sbjct: 209 TGKEDRNLADRGYGSIFLEREKRV---AQSFISCFPYFVRIMKRFNISGSYTLNIPYQFS 265

Query: 518 KAHFPKCNTEVVLEGCGGKACTVNFISGK----TNAFCGGWAAFVHGNQLEPGDICLFEL 685
            AH P   TE+VL    G   TVN +       ++ FCGGW AFV  N ++ GD+C+FEL
Sbjct: 266 TAHLPSSKTEIVLRTIKGACWTVNSVPTTRVHTSHTFCGGWMAFVRSNDIKIGDVCIFEL 325

Query: 686 VGKLKMCVHIFRI 724
           V K ++ V I R+
Sbjct: 326 VRKYELRVFILRV 338


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